Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L15
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32305-19|AAK18851.1|  181|Caenorhabditis elegans Adp-ribosylati...    87   2e-17
AY519855-1|AAR89636.1|  180|Caenorhabditis elegans ADP-ribosylat...    80   2e-15
AF045644-6|AAC02598.1|  180|Caenorhabditis elegans Adp-ribosylat...    80   2e-15
AL117204-5|CAB55153.1|  175|Caenorhabditis elegans Hypothetical ...    64   8e-11
U70852-7|AAK29813.1|  179|Caenorhabditis elegans Adp-ribosylatio...    53   2e-07
Z22181-6|CAA80185.1|  178|Caenorhabditis elegans Hypothetical pr...    52   6e-07
Z46241-6|CAA86319.1|  190|Caenorhabditis elegans Hypothetical pr...    48   8e-06
Z93378-2|CAB07583.1|  184|Caenorhabditis elegans Hypothetical pr...    46   4e-05
Z50044-1|CAA90353.2|  184|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z49967-8|CAA90255.1|  180|Caenorhabditis elegans Hypothetical pr...    35   0.078
U80847-2|AAB37982.2|  475|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z81563-3|CAB04565.1|  222|Caenorhabditis elegans Hypothetical pr...    29   3.9  

>U32305-19|AAK18851.1|  181|Caenorhabditis elegans Adp-ribosylation
           factor relatedprotein 1.2 protein.
          Length = 181

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 39/49 (79%), Positives = 41/49 (83%)
 Frame = -2

Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
           LL FA KQDLP AMN AE+TDKLG HSLR R+WYIQATCATSGDGL  G
Sbjct: 121 LLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEG 169



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 653 EGLDWLSNQLKN 618
           EGLDWLSNQLKN
Sbjct: 168 EGLDWLSNQLKN 179


>AY519855-1|AAR89636.1|  180|Caenorhabditis elegans ADP-ribosylation
           factor related(20.5 kD) (arf-3) protein.
          Length = 180

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
           LL FA KQDLPNAM  AE+TDKLG H+LR R WYIQATCAT G GL  G
Sbjct: 121 LLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEG 169


>AF045644-6|AAC02598.1|  180|Caenorhabditis elegans Adp-ribosylation
           factor relatedprotein 3 protein.
          Length = 180

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
           LL FA KQDLPNAM  AE+TDKLG H+LR R WYIQATCAT G GL  G
Sbjct: 121 LLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEG 169


>AL117204-5|CAB55153.1|  175|Caenorhabditis elegans Hypothetical
           protein Y116A8C.12 protein.
          Length = 175

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 28/49 (57%), Positives = 35/49 (71%)
 Frame = -2

Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
           +L FA KQDL +AM   EI DKLG   +R RNWY+Q +CA++GDGL  G
Sbjct: 117 ILVFANKQDLADAMKPHEIQDKLGLTRIRDRNWYVQPSCASTGDGLHEG 165


>U70852-7|AAK29813.1|  179|Caenorhabditis elegans Adp-ribosylation
           factor relatedprotein 1.1 protein.
          Length = 179

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 26/49 (53%), Positives = 31/49 (63%)
 Frame = -2

Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
           LL FA KQD+PNA + AE+T  L   SL+ R W+I  T A SG GL  G
Sbjct: 121 LLVFANKQDMPNARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEG 169


>Z22181-6|CAA80185.1|  178|Caenorhabditis elegans Hypothetical
           protein ZK632.8 protein.
          Length = 178

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = -2

Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLR-XRNWYIQATCATSGDGL 658
           +L  A KQDLP AMN AE++ +LG  +LR  R W I   CA  G+GL
Sbjct: 121 ILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGL 167


>Z46241-6|CAA86319.1|  190|Caenorhabditis elegans Hypothetical
           protein C38D4.8 protein.
          Length = 190

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -2

Query: 804 GXXLLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXR 652
           G  ++  A K D+P AM  ++IT  LG +  R   W I +TCA +GDGL +
Sbjct: 122 GIPIVILANKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDK 172


>Z93378-2|CAB07583.1|  184|Caenorhabditis elegans Hypothetical
           protein F19H8.3 protein.
          Length = 184

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 23/49 (46%), Positives = 28/49 (57%)
 Frame = -2

Query: 795 LLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGLXRG 649
           +L FA KQDL  A +  EIT KL    LR R W+IQA  A   +G+  G
Sbjct: 122 VLIFANKQDLVTAASSEEITRKLNLDLLRDRTWHIQACSALKNEGINDG 170


>Z50044-1|CAA90353.2|  184|Caenorhabditis elegans Hypothetical
           protein F22B5.1 protein.
          Length = 184

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 21/49 (42%), Positives = 27/49 (55%)
 Frame = -2

Query: 804 GXXLLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGL 658
           G  LL  A K DLP A++   I   L  HS++  +W I + CA SGD L
Sbjct: 117 GASLLVLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKIFSCCALSGDRL 165


>Z49967-8|CAA90255.1|  180|Caenorhabditis elegans Hypothetical
           protein F54C9.10 protein.
          Length = 180

 Score = 34.7 bits (76), Expect = 0.078
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 804 GXXLLXFAXKQDLPNAMNXAEITDKLGXHSLRXRNWYIQATCATSGDGL 658
           G  L   A KQD+   +   E+   LG  +LR R   I  T A+ G+GL
Sbjct: 117 GAVLAVLANKQDIAGCLTETEVYKALGLDALRNRTIQIFKTSASKGEGL 165


>U80847-2|AAB37982.2|  475|Caenorhabditis elegans Hypothetical
           protein C17H11.1 protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 437 MQYGTLCALKYCFSKYYINYVYLNAINGMQINSVQCLYLVAL 312
           + Y  +   K  F  YY  Y+    ING  I+ + C +L+ L
Sbjct: 104 IHYCLVSTTKMAFVMYYTTYIEAPFINGFLISGLYCSFLLTL 145


>Z81563-3|CAB04565.1|  222|Caenorhabditis elegans Hypothetical
           protein K04H8.3 protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = -1

Query: 574 IIERDYGLRYVNFIC---Y*IQCIMCGIINVLLT-RHLVTEGAPHSFRT 440
           I E+   LRY NFIC   + + C +   + + +T R++   G P +F T
Sbjct: 105 ITEQQLNLRYYNFICSSHFHLDCKLTETLQICMTDRYVAVLGLPLAFDT 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,324,660
Number of Sequences: 27780
Number of extensions: 331971
Number of successful extensions: 753
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)