Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L16
         (852 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.)             100   1e-21
SB_47801| Best HMM Match : An_peroxidase (HMM E-Value=0)               59   4e-09
SB_24473| Best HMM Match : An_peroxidase (HMM E-Value=0)               52   6e-07
SB_26887| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   1e-05
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_37179| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.4  

>SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1565

 Score =  100 bits (240), Expect = 1e-21
 Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
 Frame = -2

Query: 665  GXP-YTAWREPCGLTPIXSFDDLKRVMPERVVRK-MEFLXQGCG*HRPI-TGGMAERPVV 495
            G P Y  WR  C LT    F++ +  + + V R+ ++ +  G      +   G+AE PV 
Sbjct: 1091 GLPGYGVWRRECNLTHAEIFEETRDEIRDPVTRQILDRVYNGSVEFADLWVSGLAENPVK 1150

Query: 494  GGLVGPTFACIIAQQFGNLRKGDRFWYENGGFDSSFTPAQLQQIRRISFAQVLCRTLDTI 315
            G  VGPTF CI+  QF  LR GDRFWYEN G    F   QL++I++IS ++V+C  L  I
Sbjct: 1151 GASVGPTFLCILRSQFRRLRDGDRFWYENNGV---FGKEQLEEIKKISLSRVMCDNLPGI 1207

Query: 314  ETIQPFVFLSPQNPDNERTSCQNGLLSNFDLSPW 213
             ++Q   F +P + D  R +C    +S  DL+ W
Sbjct: 1208 VSVQRDAFRAPSSSD-LRVACAR--ISGIDLTKW 1238



 Score = 33.1 bits (72), Expect = 0.29
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -1

Query: 750  TNHLFQTPHFDFGMDLAAINIQ 685
            T HLFQ P    G DLAA+NIQ
Sbjct: 1064 TKHLFQQPESQHGFDLAALNIQ 1085


>SB_47801| Best HMM Match : An_peroxidase (HMM E-Value=0)
          Length = 1263

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 38/83 (45%), Positives = 44/83 (53%)
 Frame = -2

Query: 656  YTAWREPCGLTPIXSFDDLKRVMPERVVRKMEFLXQGCG*HRPITGGMAERPVVGGLVGP 477
            Y A RE  GL    SF ++     E  ++K E           + GG+AE  V GG VG 
Sbjct: 1098 YNAVREAIGLPRRASFAEI--TPDENTLKKFEVYPSVDDVDLWV-GGLAEEHVEGGCVGE 1154

Query: 476  TFACIIAQQFGNLRKGDRFWYEN 408
            TFA IIA QF  LR GDRFWYEN
Sbjct: 1155 TFARIIAMQFKVLRDGDRFWYEN 1177


>SB_24473| Best HMM Match : An_peroxidase (HMM E-Value=0)
          Length = 647

 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = -2

Query: 656 YTAWREPCGLTPIXSFDDLKRVMPERVVR-KMEFLXQGCG*HRPITGGMAERPVVGGLVG 480
           Y +WR+ C L+   SFDDLK  +    +R ++E L +          G+ E    GG VG
Sbjct: 569 YNSWRKLCNLSVAESFDDLKNEISSADIRARLEKLYKDPSNVDLWLAGLLEDLEPGGQVG 628

Query: 479 PTFACIIAQQFGNLRKGD 426
             F+CI+ +QF  LR GD
Sbjct: 629 KVFSCILVEQFKRLRDGD 646


>SB_26887| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 284

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = -2

Query: 656 YTAWREPCGLTPIXSFDDLKRVMPERVVR-KMEFLXQGCG*HRPITGGMAERPVVGGLVG 480
           Y +WR+ C L+   SFDDLK  +    +R ++E L +          G+ E    GG VG
Sbjct: 25  YNSWRKLCNLSVAESFDDLKNEISSADIRARLEKLYKDPSNVDLWLAGLLEDLEPGGQVG 84

Query: 479 PTFACIIAQQFGNLR 435
             F+CI+ +QF  LR
Sbjct: 85  KVFSCILVEQFKRLR 99


>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1417

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 423 ILVRKWRFRFIIHSGATTADQKDILRASSMSNFRHDRNDPTVCFPLPS 280
           I+V  W  R  + +G TT  + +  R + M+N    R+D    FPLP+
Sbjct: 782 IIVAAWYRRRRLKNGDTTGVRSEQSRVTGMTNDTIPRDDNDYAFPLPT 829


>SB_37179| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 156

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 447 ELLRDDASKRWPN*TSNDWPFSHTASNRSMSSTSLXQEFH 566
           ++LR +  KRW N   + W     + N  +S+  L  +FH
Sbjct: 26  QVLRKEFKKRWQNKQGSAWNDDSVSGNLLLSAGGLKLKFH 65


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,067,998
Number of Sequences: 59808
Number of extensions: 479628
Number of successful extensions: 1087
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)