Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L11
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 48 8e-06
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 48 8e-06
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 48 8e-06
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 48 1e-05
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine re... 33 0.33
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 29 3.1
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 29 3.1
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 29 3.1
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 29 3.1
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 29 4.1
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 29 4.1
Z93397-3|CAB07720.2| 376|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 28 9.5
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 28 9.5
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 28 9.5
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 28 9.5
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 28 9.5
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 28 9.5
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
F YTGEGMDEMEFTEAESNM DLV
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLV 419
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
F YTGEGMDEMEFTEAESNM DLV
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLV 419
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
F YTGEGMDEMEFTEAESNM DLV
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLV 419
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
F YTGEGMDEMEFTEAESNM DLV
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLV 419
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
F YTGEGMDEMEFTEAESNM DL+
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLI 419
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDLV 601
F YTGEGMDEMEFTEAESNM DL+
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLI 419
>AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine
receptor, class h protein37 protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 220 CFCCTYVNKKCLF*ISLYKFQI*LSTRPGGISRNVLNRLCSFK*FVITGSLVVLS---VK 390
CF C ++ +F I +Y FQ + + G+ +N + L +K +VI + S +
Sbjct: 59 CFTCEWLGN--VFLIDVYDFQPSILVKINGVLKNYIRPLNLYKVYVIVEGITETSGLILF 116
Query: 391 S*KACLILTLYRNHYGYSNKM 453
+ + LI+ LYR H K+
Sbjct: 117 TSRVLLIVDLYRPHPSIQRKI 137
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EFTEA ++ L
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAAL 426
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EFTEA ++ L
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAAL 426
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EFTEA ++ L
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAAL 426
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EFTEA ++ L
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAAL 426
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EFTEA ++ L
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAAL 426
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EFTEA ++ L
Sbjct: 402 FVHWYVGEGMEEGEFTEAREDLAAL 426
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EFTEA ++ L
Sbjct: 39 FVHWYVGEGMEEGEFTEAREDLAAL 63
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EF+EA +M L
Sbjct: 410 FVHWYVGEGMEEGEFSEAREDMAAL 434
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EF+EA +M L
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDMAAL 428
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EF+EA +M L
Sbjct: 382 FVHWYVGEGMEEGEFSEAREDMAAL 406
>Z93397-3|CAB07720.2| 376|Caenorhabditis elegans Hypothetical
protein ZC482.6 protein.
Length = 376
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -2
Query: 241 LHMCSRNKMADQNSIPTNADSTQTPVPFCFCCTECIKFGCCHERQTFNCDGFSNRSF 71
LHM +R + + TN T + FCC+E + +G F G+++R F
Sbjct: 253 LHMTARIRKNISSDKSTNTSKLLTLMACSFCCSETL-YGSFFFADRFMLYGYNDRRF 308
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EF+EA ++ L
Sbjct: 399 FVHWYVGEGMEEGEFSEAREDLAAL 423
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EF+EA ++ L
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAAL 428
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EF+EA ++ L
Sbjct: 409 FVHWYVGEGMEEGEFSEAREDLAAL 433
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EF+EA ++ L
Sbjct: 403 FVHWYVGEGMEEGEFSEAREDLAAL 427
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EF+EA ++ L
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAAL 428
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 678 FXALYTGEGMDEMEFTEAESNMXDL 604
F Y GEGM+E EF+EA ++ L
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAAL 428
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,049,241
Number of Sequences: 27780
Number of extensions: 292113
Number of successful extensions: 722
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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