BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_L17 (875 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g10670.1 68417.m01743 transcription elongation factor-related... 36 0.027 At3g48710.1 68416.m05319 expressed protein putative protein - Ar... 34 0.11 At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 34 0.14 At3g05900.1 68416.m00664 neurofilament protein-related similar t... 34 0.14 At5g24880.1 68418.m02946 expressed protein ; expression supporte... 33 0.19 At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 32 0.44 At1g44810.1 68414.m05133 expressed protein contains Pfam profil... 32 0.44 At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containi... 31 0.76 At5g53750.1 68418.m06679 expressed protein strong similarity to ... 30 1.8 At5g41320.1 68418.m05022 expressed protein 30 1.8 At4g07520.1 68417.m01174 hypothetical protein contains Pfam prof... 30 1.8 At3g51070.1 68416.m05592 dehydration-responsive protein-related ... 30 1.8 At1g69070.1 68414.m07903 expressed protein 30 1.8 At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related... 30 2.3 At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 29 3.1 At3g57300.1 68416.m06378 transcriptional activator, putative sim... 29 3.1 At2g12875.1 68415.m01402 hypothetical protein 29 3.1 At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 29 4.1 At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 29 4.1 At1g56660.1 68414.m06516 expressed protein 29 4.1 At3g47270.1 68416.m05135 hypothetical protein similar to At2g049... 29 5.4 At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein lo... 29 5.4 At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 29 5.4 At1g29240.1 68414.m03576 expressed protein contains Pfam profile... 29 5.4 At5g03710.1 68418.m00331 hypothetical protein 28 7.1 At3g19370.1 68416.m02457 expressed protein 28 7.1 At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase famil... 28 7.1 At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase famil... 28 7.1 At5g66540.1 68418.m08389 expressed protein ; supported by full-L... 28 9.4 At5g27160.1 68418.m03241 hypothetical protein contains Pfam prof... 28 9.4 At5g18475.1 68418.m02177 pentatricopeptide (PPR) repeat-containi... 28 9.4 At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) fa... 28 9.4 At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 28 9.4 >At4g10670.1 68417.m01743 transcription elongation factor-related low similarity to chromatin-specific transcription elongation factor FACT 140 kDa subunit [Homo sapiens] GI:5499741 Length = 470 Score = 36.3 bits (80), Expect = 0.027 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%) Frame = -3 Query: 327 SPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEM----ISE 160 S +G EP + ES E+EDE S + DE + +D+ E+E++KG + E Sbjct: 365 SDKGYEPSDVEVES--ESEDETSESESDDEEEEEDSEQESEEEKGKTWAELEREATNADR 422 Query: 159 DEGNEMFSEEDKPK 118 + G E SEE++ + Sbjct: 423 EHGVESDSEEERKR 436 >At3g48710.1 68416.m05319 expressed protein putative protein - Arabidopsis thaliana, EMBL:AL078465.1 Length = 462 Score = 34.3 bits (75), Expect = 0.11 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = -3 Query: 348 RERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLE---GLD 178 +E+P GE + +E +++ E P + NKS+DT E EKDK E D Sbjct: 244 QEQPTETEGNGESDVG--SEGTNDSNGEDDVAPEEENNKSEDTETEDEKDKAKEKTKSTD 301 Query: 177 TEMISEDEGNEMFSEEDKPKSVGA 106 + +S+ E + E++ G+ Sbjct: 302 KKRLSKRTKKEKPAAEEEKSIKGS 325 >At5g55660.1 68418.m06940 expressed protein similar to unknown protein (pir||T08929) Length = 778 Score = 33.9 bits (74), Expect = 0.14 Identities = 21/67 (31%), Positives = 37/67 (55%) Frame = -3 Query: 315 EEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFS 136 E+ +E T+ ++E E E T DEN+ K+ E EK+ E +D + ++E N+ Sbjct: 221 EDDVEADTK-VAEPEVEDKKTESKDENEDKEEEKEDEKE---ESMDDKEDEKEESNDDDK 276 Query: 135 EEDKPKS 115 E++K +S Sbjct: 277 EDEKEES 283 >At3g05900.1 68416.m00664 neurofilament protein-related similar to NF-180 (GI:632549) [Petromyzon marinus] similar to Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H) (Swiss-Prot:P12036) [Homo sapiens] Length = 673 Score = 33.9 bits (74), Expect = 0.14 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = -3 Query: 315 EEPLEKMTESISETEDERSYTPCLDENKSKDTS---LETEKDKGLEGLDTEMISED 157 EEPL+ E++SE +D + DEN KDT E + ++ L+ DTE + ++ Sbjct: 531 EEPLKDEQENVSEAKDVVTKLAAEDENIKKDTDTPVAEGKSEETLKETDTESVEKE 586 >At5g24880.1 68418.m02946 expressed protein ; expression supported by MPSS Length = 443 Score = 33.5 bits (73), Expect = 0.19 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = -3 Query: 327 SPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGN 148 +P + K ES+ ET E+ +E K + E EK+K E E + E+E Sbjct: 314 TPEKVDTESKEVESVEETTQEKE-EEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKE 372 Query: 147 EMFSEEDKPK 118 ++ +E+K K Sbjct: 373 KVKGDEEKEK 382 Score = 30.7 bits (66), Expect = 1.3 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 3/74 (4%) Frame = -3 Query: 330 VSPRGEEPLEKMTESISETEDERSYTPCLDENKSKD-TSLETEKDKGLEGLDTEMISE-- 160 + + EE E+ +++E+E +DEN++ + E+++ + +E E E Sbjct: 281 IEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVK 340 Query: 159 DEGNEMFSEEDKPK 118 +EG E EE+K K Sbjct: 341 EEGKERVEEEEKEK 354 >At1g79280.1 68414.m09242 expressed protein weak similarity to Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens] Length = 2111 Score = 32.3 bits (70), Expect = 0.44 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%) Frame = -3 Query: 315 EEPLEKM---TESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNE 145 +EP+E+ TE+I E+ R T +EN+ T +E++K++G LDT + +EG + Sbjct: 1866 DEPVEESPTETETIPTEEESRDQTE--EENQEPLTDMESDKEEGELDLDT-LEDLEEGTD 1922 Query: 144 MFSEEDKPK 118 + S P+ Sbjct: 1923 VASMMRSPE 1931 >At1g44810.1 68414.m05133 expressed protein contains Pfam profile: PF04504 protein of unknown function, DUF573 Length = 296 Score = 32.3 bits (70), Expect = 0.44 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = -3 Query: 303 EKMTESISETEDERSY----TPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFS 136 E + E IS EDE+ + + +EN+ KD S +T L TE + D G+E S Sbjct: 19 EDVDEEISSGEDEKEHISNSSSSEEENELKDLSTQT-----LNSPSTEAPTLDSGSETNS 73 Query: 135 EEDKP 121 + DKP Sbjct: 74 DSDKP 78 >At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 823 Score = 31.5 bits (68), Expect = 0.76 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = +3 Query: 498 ASASVHLLGRYRARANFRSLF--VPXRDEGIW 587 A++ +HL RY+A N R LF +P RD G W Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSW 219 >At5g53750.1 68418.m06679 expressed protein strong similarity to unknown protein (pir||T08938) Length = 427 Score = 30.3 bits (65), Expect = 1.8 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Frame = +2 Query: 275 VSLIDSVIFSSGSSPRGDTEAGRSRSPGS-DVSEXGLLRVIRFMRSLQHITARYSSVIFY 451 +SLIDS+ SSGSS ++ AG++R S S R+ R +S+ + R SS++ Sbjct: 309 ISLIDSLSLSSGSSSDEESPAGKTRMTSSYGRSVSSAARMAR--KSVAIVCNRKSSLMAV 366 Query: 452 VFTSVGCRLA 481 + ++ R++ Sbjct: 367 MIQAIAHRVS 376 >At5g41320.1 68418.m05022 expressed protein Length = 515 Score = 30.3 bits (65), Expect = 1.8 Identities = 12/45 (26%), Positives = 22/45 (48%) Frame = -3 Query: 348 RERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSL 214 RE+P R + E E + + + T C+++NK KD ++ Sbjct: 57 REQPVKTRKRRSKKDETKPEKVKQVRKRKPKTVCVEDNKKKDETV 101 >At4g07520.1 68417.m01174 hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287 Length = 734 Score = 30.3 bits (65), Expect = 1.8 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -3 Query: 330 VSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEG 151 V+P E ++ I E + R +ENK +D + E E K L + E ISE+ Sbjct: 7 VTPSSSESEDERVTIIREADMNREEVAA-EENKFEDENCEQEPPKNLHEPEEEKISEEVD 65 Query: 150 NE 145 +E Sbjct: 66 DE 67 >At3g51070.1 68416.m05592 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase Length = 895 Score = 30.3 bits (65), Expect = 1.8 Identities = 17/66 (25%), Positives = 28/66 (42%) Frame = -3 Query: 321 RGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEM 142 + E+ K + SET ++ T +N S E EKD G E + E + ++ Sbjct: 100 KSEDEQRKSAKEKSETTSSKTQTQETQQNNDDKISEEKEKDNGKENQTVQESEEGQMKKV 159 Query: 141 FSEEDK 124 E +K Sbjct: 160 VKEFEK 165 >At1g69070.1 68414.m07903 expressed protein Length = 901 Score = 30.3 bits (65), Expect = 1.8 Identities = 24/77 (31%), Positives = 35/77 (45%) Frame = -3 Query: 348 RERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEM 169 R RP+ + EE +K E + E+ER E S D E ++ + L T + Sbjct: 266 RARPSERTKTPEEIAQKEREKLEALEEERKKRMQETEELS-DGDEEIGGEESTKRL-TVI 323 Query: 168 ISEDEGNEMFSEEDKPK 118 +D G+ EEDKPK Sbjct: 324 SGDDLGDSFSVEEDKPK 340 >At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related similar to storekeeper protein GI:14268476 [Solanum tuberosum] Length = 328 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/76 (23%), Positives = 35/76 (46%) Frame = -3 Query: 345 ERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMI 166 ++P+ V+ ++PLE + + SE E+E + + ++ E+E D E + Sbjct: 63 KKPSGVTSPVKKPLEAVASTSSEEEEED------EPSSDSESGSESESDTEAEPMTLAAA 116 Query: 165 SEDEGNEMFSEEDKPK 118 + NE E KP+ Sbjct: 117 APSSSNEKRQSEGKPE 132 >At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287 Length = 715 Score = 29.5 bits (63), Expect = 3.1 Identities = 16/62 (25%), Positives = 29/62 (46%) Frame = -3 Query: 309 PLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFSEE 130 P ++ + ET R+ P L E ++ E +++ E + E E+EG E EE Sbjct: 53 PTKETAPATKETAPTRTEEPSLTEQDPENVEEEESEEEEKEEEEKEEEEEEEGEEEEEEE 112 Query: 129 DK 124 ++ Sbjct: 113 EE 114 >At3g57300.1 68416.m06378 transcriptional activator, putative similar to transcriptional activator SRCAP [Homo sapiens] GI:5106572; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain Length = 1507 Score = 29.5 bits (63), Expect = 3.1 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -3 Query: 240 ENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFSEEDKPKS 115 + K+K ++ E D LE L+ ++ +D G E E +KPKS Sbjct: 1399 KKKTKRIRIDAEGDATLEELE-DVDRQDNGQEPLEEPEKPKS 1439 >At2g12875.1 68415.m01402 hypothetical protein Length = 325 Score = 29.5 bits (63), Expect = 3.1 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -3 Query: 315 EEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNE 145 EEP+ +T + E+E+SY +E KD ++E+++ E E E+E E Sbjct: 182 EEPILALTPVLEAVEEEKSYKN-EEEKSEKDEEEKSEEEESEEEEKEEEEKEEEKEE 237 >At5g22650.2 68418.m02647 expressed protein non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4; Length = 223 Score = 29.1 bits (62), Expect = 4.1 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -3 Query: 342 RPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGL--DTEM 169 +PA P +E E E SE +D+ +DE+ S D E +D+ E E Sbjct: 63 KPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEP 122 Query: 168 ISEDEGNEMFSE 133 I++ NE S+ Sbjct: 123 INKKRPNESVSK 134 >At5g22650.1 68418.m02646 expressed protein non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4; Length = 306 Score = 29.1 bits (62), Expect = 4.1 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -3 Query: 342 RPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGL--DTEM 169 +PA P +E E E SE +D+ +DE+ S D E +D+ E E Sbjct: 146 KPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEP 205 Query: 168 ISEDEGNEMFSE 133 I++ NE S+ Sbjct: 206 INKKRPNESVSK 217 >At1g56660.1 68414.m06516 expressed protein Length = 522 Score = 29.1 bits (62), Expect = 4.1 Identities = 20/78 (25%), Positives = 34/78 (43%) Frame = -3 Query: 351 DRERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTE 172 D E+ +E EK ++ + E + S C +E K K + EKD+ E D + Sbjct: 228 DEEKKKEHDETDQEMKEKDSKKNKKKEKDES---CAEEKKKKPDKEKKEKDESTEKEDKK 284 Query: 171 MISEDEGNEMFSEEDKPK 118 + + E +ED+ K Sbjct: 285 LKGKKGKGEKPEKEDEGK 302 >At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970, At2g15200, At1g32830, At2g14140, At3g30450, At4g03990, At5g34895, At2g02200 Length = 671 Score = 28.7 bits (61), Expect = 5.4 Identities = 19/64 (29%), Positives = 35/64 (54%) Frame = -3 Query: 315 EEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFS 136 EE +E+ E ETED+++Y L +++ T+ TEK+ + +T + ++E E Sbjct: 435 EENVEEHDEH-DETEDQKAYV-ILSDDEDNGTA-PTEKESQPQKEETTEVPKEENVEEHD 491 Query: 135 EEDK 124 E D+ Sbjct: 492 EHDE 495 >At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein low similarity to Rab6 GTPase activating protein, GAPCenA [Homo sapiens] GI:12188746; contains Pfam profile PF00566: TBC domain Length = 882 Score = 28.7 bits (61), Expect = 5.4 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Frame = -3 Query: 282 SETEDERSYTPCLDENKSKDTSLETEK---DKGLEGLDTEMISEDEGNEMFSEEDKPKSV 112 SE + E+ T + + SK+T E DK L DTE + ++E + S++DK SV Sbjct: 107 SEQQLEQDRTETVGD-VSKETEPAEEALVLDKSLRS-DTESVKDEEEEKFESDKDKESSV 164 Query: 111 GA 106 G+ Sbjct: 165 GS 166 >At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 protein GI:1279562 from [Medicago sativa] Length = 557 Score = 28.7 bits (61), Expect = 5.4 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = -3 Query: 279 ETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFSEEDKPKSVGA 106 E ED+ L + K KD +K+K ++ + ++ S D+ + EE+K K V A Sbjct: 26 EPEDDIDTKVSLKKQK-KDVIAAVQKEKAVKKVPKKVESSDDSDSESEEEEKAKKVPA 82 >At1g29240.1 68414.m03576 expressed protein contains Pfam profile: PF05097 protein of unknown function (DUF688) Length = 577 Score = 28.7 bits (61), Expect = 5.4 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Frame = -3 Query: 273 EDERSYTPCLDENKSKD---TSLETEKDKGLEGLDTEMISEDEGNEMFSE 133 E+E+ +TPCL K+ D T L++ K K +E S+D+ +++FS+ Sbjct: 93 EEEQVFTPCLPPGKAVDANMTRLQSSKGKQVEE------SDDDEDDVFSD 136 >At5g03710.1 68418.m00331 hypothetical protein Length = 81 Score = 28.3 bits (60), Expect = 7.1 Identities = 19/67 (28%), Positives = 32/67 (47%) Frame = -3 Query: 318 GEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMF 139 GEE E+ E E E+E +E + ++ E E+++ E + E E+E E Sbjct: 5 GEEEEEEEEEEEEEEEEEEEEEE-EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63 Query: 138 SEEDKPK 118 EED+ + Sbjct: 64 EEEDRER 70 >At3g19370.1 68416.m02457 expressed protein Length = 704 Score = 28.3 bits (60), Expect = 7.1 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = -3 Query: 327 SPRGEEPLEKMTESISETEDERSYTPCLDENKSK-DTSLETEKDKGLEGLDTEM 169 S +E +K+ ES+ + + + L ENK K + +ETEK E LDT++ Sbjct: 480 SDEKQELRKKLEESVEKIRNLEAEMKTLRENKEKVEAEMETEKSM-KEDLDTKL 532 >At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase family protein similar to Pyrrolidone-carboxylate peptidase (Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains Prosite PS00141: Eukaryotic and viral aspartyl proteases active site Length = 94 Score = 28.3 bits (60), Expect = 7.1 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = -3 Query: 315 EEPLEKMTESISETEDERSYTP--CLDENKSKDTSLETEKDKGLEGLDTEMISEDEGN 148 E P EK+ + ++R CL DT+ E K K E L++ ++S D+ N Sbjct: 24 ENPTEKIANGLKSYVEKRGLPSGLCLGSCSVLDTAGEGAKSKLYEVLESSVVSGDKNN 81 >At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase family protein similar to Pyrrolidone-carboxylate peptidase (Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains Prosite PS00141: Eukaryotic and viral aspartyl proteases active site Length = 217 Score = 28.3 bits (60), Expect = 7.1 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = -3 Query: 315 EEPLEKMTESISETEDERSYTP--CLDENKSKDTSLETEKDKGLEGLDTEMISEDEGN 148 E P EK+ + ++R CL DT+ E K K E L++ ++S D+ N Sbjct: 24 ENPTEKIANGLKSYVEKRGLPSGLCLGSCSVLDTAGEGAKSKLYEVLESSVVSGDKNN 81 >At5g66540.1 68418.m08389 expressed protein ; supported by full-Length cDNA gi:12057175 from [Arabidopsis thaliana] Length = 524 Score = 27.9 bits (59), Expect = 9.4 Identities = 18/58 (31%), Positives = 27/58 (46%) Frame = -3 Query: 282 SETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFSEEDKPKSVG 109 SE EDE +E + ++ E EKD EG++ + E E F EE + + G Sbjct: 136 SEGEDEEEEEEDEEEEEEEEEEEEEEKDGDNEGIEDKFFKIKELEE-FLEEGEAEEYG 192 >At5g27160.1 68418.m03241 hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287 Length = 702 Score = 27.9 bits (59), Expect = 9.4 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = -3 Query: 330 VSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISED 157 V+P E ++ I E + R +ENK +D + E E + L + E ISE+ Sbjct: 7 VTPSSSESEDRRVTIIREADMNREEVAA-EENKFEDENCEQEPPENLNEPEEEKISEE 63 >At5g18475.1 68418.m02177 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 506 Score = 27.9 bits (59), Expect = 9.4 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -3 Query: 516 SERKQMPSPKPRASLQPTE 460 SE+K+ PSP P +S+ P E Sbjct: 28 SEKKKKPSPPPESSISPVE 46 >At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) family protein / pentatricopeptide (PPR) repeat-containing protein contains Pfam domains PF01535: PPR repeat and PF00097: Zinc finger, C3HC4 type (RING finger) Length = 1208 Score = 27.9 bits (59), Expect = 9.4 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -3 Query: 330 VSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEG 151 V+P E ++ I E + R +ENK +D + E E + L + E ISE+ Sbjct: 432 VTPSSSESEDERVTIIREADMNREEVA--EENKFEDENCEQESPENLNEPEEENISEEGD 489 Query: 150 N 148 N Sbjct: 490 N 490 >At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970, At2g15200, At1g32830, At3g30450, At4g03990, At5g34895, At3g47270, At2g02200 Length = 847 Score = 27.9 bits (59), Expect = 9.4 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 14/96 (14%) Frame = -3 Query: 354 GDRERPASVSPRGEEPLEKMTESI---SETEDERSYTPCL-------DENKSKDTSLETE 205 GD E + EE EK E + + E E+ P +E K ++ E E Sbjct: 472 GDEEMEGEEEKQEEEGKEKEEEKVEYRGDEETEKQEIPKQGDEEMEGEEEKQEEEGKEEE 531 Query: 204 KDK----GLEGLDTEMISEDEGNEMFSEEDKPKSVG 109 ++K G EG + + I + EM EE+K + G Sbjct: 532 EEKVEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEG 567 Score = 27.9 bits (59), Expect = 9.4 Identities = 21/65 (32%), Positives = 30/65 (46%) Frame = -3 Query: 318 GEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMF 139 GEE EK E E E+E+ D + + + ETEK + + D EM E+ E Sbjct: 558 GEE--EKQEEEGKEEEEEKICVEYKDHHSTCNVE-ETEKQENPKQGDEEMEREEGKEEKV 614 Query: 138 SEEDK 124 E D+ Sbjct: 615 EEHDE 619 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,227,268 Number of Sequences: 28952 Number of extensions: 222670 Number of successful extensions: 924 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 831 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 903 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 2058178400 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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