BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_L04 (859 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 240 7e-64 At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 240 7e-64 At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 240 7e-64 At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 240 7e-64 At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 240 7e-64 At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 237 7e-63 At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 139 2e-33 At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 81 1e-15 At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 79 5e-15 At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 78 7e-15 At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 78 7e-15 At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 78 7e-15 At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 78 7e-15 At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 76 3e-14 At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 76 3e-14 At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 76 3e-14 At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 47 1e-05 At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 44 1e-04 At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.32 At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.7 At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 5.2 At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.9 At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.9 At5g45840.1 68418.m05639 leucine-rich repeat transmembrane prote... 28 9.1 At3g26855.1 68416.m03360 hypothetical protein 28 9.1 >At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 240 bits (588), Expect = 7e-64 Identities = 108/124 (87%), Positives = 116/124 (93%), Gaps = 2/124 (1%) Frame = -3 Query: 512 CCT--RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRA 339 CC RGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRA Sbjct: 315 CCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRA 374 Query: 338 VCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 VCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE Sbjct: 375 VCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434 Query: 158 VGMD 147 VG + Sbjct: 435 VGAE 438 Score = 102 bits (244), Expect = 4e-22 Identities = 44/56 (78%), Positives = 48/56 (85%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 RIHF L +YAPV SA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++Y Sbjct: 264 RIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMY 319 >At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 240 bits (588), Expect = 7e-64 Identities = 108/124 (87%), Positives = 116/124 (93%), Gaps = 2/124 (1%) Frame = -3 Query: 512 CCT--RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRA 339 CC RGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRA Sbjct: 315 CCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRA 374 Query: 338 VCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 VCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE Sbjct: 375 VCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434 Query: 158 VGMD 147 VG + Sbjct: 435 VGAE 438 Score = 102 bits (244), Expect = 4e-22 Identities = 44/56 (78%), Positives = 48/56 (85%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 RIHF L +YAPV SA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++Y Sbjct: 264 RIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMY 319 >At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 450 Score = 240 bits (588), Expect = 7e-64 Identities = 119/191 (62%), Positives = 140/191 (73%), Gaps = 2/191 (1%) Frame = -3 Query: 713 LDLPEFQXNWXLTPVSTSHWSRTRQSX-LPRRPTMNSFPSPRSQTHASSPPTRW*NATPV 537 +D+ EFQ N L P H+ + + + + S T+++ P Sbjct: 250 VDVTEFQTN--LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307 Query: 536 MASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD 360 ++A C RGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGD Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGD 367 Query: 359 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180 LAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA Sbjct: 368 LAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427 Query: 179 LEKDYEEVGMD 147 LEKDYEEVG + Sbjct: 428 LEKDYEEVGAE 438 >At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) identical to tubulin alpha-2/alpha-4 chain SP|P29510 GB:P29510 from [Arabidopsis thaliana] Length = 450 Score = 240 bits (588), Expect = 7e-64 Identities = 119/191 (62%), Positives = 140/191 (73%), Gaps = 2/191 (1%) Frame = -3 Query: 713 LDLPEFQXNWXLTPVSTSHWSRTRQSX-LPRRPTMNSFPSPRSQTHASSPPTRW*NATPV 537 +D+ EFQ N L P H+ + + + + S T+++ P Sbjct: 250 VDVTEFQTN--LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307 Query: 536 MASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD 360 ++A C RGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGD Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGD 367 Query: 359 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180 LAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA Sbjct: 368 LAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427 Query: 179 LEKDYEEVGMD 147 LEKDYEEVG + Sbjct: 428 LEKDYEEVGAE 438 >At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) nearly identical to SP:P29510 Tubulin alpha-2/alpha-4 chain from [Arabidopsis thaliana] Length = 450 Score = 240 bits (588), Expect = 7e-64 Identities = 119/191 (62%), Positives = 140/191 (73%), Gaps = 2/191 (1%) Frame = -3 Query: 713 LDLPEFQXNWXLTPVSTSHWSRTRQSX-LPRRPTMNSFPSPRSQTHASSPPTRW*NATPV 537 +D+ EFQ N L P H+ + + + + S T+++ P Sbjct: 250 VDVTEFQTN--LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307 Query: 536 MASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD 360 ++A C RGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGD Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGD 367 Query: 359 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180 LAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA Sbjct: 368 LAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427 Query: 179 LEKDYEEVGMD 147 LEKDYEEVG + Sbjct: 428 LEKDYEEVGAE 438 >At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} Length = 450 Score = 237 bits (580), Expect = 7e-63 Identities = 118/190 (62%), Positives = 135/190 (71%), Gaps = 3/190 (1%) Frame = -3 Query: 713 LDLPEFQXNWXLTPVSTSHWSRTRQSXL--PRRPTMNSFPSPRSQTHASSPPTRW*NATP 540 +D+ EFQ N L P H+ + + + + F P T P P Sbjct: 250 VDITEFQTN--LVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDP 307 Query: 539 VMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 363 ++A C RGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGG Sbjct: 308 -RHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGG 366 Query: 362 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 183 DLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLA Sbjct: 367 DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLA 426 Query: 182 ALEKDYEEVG 153 ALEKDYEEVG Sbjct: 427 ALEKDYEEVG 436 >At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 427 Score = 139 bits (336), Expect = 2e-33 Identities = 73/139 (52%), Positives = 90/139 (64%), Gaps = 2/139 (1%) Frame = -3 Query: 713 LDLPEFQXNWXLTPVSTSHWSRTRQSX-LPRRPTMNSFPSPRSQTHASSPPTRW*NATPV 537 +D+ EFQ N L P H+ + + + + S T+++ P Sbjct: 250 VDVTEFQTN--LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307 Query: 536 MASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD 360 ++A C RGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGD Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGD 367 Query: 359 LAKVQRAVCMLSNTTAIAE 303 LAKVQRAVCM+SN+T++AE Sbjct: 368 LAKVQRAVCMISNSTSVAE 386 >At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} Length = 447 Score = 80.6 bits (190), Expect = 1e-15 Identities = 38/115 (33%), Positives = 65/115 (56%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 RG + K+V+ I ++ K + FV+W P K + PPT ++ A + Sbjct: 319 RGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GIKMASTFVG 370 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 371 NSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425 Score = 47.2 bits (107), Expect = 1e-05 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 R+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++ Sbjct: 263 RLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMF 318 >At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis thaliana} Length = 449 Score = 78.6 bits (185), Expect = 5e-15 Identities = 38/115 (33%), Positives = 64/115 (55%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 RG + K+V+ I I+ K + FV+W P K + PP ++ A + Sbjct: 319 RGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMAATFVG 370 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 371 NSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 425 Score = 47.2 bits (107), Expect = 1e-05 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 R+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++ Sbjct: 263 RLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIF 318 >At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 78.2 bits (184), Expect = 7e-15 Identities = 37/115 (32%), Positives = 65/115 (56%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 RG + K+V+ + ++ K + FV+W P K + PPT ++ A + Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIG 369 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 370 NSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 Score = 48.4 bits (110), Expect = 6e-06 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 R+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++ Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMF 317 >At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 78.2 bits (184), Expect = 7e-15 Identities = 37/115 (32%), Positives = 65/115 (56%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 RG + K+V+ + ++ K + FV+W P K + PPT ++ A + Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIG 369 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 370 NSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 Score = 48.4 bits (110), Expect = 6e-06 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 R+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++ Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMF 317 >At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis thaliana}; supporting cDNA gi|15451225|gb|AY054693.1| Length = 449 Score = 78.2 bits (184), Expect = 7e-15 Identities = 37/115 (32%), Positives = 65/115 (56%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 RG + K+V+ + ++ K + FV+W P K + PPT ++ A + Sbjct: 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIG 369 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 370 NSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 Score = 48.0 bits (109), Expect = 8e-06 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 R+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++ Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMF 317 >At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis thaliana} Length = 449 Score = 78.2 bits (184), Expect = 7e-15 Identities = 37/115 (32%), Positives = 65/115 (56%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 RG + K+V+ + ++ K + FV+W P K + PPT ++ A + Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIG 369 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 370 NSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 Score = 48.4 bits (110), Expect = 6e-06 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 R+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++ Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMF 317 >At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis thaliana} Length = 444 Score = 76.2 bits (179), Expect = 3e-14 Identities = 37/115 (32%), Positives = 65/115 (56%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 RG + K+V+ + I+ K + FV+W P K + + P G ++ A + Sbjct: 318 RGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVC----DIAPKG----LKMASTFIG 369 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 370 NSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424 Score = 48.8 bits (111), Expect = 5e-06 Identities = 20/56 (35%), Positives = 32/56 (57%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 R+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ ++ Sbjct: 262 RLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVF 317 >At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis thaliana} Length = 449 Score = 75.8 bits (178), Expect = 3e-14 Identities = 36/115 (31%), Positives = 64/115 (55%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 RG + K+V+ + ++ K + FV+W P K + + P G + A + Sbjct: 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC----DIAPRG----LSMASTFIG 369 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 370 NSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 Score = 48.0 bits (109), Expect = 8e-06 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 R+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++ Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMF 317 >At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis thaliana} Length = 444 Score = 75.8 bits (178), Expect = 3e-14 Identities = 36/115 (31%), Positives = 65/115 (56%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 RG + K+V+ + ++ K + FV+W P K + + P G ++ A + Sbjct: 318 RGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVC----DIAPTG----LKMASTFIG 369 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 159 N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 370 NSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424 Score = 48.8 bits (111), Expect = 5e-06 Identities = 20/56 (35%), Positives = 32/56 (57%) Frame = -2 Query: 672 RIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 505 R+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ ++ Sbjct: 262 RLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVF 317 >At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin (TUBG2) identical to SP|P38558 Tubulin gamma-2 chain (Gamma-2 tubulin) {Arabidopsis thaliana} Length = 474 Score = 47.2 bits (107), Expect = 1e-05 Identities = 29/118 (24%), Positives = 63/118 (53%), Gaps = 4/118 (3%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V ++ + ML+ Sbjct: 327 QGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL-----MLA 381 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 162 + T+I ++R ++D + K+AF+ Y M + EF E+R+ + +L +Y+ Sbjct: 382 SHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439 >At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} Length = 474 Score = 44.4 bits (100), Expect = 1e-04 Identities = 27/118 (22%), Positives = 63/118 (53%), Gaps = 4/118 (3%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 324 +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V ++ + ML+ Sbjct: 327 QGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL-----MLA 381 Query: 323 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 162 + T+I +++ ++D + K+AF+ Y M + EF E+R+ + +L +Y+ Sbjct: 382 SHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439 >At5g33320.1 68418.m03955 triose phosphate/phosphate translocator, putative similar to SWISS-PROT:P52178 triose phosphate/phosphate translocator [Cauliflower] {Brassica oleracea} Length = 408 Score = 32.7 bits (71), Expect = 0.32 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -1 Query: 292 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 185 A ++S + +P+V+S S R WR SS P+R W Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66 >At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; Length = 698 Score = 30.3 bits (65), Expect = 1.7 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +3 Query: 387 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 491 LV DT+L TPVD ++ L G VH+ GY Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394 >At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1) (NR2) {Arabidopsis thaliana} Length = 917 Score = 28.7 bits (61), Expect = 5.2 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +2 Query: 164 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 280 R +R +PG +G+ R+ PP P R S + H +T +T Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46 >At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) Length = 587 Score = 28.3 bits (60), Expect = 6.9 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = -3 Query: 503 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 360 +G V D A T TK+ + DW P+ FK PP ++P D Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355 >At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase (MAPKK), putative (MKK4) identical to MAP kinase kinase 4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830 gi_13265419 Length = 366 Score = 28.3 bits (60), Expect = 6.9 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = +2 Query: 77 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 238 A+A + H++S P +RS +LL++P R P P L + LPPP P Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360 Query: 239 TSA 247 +S+ Sbjct: 361 SSS 363 >At5g45840.1 68418.m05639 leucine-rich repeat transmembrane protein kinase, putative and genscan+ Length = 668 Score = 27.9 bits (59), Expect = 9.1 Identities = 24/103 (23%), Positives = 40/103 (38%) Frame = -3 Query: 629 PRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKT 450 P P + P P + T AS PP ++ + WL V V + A+ Sbjct: 276 PLIPPSSPPPLPTNNTIASDPPRKFEEKSKGFKDVWLYVVIGVAAFVAMLIIVAVIFFFR 335 Query: 449 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 321 KR ++ + TG + T VP + ++++ A SN Sbjct: 336 KRAVKSIGPWKTGLSGQLQKAFVTGVPKLNRSELETACEDFSN 378 >At3g26855.1 68416.m03360 hypothetical protein Length = 163 Score = 27.9 bits (59), Expect = 9.1 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 271 SCTPSVLSCTGTSVRVWRRESSPK 200 SC P +LS + VR W +SSPK Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,337,484 Number of Sequences: 28952 Number of extensions: 358441 Number of successful extensions: 1313 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1299 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1999652000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -