BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_L16 (852 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g33990.1 68414.m04214 hydrolase, alpha/beta fold family prote... 29 3.0 At2g38660.1 68415.m04748 tetrahydrofolate dehydrogenase/cyclohyd... 29 3.9 At3g57640.1 68416.m06422 protein kinase family protein contains ... 28 9.1 >At1g33990.1 68414.m04214 hydrolase, alpha/beta fold family protein similar to polyneuridine aldehyde esterase GI:6651393 from [Rauvolfia serpentina], SP|Q40708 PIR7A protein {Oryza sativa}, ethylene-induced esterase [Citrus sinensis] GI:14279437; contains Pfam profile PF00561: hydrolase, alpha/beta fold family Length = 348 Score = 29.5 bits (63), Expect = 3.0 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -2 Query: 584 ERVVRKMEFLXQGCG*HRPITGGMAERPVVGGL 486 ER +++ +FL G G +P TG M E+P + GL Sbjct: 218 ERFMKESQFLIYGNGKDKPPTGFMFEKPHMKGL 250 >At2g38660.1 68415.m04748 tetrahydrofolate dehydrogenase/cyclohydrolase, putative similar to SP|P09440 C-1-tetrahydrofolate synthase, mitochondrial precursor (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3) {Saccharomyces cerevisiae}; contains Pfam profiles PF02882: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain, PF00763: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Length = 352 Score = 29.1 bits (62), Expect = 3.9 Identities = 24/94 (25%), Positives = 39/94 (41%) Frame = -2 Query: 587 PERVVRKMEFLXQGCG*HRPITGGMAERPVVGGLVGPTFACIIAQQFGNLRKGDRFWYEN 408 PE + RK + + G + G + V VG T + +FG GD + E Sbjct: 258 PEHITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSSCEFGYRLVGDVCYEEA 317 Query: 407 GGFDSSFTPAQLQQIRRISFAQVLCRTLDTIETI 306 G S+ TP + ++ +LC TL+ + I Sbjct: 318 LGVASAITPVP-GGVGPMTITMLLCNTLEAAKRI 350 >At3g57640.1 68416.m06422 protein kinase family protein contains similarity to protein kinases Length = 356 Score = 27.9 bits (59), Expect = 9.1 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = -1 Query: 423 ILVRKWRFRFIIHSGATTADQKDILRASSMSNFRH 319 +L++KWR+RF H+G +DI +S +S ++ Sbjct: 91 LLIKKWRYRFSEHNGGNFC--RDIAISSIVSGHKN 123 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,999,922 Number of Sequences: 28952 Number of extensions: 345516 Number of successful extensions: 838 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 799 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 838 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1980143200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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