Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L10
         (845 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66513-5|CAA91334.1|  331|Caenorhabditis elegans Hypothetical pr...    54   1e-07
Z92834-5|CAB07390.1|  402|Caenorhabditis elegans Hypothetical pr...    42   4e-04
AF016428-7|AAB65361.1|  439|Caenorhabditis elegans Dnaj domain (...    35   0.084
Z47356-1|CAA87414.2|   82|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>Z66513-5|CAA91334.1|  331|Caenorhabditis elegans Hypothetical
           protein F54D5.8 protein.
          Length = 331

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 20/46 (43%), Positives = 32/46 (69%)
 Frame = -3

Query: 573 KPHTVKRFPGYGLPFPKEPTRKGDLLVAFDIKFPERLTTGVKEILM 436
           KP T +R  G GLP PK P+ +GDL++ FD++FP +L    +E+++
Sbjct: 283 KPGTTRRLTGKGLPNPKSPSHRGDLIIEFDVEFPSQLNPTQREVIL 328


>Z92834-5|CAB07390.1|  402|Caenorhabditis elegans Hypothetical
           protein F39B2.10 protein.
          Length = 402

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = -3

Query: 561 VKRFPGYGLPFPKEPTRKGDLLVAFDIKFPERLTTGVKEILMDTLP 424
           VK     G+P  +  + KGDLLV FD+KFP+++     + L D LP
Sbjct: 302 VKVIHNEGMPMRRASSDKGDLLVQFDVKFPDKINPDAAKKLADLLP 347


>AF016428-7|AAB65361.1|  439|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 19 protein.
          Length = 439

 Score = 34.7 bits (76), Expect = 0.084
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -3

Query: 573 KPHTVKRFPGYGLPFPKEPTRKGDLLVAFDIKFPE 469
           KP  ++   G G+P  K P  KG+L V F+++FP+
Sbjct: 332 KPGVIRGVLGKGMPNKKYPELKGNLFVEFEVEFPK 366


>Z47356-1|CAA87414.2|   82|Caenorhabditis elegans Hypothetical
           protein T15H9.1 protein.
          Length = 82

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -3

Query: 540 GLPFPKEPTRKGDLLVAFDIKFPE 469
           G+P  ++  +KG L+V FD++FP+
Sbjct: 31  GMPSLEDNNKKGMLVVTFDVEFPK 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,662,962
Number of Sequences: 27780
Number of extensions: 330761
Number of successful extensions: 625
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)