Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L16
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   1.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   7.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.4  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -2

Query: 404 GFDSSFTPAQLQQIRRISFAQVLCRTLDTIETIQPFVFLSPQNPDNERTS 255
           GF   F P+Q+ +   I F      TLD  E ++  VF+  + P +  TS
Sbjct: 288 GF-GDFQPSQVHKQTAICFKAPRYHTLDITEPVK--VFIQLRRPSDGATS 334


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 388 SLRRNYSRSEGYPSRK 341
           +++++YS   GYP+R+
Sbjct: 15  AIKKSYSIENGYPARR 30


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +1

Query: 343  CAKDILLICCSCAGVNDESKPPFSYQNLSPFLKL 444
            CA D+  IC  C     E +    +  L  F K+
Sbjct: 1005 CAADVFYICHVCYATIQEVRAKIYFFYLVKFYKV 1038


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +1

Query: 343 CAKDILLICCSCAGVNDESKPPFSYQNLSPFLKL 444
           CA D+  IC  C     E +    +  L  F K+
Sbjct: 286 CAADVFYICHVCYATIQEVRAKIYFFYLVKFYKV 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,560
Number of Sequences: 336
Number of extensions: 3959
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)