Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L11
         (836 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.5  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          24   1.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.1  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 575 PPGTVGTRKTRSXMLLSASVNSISSMPSPVYNA 673
           PPGT      R  ++L  ++  +S + S +YNA
Sbjct: 650 PPGTRFFYPDRKQVILKCNIQDMSFLFSQLYNA 682


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +2

Query: 542 LRQTLRPRRRWPPGTVGTRKTRSXMLLSASV-NSISSMPSPVYNAXKXAPEHSGDCP 709
           +RQ ++ +R      V  R       L   V N+ISS+P P  +        SGD P
Sbjct: 19  MRQNMKLKRHLAQDKVKVRVAEEVDPLPFGVENTISSVPQPPRSLEGSYDSSSGDSP 75


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 575 PPGTVGTRKTRSXMLLSASVNSISSMPSPVYNA 673
           PPGT      R  ++L  ++  +S + S +YNA
Sbjct: 740 PPGTRFFYPDRKQVILKCNIQDMSFLFSQLYNA 772


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 628 LGELHLVHALAGVQC 672
           LG+ +L++A+AG QC
Sbjct: 661 LGKAYLMYAIAGSQC 675


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +3

Query: 90  PSQLNVWRSWQHPNFIHSVQQ 152
           P+    WR W+ PN +  + +
Sbjct: 856 PAVYEDWRHWKFPNLVEVLDE 876


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,361
Number of Sequences: 438
Number of extensions: 3644
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)