Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L10
         (845 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    26   0.38 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   3.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.5  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    22   6.2  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   6.2  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   6.2  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   8.2  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 541 IAWEPFDCVRFTISPCKLTVNFLQT*LVLQWL 636
           I W PF CV    S CK  ++  +   VL WL
Sbjct: 283 ICWVPFFCVNIVTSYCKTCISG-RAFQVLTWL 313


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = -1

Query: 557 KGSQAMDYRSPRNPQERVTCL*HLTSSFLNA*PQESKKY*WTLYLIKIFWIS 402
           + ++  D  S RNP+  V     +TSS  +    E   Y ++++ ++  W S
Sbjct: 313 ENTEGADDASERNPRSAVLAAREITSSSCSYMAHEKLSYAFSVWRMEDDWNS 364


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -3

Query: 360 TARGIDKLICQNRADQAFSM 301
           TAR ++KL+C   A++ +++
Sbjct: 101 TARSLEKLLCNVEAEENYNL 120


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 508 LSCGFLGER*SIAWEPFDCVRFTISPCKLTVNF 606
           ++  F  +  S  W  F+C+  TI    + VNF
Sbjct: 108 VAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNF 140


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 508 LSCGFLGER*SIAWEPFDCVRFTISPCKLTVNF 606
           ++  F  +  S  W  F+C+  TI    + VNF
Sbjct: 108 VAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNF 140


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 508 LSCGFLGER*SIAWEPFDCVRFTISPCKLTVNF 606
           ++  F  +  S  W  F+C+  TI    + VNF
Sbjct: 108 VAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNF 140


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 332 VKTVLIRPSVCVCL 291
           +KT+LI  ++C+C+
Sbjct: 1   MKTILIISAICICV 14


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,968
Number of Sequences: 438
Number of extensions: 4048
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)