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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L17
         (875 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g10670.1 68417.m01743 transcription elongation factor-related...    36   0.027
At3g48710.1 68416.m05319 expressed protein putative protein - Ar...    34   0.11 
At5g55660.1 68418.m06940 expressed protein similar to unknown pr...    34   0.14 
At3g05900.1 68416.m00664 neurofilament protein-related similar t...    34   0.14 
At5g24880.1 68418.m02946 expressed protein ; expression supporte...    33   0.19 
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu...    32   0.44 
At1g44810.1 68414.m05133 expressed protein  contains Pfam profil...    32   0.44 
At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containi...    31   0.76 
At5g53750.1 68418.m06679 expressed protein strong similarity to ...    30   1.8  
At5g41320.1 68418.m05022 expressed protein                             30   1.8  
At4g07520.1 68417.m01174 hypothetical protein contains Pfam prof...    30   1.8  
At3g51070.1 68416.m05592 dehydration-responsive protein-related ...    30   1.8  
At1g69070.1 68414.m07903 expressed protein                             30   1.8  
At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related...    30   2.3  
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof...    29   3.1  
At3g57300.1 68416.m06378 transcriptional activator, putative sim...    29   3.1  
At2g12875.1 68415.m01402 hypothetical protein                          29   3.1  
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono...    29   4.1  
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono...    29   4.1  
At1g56660.1 68414.m06516 expressed protein                             29   4.1  
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049...    29   5.4  
At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein lo...    29   5.4  
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro...    29   5.4  
At1g29240.1 68414.m03576 expressed protein contains Pfam profile...    29   5.4  
At5g03710.1 68418.m00331 hypothetical protein                          28   7.1  
At3g19370.1 68416.m02457 expressed protein                             28   7.1  
At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase famil...    28   7.1  
At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase famil...    28   7.1  
At5g66540.1 68418.m08389 expressed protein ; supported by full-L...    28   9.4  
At5g27160.1 68418.m03241 hypothetical protein contains Pfam prof...    28   9.4  
At5g18475.1 68418.m02177 pentatricopeptide (PPR) repeat-containi...    28   9.4  
At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) fa...    28   9.4  
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049...    28   9.4  

>At4g10670.1 68417.m01743 transcription elongation factor-related
           low similarity to chromatin-specific transcription
           elongation factor FACT 140 kDa subunit [Homo sapiens]
           GI:5499741
          Length = 470

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
 Frame = -3

Query: 327 SPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEM----ISE 160
           S +G EP +   ES  E+EDE S +   DE + +D+  E+E++KG    + E        
Sbjct: 365 SDKGYEPSDVEVES--ESEDETSESESDDEEEEEDSEQESEEEKGKTWAELEREATNADR 422

Query: 159 DEGNEMFSEEDKPK 118
           + G E  SEE++ +
Sbjct: 423 EHGVESDSEEERKR 436


>At3g48710.1 68416.m05319 expressed protein putative protein -
           Arabidopsis thaliana, EMBL:AL078465.1
          Length = 462

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = -3

Query: 348 RERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLE---GLD 178
           +E+P      GE  +   +E  +++  E    P  + NKS+DT  E EKDK  E     D
Sbjct: 244 QEQPTETEGNGESDVG--SEGTNDSNGEDDVAPEEENNKSEDTETEDEKDKAKEKTKSTD 301

Query: 177 TEMISEDEGNEMFSEEDKPKSVGA 106
            + +S+    E  + E++    G+
Sbjct: 302 KKRLSKRTKKEKPAAEEEKSIKGS 325


>At5g55660.1 68418.m06940 expressed protein similar to unknown
           protein (pir||T08929)
          Length = 778

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 21/67 (31%), Positives = 37/67 (55%)
 Frame = -3

Query: 315 EEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFS 136
           E+ +E  T+ ++E E E   T   DEN+ K+   E EK+   E +D +   ++E N+   
Sbjct: 221 EDDVEADTK-VAEPEVEDKKTESKDENEDKEEEKEDEKE---ESMDDKEDEKEESNDDDK 276

Query: 135 EEDKPKS 115
           E++K +S
Sbjct: 277 EDEKEES 283


>At3g05900.1 68416.m00664 neurofilament protein-related similar to
           NF-180 (GI:632549) [Petromyzon marinus] similar to
           Neurofilament triplet H protein (200 kDa neurofilament
           protein) (Neurofilament heavy polypeptide) (NF-H)
           (Swiss-Prot:P12036) [Homo sapiens]
          Length = 673

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
 Frame = -3

Query: 315 EEPLEKMTESISETEDERSYTPCLDENKSKDTS---LETEKDKGLEGLDTEMISED 157
           EEPL+   E++SE +D  +     DEN  KDT     E + ++ L+  DTE + ++
Sbjct: 531 EEPLKDEQENVSEAKDVVTKLAAEDENIKKDTDTPVAEGKSEETLKETDTESVEKE 586


>At5g24880.1 68418.m02946 expressed protein ; expression supported
           by MPSS
          Length = 443

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = -3

Query: 327 SPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGN 148
           +P   +   K  ES+ ET  E+      +E K +    E EK+K  E    E + E+E  
Sbjct: 314 TPEKVDTESKEVESVEETTQEKE-EEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKE 372

Query: 147 EMFSEEDKPK 118
           ++  +E+K K
Sbjct: 373 KVKGDEEKEK 382



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
 Frame = -3

Query: 330 VSPRGEEPLEKMTESISETEDERSYTPCLDENKSKD-TSLETEKDKGLEGLDTEMISE-- 160
           +  + EE  E+     +++E+E      +DEN++ +    E+++ + +E    E   E  
Sbjct: 281 IEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVK 340

Query: 159 DEGNEMFSEEDKPK 118
           +EG E   EE+K K
Sbjct: 341 EEGKERVEEEEKEK 354


>At1g79280.1 68414.m09242 expressed protein weak similarity to
            Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
          Length = 2111

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = -3

Query: 315  EEPLEKM---TESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNE 145
            +EP+E+    TE+I   E+ R  T   +EN+   T +E++K++G   LDT +   +EG +
Sbjct: 1866 DEPVEESPTETETIPTEEESRDQTE--EENQEPLTDMESDKEEGELDLDT-LEDLEEGTD 1922

Query: 144  MFSEEDKPK 118
            + S    P+
Sbjct: 1923 VASMMRSPE 1931


>At1g44810.1 68414.m05133 expressed protein  contains Pfam profile:
           PF04504 protein of unknown function, DUF573
          Length = 296

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = -3

Query: 303 EKMTESISETEDERSY----TPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFS 136
           E + E IS  EDE+ +    +   +EN+ KD S +T     L    TE  + D G+E  S
Sbjct: 19  EDVDEEISSGEDEKEHISNSSSSEEENELKDLSTQT-----LNSPSTEAPTLDSGSETNS 73

Query: 135 EEDKP 121
           + DKP
Sbjct: 74  DSDKP 78


>At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 823

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +3

Query: 498 ASASVHLLGRYRARANFRSLF--VPXRDEGIW 587
           A++ +HL  RY+A  N R LF  +P RD G W
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSW 219


>At5g53750.1 68418.m06679 expressed protein strong similarity to
           unknown protein (pir||T08938)
          Length = 427

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = +2

Query: 275 VSLIDSVIFSSGSSPRGDTEAGRSRSPGS-DVSEXGLLRVIRFMRSLQHITARYSSVIFY 451
           +SLIDS+  SSGSS   ++ AG++R   S   S     R+ R  +S+  +  R SS++  
Sbjct: 309 ISLIDSLSLSSGSSSDEESPAGKTRMTSSYGRSVSSAARMAR--KSVAIVCNRKSSLMAV 366

Query: 452 VFTSVGCRLA 481
           +  ++  R++
Sbjct: 367 MIQAIAHRVS 376


>At5g41320.1 68418.m05022 expressed protein 
          Length = 515

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -3

Query: 348 RERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSL 214
           RE+P     R  +  E   E + +    +  T C+++NK KD ++
Sbjct: 57  REQPVKTRKRRSKKDETKPEKVKQVRKRKPKTVCVEDNKKKDETV 101


>At4g07520.1 68417.m01174 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 734

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 330 VSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEG 151
           V+P   E  ++    I E +  R      +ENK +D + E E  K L   + E ISE+  
Sbjct: 7   VTPSSSESEDERVTIIREADMNREEVAA-EENKFEDENCEQEPPKNLHEPEEEKISEEVD 65

Query: 150 NE 145
           +E
Sbjct: 66  DE 67


>At3g51070.1 68416.m05592 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 895

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = -3

Query: 321 RGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEM 142
           + E+   K  +  SET   ++ T    +N     S E EKD G E    +   E +  ++
Sbjct: 100 KSEDEQRKSAKEKSETTSSKTQTQETQQNNDDKISEEKEKDNGKENQTVQESEEGQMKKV 159

Query: 141 FSEEDK 124
             E +K
Sbjct: 160 VKEFEK 165


>At1g69070.1 68414.m07903 expressed protein
          Length = 901

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 24/77 (31%), Positives = 35/77 (45%)
 Frame = -3

Query: 348 RERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEM 169
           R RP+  +   EE  +K  E +   E+ER       E  S D   E   ++  + L T +
Sbjct: 266 RARPSERTKTPEEIAQKEREKLEALEEERKKRMQETEELS-DGDEEIGGEESTKRL-TVI 323

Query: 168 ISEDEGNEMFSEEDKPK 118
             +D G+    EEDKPK
Sbjct: 324 SGDDLGDSFSVEEDKPK 340


>At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related
           similar to storekeeper protein GI:14268476 [Solanum
           tuberosum]
          Length = 328

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/76 (23%), Positives = 35/76 (46%)
 Frame = -3

Query: 345 ERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMI 166
           ++P+ V+   ++PLE +  + SE E+E       + +   ++  E+E D   E +     
Sbjct: 63  KKPSGVTSPVKKPLEAVASTSSEEEEED------EPSSDSESGSESESDTEAEPMTLAAA 116

Query: 165 SEDEGNEMFSEEDKPK 118
           +    NE    E KP+
Sbjct: 117 APSSSNEKRQSEGKPE 132


>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 715

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -3

Query: 309 PLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFSEE 130
           P ++   +  ET   R+  P L E   ++   E  +++  E  + E   E+EG E   EE
Sbjct: 53  PTKETAPATKETAPTRTEEPSLTEQDPENVEEEESEEEEKEEEEKEEEEEEEGEEEEEEE 112

Query: 129 DK 124
           ++
Sbjct: 113 EE 114


>At3g57300.1 68416.m06378 transcriptional activator, putative similar
            to transcriptional activator SRCAP [Homo sapiens]
            GI:5106572; contains Pfam profiles PF00271: Helicase
            conserved C-terminal domain, PF00176: SNF2 family
            N-terminal domain
          Length = 1507

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 240  ENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFSEEDKPKS 115
            + K+K   ++ E D  LE L+ ++  +D G E   E +KPKS
Sbjct: 1399 KKKTKRIRIDAEGDATLEELE-DVDRQDNGQEPLEEPEKPKS 1439


>At2g12875.1 68415.m01402 hypothetical protein
          Length = 325

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -3

Query: 315 EEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNE 145
           EEP+  +T  +   E+E+SY    +E   KD   ++E+++  E    E   E+E  E
Sbjct: 182 EEPILALTPVLEAVEEEKSYKN-EEEKSEKDEEEKSEEEESEEEEKEEEEKEEEKEE 237


>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
           splice site at exon 3, AC acceptor splice site at exon
           4;
          Length = 223

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = -3

Query: 342 RPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGL--DTEM 169
           +PA   P  +E  E   E  SE +D+      +DE+ S D   E  +D+  E      E 
Sbjct: 63  KPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEP 122

Query: 168 ISEDEGNEMFSE 133
           I++   NE  S+
Sbjct: 123 INKKRPNESVSK 134


>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
           splice site at exon 3, AC acceptor splice site at exon
           4;
          Length = 306

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = -3

Query: 342 RPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGL--DTEM 169
           +PA   P  +E  E   E  SE +D+      +DE+ S D   E  +D+  E      E 
Sbjct: 146 KPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEP 205

Query: 168 ISEDEGNEMFSE 133
           I++   NE  S+
Sbjct: 206 INKKRPNESVSK 217


>At1g56660.1 68414.m06516 expressed protein
          Length = 522

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/78 (25%), Positives = 34/78 (43%)
 Frame = -3

Query: 351 DRERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTE 172
           D E+        +E  EK ++   + E + S   C +E K K    + EKD+  E  D +
Sbjct: 228 DEEKKKEHDETDQEMKEKDSKKNKKKEKDES---CAEEKKKKPDKEKKEKDESTEKEDKK 284

Query: 171 MISEDEGNEMFSEEDKPK 118
           +  +    E   +ED+ K
Sbjct: 285 LKGKKGKGEKPEKEDEGK 302


>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
           At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
           At5g34895, At2g02200
          Length = 671

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 19/64 (29%), Positives = 35/64 (54%)
 Frame = -3

Query: 315 EEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFS 136
           EE +E+  E   ETED+++Y   L +++   T+  TEK+   +  +T  + ++E  E   
Sbjct: 435 EENVEEHDEH-DETEDQKAYV-ILSDDEDNGTA-PTEKESQPQKEETTEVPKEENVEEHD 491

Query: 135 EEDK 124
           E D+
Sbjct: 492 EHDE 495


>At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein low
           similarity to Rab6 GTPase activating protein, GAPCenA
           [Homo sapiens] GI:12188746; contains Pfam profile
           PF00566: TBC domain
          Length = 882

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = -3

Query: 282 SETEDERSYTPCLDENKSKDTSLETEK---DKGLEGLDTEMISEDEGNEMFSEEDKPKSV 112
           SE + E+  T  + +  SK+T    E    DK L   DTE + ++E  +  S++DK  SV
Sbjct: 107 SEQQLEQDRTETVGD-VSKETEPAEEALVLDKSLRS-DTESVKDEEEEKFESDKDKESSV 164

Query: 111 GA 106
           G+
Sbjct: 165 GS 166


>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
           protein GI:1279562 from [Medicago sativa]
          Length = 557

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -3

Query: 279 ETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFSEEDKPKSVGA 106
           E ED+      L + K KD     +K+K ++ +  ++ S D+ +    EE+K K V A
Sbjct: 26  EPEDDIDTKVSLKKQK-KDVIAAVQKEKAVKKVPKKVESSDDSDSESEEEEKAKKVPA 82


>At1g29240.1 68414.m03576 expressed protein contains Pfam profile:
           PF05097 protein of unknown function (DUF688)
          Length = 577

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = -3

Query: 273 EDERSYTPCLDENKSKD---TSLETEKDKGLEGLDTEMISEDEGNEMFSE 133
           E+E+ +TPCL   K+ D   T L++ K K +E       S+D+ +++FS+
Sbjct: 93  EEEQVFTPCLPPGKAVDANMTRLQSSKGKQVEE------SDDDEDDVFSD 136


>At5g03710.1 68418.m00331 hypothetical protein 
          Length = 81

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = -3

Query: 318 GEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMF 139
           GEE  E+  E   E E+E       +E + ++   E E+++  E  + E   E+E  E  
Sbjct: 5   GEEEEEEEEEEEEEEEEEEEEEE-EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63

Query: 138 SEEDKPK 118
            EED+ +
Sbjct: 64  EEEDRER 70


>At3g19370.1 68416.m02457 expressed protein 
          Length = 704

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -3

Query: 327 SPRGEEPLEKMTESISETEDERSYTPCLDENKSK-DTSLETEKDKGLEGLDTEM 169
           S   +E  +K+ ES+ +  +  +    L ENK K +  +ETEK    E LDT++
Sbjct: 480 SDEKQELRKKLEESVEKIRNLEAEMKTLRENKEKVEAEMETEKSM-KEDLDTKL 532


>At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase family
           protein similar to Pyrrolidone-carboxylate peptidase
           (Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains
           Prosite PS00141: Eukaryotic and viral aspartyl proteases
           active site
          Length = 94

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = -3

Query: 315 EEPLEKMTESISETEDERSYTP--CLDENKSKDTSLETEKDKGLEGLDTEMISEDEGN 148
           E P EK+   +    ++R      CL      DT+ E  K K  E L++ ++S D+ N
Sbjct: 24  ENPTEKIANGLKSYVEKRGLPSGLCLGSCSVLDTAGEGAKSKLYEVLESSVVSGDKNN 81


>At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase family
           protein similar to Pyrrolidone-carboxylate peptidase
           (Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains
           Prosite PS00141: Eukaryotic and viral aspartyl proteases
           active site
          Length = 217

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = -3

Query: 315 EEPLEKMTESISETEDERSYTP--CLDENKSKDTSLETEKDKGLEGLDTEMISEDEGN 148
           E P EK+   +    ++R      CL      DT+ E  K K  E L++ ++S D+ N
Sbjct: 24  ENPTEKIANGLKSYVEKRGLPSGLCLGSCSVLDTAGEGAKSKLYEVLESSVVSGDKNN 81


>At5g66540.1 68418.m08389 expressed protein ; supported by
           full-Length cDNA gi:12057175 from [Arabidopsis thaliana]
          Length = 524

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = -3

Query: 282 SETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFSEEDKPKSVG 109
           SE EDE       +E + ++   E EKD   EG++ +     E  E F EE + +  G
Sbjct: 136 SEGEDEEEEEEDEEEEEEEEEEEEEEKDGDNEGIEDKFFKIKELEE-FLEEGEAEEYG 192


>At5g27160.1 68418.m03241 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 702

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -3

Query: 330 VSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISED 157
           V+P   E  ++    I E +  R      +ENK +D + E E  + L   + E ISE+
Sbjct: 7   VTPSSSESEDRRVTIIREADMNREEVAA-EENKFEDENCEQEPPENLNEPEEEKISEE 63


>At5g18475.1 68418.m02177 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535:  PPR repeat
          Length = 506

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 516 SERKQMPSPKPRASLQPTE 460
           SE+K+ PSP P +S+ P E
Sbjct: 28  SEKKKKPSPPPESSISPVE 46


>At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger)
           family protein / pentatricopeptide (PPR)
           repeat-containing protein contains Pfam domains PF01535:
           PPR repeat and PF00097: Zinc finger, C3HC4 type (RING
           finger)
          Length = 1208

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = -3

Query: 330 VSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEG 151
           V+P   E  ++    I E +  R      +ENK +D + E E  + L   + E ISE+  
Sbjct: 432 VTPSSSESEDERVTIIREADMNREEVA--EENKFEDENCEQESPENLNEPEEENISEEGD 489

Query: 150 N 148
           N
Sbjct: 490 N 490


>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
           At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
           At3g47270, At2g02200
          Length = 847

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
 Frame = -3

Query: 354 GDRERPASVSPRGEEPLEKMTESI---SETEDERSYTPCL-------DENKSKDTSLETE 205
           GD E       + EE  EK  E +    + E E+   P         +E K ++   E E
Sbjct: 472 GDEEMEGEEEKQEEEGKEKEEEKVEYRGDEETEKQEIPKQGDEEMEGEEEKQEEEGKEEE 531

Query: 204 KDK----GLEGLDTEMISEDEGNEMFSEEDKPKSVG 109
           ++K    G EG + + I +    EM  EE+K +  G
Sbjct: 532 EEKVEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEG 567



 Score = 27.9 bits (59), Expect = 9.4
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = -3

Query: 318 GEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMF 139
           GEE  EK  E   E E+E+      D + + +   ETEK +  +  D EM  E+   E  
Sbjct: 558 GEE--EKQEEEGKEEEEEKICVEYKDHHSTCNVE-ETEKQENPKQGDEEMEREEGKEEKV 614

Query: 138 SEEDK 124
            E D+
Sbjct: 615 EEHDE 619


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,227,268
Number of Sequences: 28952
Number of extensions: 222670
Number of successful extensions: 924
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2058178400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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