Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L07
         (782 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1477 + 37645143-37647425                                         29   4.2  
10_08_0405 - 17657678-17658110,17658219-17659663,17659708-17660076     28   9.6  

>01_06_1477 + 37645143-37647425
          Length = 760

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
 Frame = -1

Query: 746 GRRESADAEQKEPAQDGX-TRTSRNGRASP*LYTNNYSIV*EPARSADPRARTALSLFVF 570
           GRR    A       DG  T TS     SP    + +      AR   PRAR A+   +F
Sbjct: 197 GRRNITIAVNSPRDTDGHGTHTSSTAAGSPVPGASYFGYAPGVARGMAPRARVAVYKVLF 256

Query: 569 DYGKY 555
           D G Y
Sbjct: 257 DEGGY 261


>10_08_0405 - 17657678-17658110,17658219-17659663,17659708-17660076
          Length = 748

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = -2

Query: 400 LL*LLTSIVIEIFVYFNLFFLISQSISKMKCSAPPPGRSVVVTLC*VKVMHLRKYLLSAQ 221
           +L +LT I+IE   +   F     +I +M CS   P R  +  +  V V+++R  LLS+ 
Sbjct: 444 MLLVLTVILIEAHDFLTSFVFSDWNIVRMLCSYDRPSRRWLQKIYSV-VIYIRSCLLSSS 502

Query: 220 R 218
           +
Sbjct: 503 K 503


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,916,324
Number of Sequences: 37544
Number of extensions: 337324
Number of successful extensions: 745
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)