Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L16
         (852 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0942 + 22773678-22773777,22773869-22774022,22774194-227742...    31   0.88 
02_04_0426 - 22802143-22802667,22804929-22805129                       31   1.5  
10_06_0164 + 11364436-11367280,11367357-11367715                       29   3.6  
12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379     29   4.7  
03_06_0726 - 35761959-35762063,35762232-35762336,35762543-357626...    29   4.7  
01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962     29   4.7  
05_03_0617 - 16257281-16257943                                         28   8.2  

>07_03_0942 +
           22773678-22773777,22773869-22774022,22774194-22774265,
           22774353-22774424,22774599-22774667,22774754-22774926,
           22775457-22775629,22775654-22775827,22775987-22776113,
           22776184-22776252,22776432-22776621,22776789-22776921,
           22777091-22777441
          Length = 618

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = -2

Query: 602 LKRVMPERVVRKMEFLXQGCG*HRPITGGMAERPVVGGLVGPTFACIIAQQF 447
           L   +P  +   +EF   GC  H P         V+GG+ G + AC  A  F
Sbjct: 141 LNNQLPHGLSISVEFSYGGCAYHSPPGASNQRIAVIGGVAGGSLACTFALGF 192


>02_04_0426 - 22802143-22802667,22804929-22805129
          Length = 241

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 424 LSPFLKLPNCCAMMQANVGPTRPPTTGLSAIPPVIGLCHP 543
           ++P L  P+C A +  +  P  PP T LS  PP   L  P
Sbjct: 26  VAPLLLPPSCQARLPTS-SPVMPPVTPLSPPPPCFALSRP 64


>10_06_0164 + 11364436-11367280,11367357-11367715
          Length = 1067

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 319 VSKVRHRTCAKDILLICCSCAGVN 390
           +SK+RHR      ++ CCSC+G+N
Sbjct: 811 ISKIRHRNLIG--VITCCSCSGLN 832


>12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379
          Length = 881

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 467 CIIAQQFGNLRKGDRFWYENGGFDSSFTPAQLQQIRRI 354
           CI +QQF +L +    +YE GG    F    + ++RR+
Sbjct: 766 CISSQQFQSLMEFRFIYYEGGGLRMLFQQEAMAKLRRL 803


>03_06_0726 -
           35761959-35762063,35762232-35762336,35762543-35762665,
           35763056-35763316,35763449-35763905,35764637-35764755,
           35764851-35764919
          Length = 412

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = -2

Query: 419 WYENGGFDSSFTPAQLQQIRRISFAQVLCRTLDTIETIQPFVFLSPQNPDNE 264
           W + G  D+ +T    +  R+I   +V   + D +    P     PQNP ++
Sbjct: 95  WTDGGKVDAKYTSRAAELYRQILQKEVAKSSADNVLPSSPVAASQPQNPSDD 146


>01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962
          Length = 774

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 518 GMAERPVVGGLVGPTFACI 462
           G + +PVVG + GPT ACI
Sbjct: 733 GASRKPVVGKISGPTIACI 751


>05_03_0617 - 16257281-16257943
          Length = 220

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +1

Query: 403 PPFSYQNLSPFLKLPNCCAMMQANVGPTRPPTTGLSAIPPVIGLC 537
           PPF    LSP L  P C   +  +  P  P    +   PP +G C
Sbjct: 16  PPFF---LSPPLAAPRCSTALSPSSPPFHPTRLRIRWAPPPVGWC 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,916,901
Number of Sequences: 37544
Number of extensions: 421426
Number of successful extensions: 965
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)