Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L11
         (836 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379     48   9e-06
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611...    48   9e-06
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998     48   9e-06
03_01_0034 + 318432-318825,318902-319851                               48   9e-06
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467           48   9e-06
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635...    48   9e-06
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349     48   9e-06
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505...    46   5e-05
03_02_0943 + 12598616-12598789,12599790-12601250                       29   6.1  
02_05_1127 + 34292894-34293284,34293948-34295443                       29   6.1  

>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
          Length = 446

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = -3

Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
           F   YTGEGMDEMEFTEAESNM DLV
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLV 419


>05_04_0306 +
           20058640-20059159,20060406-20060819,20060921-20061190,
           20062179-20062849
          Length = 624

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = -3

Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
           F   YTGEGMDEMEFTEAESNM DLV
Sbjct: 574 FLHWYTGEGMDEMEFTEAESNMNDLV 599


>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
          Length = 444

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = -3

Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
           F   YTGEGMDEMEFTEAESNM DLV
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLV 419


>03_01_0034 + 318432-318825,318902-319851
          Length = 447

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = -3

Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
           F   YTGEGMDEMEFTEAESNM DLV
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLV 419


>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
          Length = 447

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = -3

Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
           F   YTGEGMDEMEFTEAESNM DLV
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLV 419


>01_06_1060 +
           34162161-34162554,34162613-34162675,34163262-34163531,
           34163944-34164623
          Length = 468

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = -3

Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
           F   YTGEGMDEMEFTEAESNM DLV
Sbjct: 415 FLHWYTGEGMDEMEFTEAESNMNDLV 440


>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
          Length = 447

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = -3

Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
           F   YTGEGMDEMEFTEAESNM DLV
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLV 419


>03_05_0575 +
           25747813-25748206,25748567-25748614,25750296-25750565,
           25750658-25751334
          Length = 462

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = -3

Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
           F   YT EGMDEMEFTEAESNM DLV
Sbjct: 410 FLHWYTSEGMDEMEFTEAESNMNDLV 435


>03_02_0943 + 12598616-12598789,12599790-12601250
          Length = 544

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -2

Query: 334 ICSIHSLIFHQASLRARSEICKG*SKIDTFYLHMCSRNKMADQNS 200
           +  I +L+  ++S    S +C G +     Y  +CS+ + AD+NS
Sbjct: 309 LAEIKALLSSESSSECGSSVCDGVTLSAEEYFTLCSKAQEADENS 353


>02_05_1127 + 34292894-34293284,34293948-34295443
          Length = 628

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 545 RQTLRPRRRWPPGTVG 592
           R T +P+RRWPPG+ G
Sbjct: 83  RATGQPKRRWPPGSSG 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,392,811
Number of Sequences: 37544
Number of extensions: 317364
Number of successful extensions: 726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)