Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L15
(805 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 87 2e-17
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 87 2e-17
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 85 5e-17
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 85 5e-17
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 85 5e-17
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 85 5e-17
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 64 1e-10
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 56 4e-08
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 54 1e-07
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 51 9e-07
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 45 8e-05
11_01_0455 + 3517281-3519798,3519888-3520261 31 1.4
06_03_1208 - 28422941-28423139,28423854-28424434,28424705-284250... 29 4.3
08_02_0363 + 16238710-16240224,16240537-16240545 28 10.0
08_01_0412 + 3675767-3676069,3676627-3677877 28 10.0
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 28 10.0
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = -2
Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
LL FA KQDLPNAMN AEITDKLG HSLR R+WYIQ+TCATSG+GL G
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 169
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = -2
Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
LL FA KQDLPNAMN AEITDKLG HSLR R+WYIQ+TCATSG+GL G
Sbjct: 127 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 175
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = -2
Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
LL FA KQDLPNAMN AEITDKLG HSLR R+WYIQ+TCAT+G+GL G
Sbjct: 138 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEG 186
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = -2
Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
LL FA KQDLPNAMN AEITDKLG HSLR R+WYIQ+TCAT+G+GL G
Sbjct: 244 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEG 292
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = -2
Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
LL FA KQDLPNAMN AEITDKLG HSLR R+WYIQ+TCAT+G+GL G
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEG 169
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = -2
Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
LL FA KQDLPNAMN AEITDKLG HSLR R+WYIQ+TCAT+G+GL G
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEG 169
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = -2
Query: 804 GXXLLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
G +L FA KQDL +AM+ AEITD L HS++ +W+IQA+CA +G+GL G
Sbjct: 227 GAVVLVFANKQDLKDAMSPAEITDALSLHSIKNHDWHIQASCAITGEGLYDG 278
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = -2
Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
LL FA KQD+ AM E+ + LG + L R W+IQ TCA GDGL G
Sbjct: 121 LLVFANKQDMRGAMTPMEVCEGLGLYDLNNRIWHIQGTCALKGDGLYEG 169
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = -2
Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
+L FA KQD+ AM E+ + LG + L+ R W+IQ +CA GDGL G
Sbjct: 121 ILVFANKQDMKGAMTPLEVCEGLGLYDLKNRIWHIQGSCALKGDGLYEG 169
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = -2
Query: 804 GXXLLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
G +L +A KQDLP A++ A IT+ L H ++ R W I T A G+GL G
Sbjct: 133 GAVVLVYANKQDLPGALDDAAITESLELHKIKSRQWAIFKTSAIKGEGLFEG 184
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXH-SLRXRNWYIQATCATSGDGLXRG 649
+L A KQDL AM+ +E+ +LG + L+ R W+ Q A +GDGL G
Sbjct: 120 ILLLANKQDLKGAMSSSEVCQRLGAYEELKNRRWHCQGASALTGDGLHGG 169
>11_01_0455 + 3517281-3519798,3519888-3520261
Length = 963
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 475 LVTEGAPHSFRTRCNTARCVR 413
L TEGA HSF T CN R VR
Sbjct: 682 LETEGAEHSFITECNALRKVR 702
>06_03_1208 -
28422941-28423139,28423854-28424434,28424705-28425078,
28425235-28425339,28425902-28425970,28426084-28426156,
28426395-28426478,28426616-28426648,28426731-28426790,
28427535-28427627,28427851-28427970,28428804-28428886,
28428887-28429007,28429114-28429164,28429245-28429333,
28429429-28429561,28430220-28430354,28430581-28430952,
28431679-28431796,28431883-28431998,28432131-28432442
Length = 1106
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 36 LTLNSLLRQLIPNNYCIHIKHVM*LTYHASATYLSTSQCAITQGXMLHLFLPPLSDKIKK 215
+TL + +QL +++C+ +K V + S + QG ML +L SDK+KK
Sbjct: 649 VTLQRIAKQLF-SSFCVDVKEVRGVGLKISRLEHADLARGAPQGNMLESWLASPSDKLKK 707
>08_02_0363 + 16238710-16240224,16240537-16240545
Length = 507
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 647 DPRYSPSPEVAHVAWMYQLRXRSECXPSLSVISAXFIAFG 766
D RY P AWM + R+ C SV++ IAFG
Sbjct: 453 DQRYRSRPS-QWTAWMLREHCRNPCVAVASVLAIIAIAFG 491
>08_01_0412 + 3675767-3676069,3676627-3677877
Length = 517
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 470 DRRRAAFVPNQMQYGTLCALKYCFSKYYINYVYLNAI 360
D +RA PN++ YG L Y +++ Y+ AI
Sbjct: 244 DMKRAKVEPNEITYGILAIAHAVARLYTVSHTYVEAI 280
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 631 ISSRTPTANRMCANSQTNLIIERDYGLRYVNFI 533
++++ ANR C + QTN++ ++D L FI
Sbjct: 502 LTAQLSDANRSCTSGQTNVVPQKDVNLYKDTFI 534
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,598,695
Number of Sequences: 37544
Number of extensions: 360810
Number of successful extensions: 742
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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