Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L03
(816 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 157 2e-39
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 155 7e-39
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 123 3e-29
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 85 9e-18
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 83 5e-17
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.064
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.085
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 31 0.15
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.15
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.20
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.45
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.79
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 28 1.8
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.8
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 25 2.1
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 2.4
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.4
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 27 3.2
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 3.2
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.2
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 4.2
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.2
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 4.2
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 26 5.6
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.6
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 26 5.6
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.6
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 26 5.6
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 26 5.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 5.6
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 5.6
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 26 5.6
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 5.6
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 5.6
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 26 7.4
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 7.4
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.4
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 7.4
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 26 7.4
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 9.7
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.7
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 9.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 157 bits (381), Expect = 2e-39
Identities = 82/152 (53%), Positives = 105/152 (69%)
Frame = -1
Query: 762 PGVXHSKYFEGEACYDPKDNXLAR*IRADRDPTRRRVACLKXEVTFDIDANGILNVSAIE 583
PGV + FEGE N L + + P R V + EVTFD+DANGILNVSA+E
Sbjct: 434 PGVL-IQVFEGERARTKDCNLLGKFELSGIPPAPRGVP--QIEVTFDVDANGILNVSALE 490
Query: 582 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 403
K T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++
Sbjct: 491 KGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNS 550
Query: 402 MEDEKLKEKISDSDKQTILDKCNDTIKWLDSN 307
++D LK+K+ SDK+T+ +TI+WLDSN
Sbjct: 551 LDDPNLKDKVDASDKETVDKAVKETIEWLDSN 582
Score = 33.1 bits (72), Expect = 0.048
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -2
Query: 293 KEEYEHKQKELEGIYNPIITKM 228
K+E+E KQKELE + NPI+ K+
Sbjct: 587 KDEFEAKQKELESVANPIMAKI 608
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 155 bits (376), Expect = 7e-39
Identities = 81/152 (53%), Positives = 104/152 (68%)
Frame = -1
Query: 762 PGVXHSKYFEGEACYDPKDNXLAR*IRADRDPTRRRVACLKXEVTFDIDANGILNVSAIE 583
PGV + FEGE N L + + P R V + EVTFD+DANGILNVSA+E
Sbjct: 434 PGVL-IQVFEGERARTKDCNLLGKFELSGIPPAPRGVP--QIEVTFDVDANGILNVSALE 490
Query: 582 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 403
K T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++
Sbjct: 491 KGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNS 550
Query: 402 MEDEKLKEKISDSDKQTILDKCNDTIKWLDSN 307
++D LK+K+ SDK+ I +TI+WLD N
Sbjct: 551 LDDPNLKDKVDASDKEAIDKAVKETIEWLDHN 582
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = -2
Query: 293 KEEYEHKQKELEGIYNPIITKM 228
K+EYE KQKELEG+ NPI+ K+
Sbjct: 587 KDEYEDKQKELEGVANPIMAKI 608
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 123 bits (296), Expect = 3e-29
Identities = 65/144 (45%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
Frame = -1
Query: 738 FEGEACYDPKDNXLAR*IRADRDPTRRRVACLKXEVTFDIDANGILNVSAIEKS-TNKEN 562
+EGE +N L + P R V + EVTF++DANG+L VSA++KS K
Sbjct: 470 YEGERTLTKDNNLLGKFDLRGIPPAPRGVP--QIEVTFEVDANGVLTVSAVDKSGKGKPE 527
Query: 561 KITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKL 385
K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L
Sbjct: 528 KLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQL 587
Query: 384 KEKISDSDKQTILDKCNDTIKWLD 313
K+ DKQ +LD D +WL+
Sbjct: 588 GGKVDPEDKQAVLDAVEDVAEWLE 611
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 85.4 bits (202), Expect = 9e-18
Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Frame = -1
Query: 636 EVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 457
E TF++DANGIL V+A+EK+T + I ITN G LS +I+ M+ A+K++ +D +
Sbjct: 478 EATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAK 537
Query: 456 TIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI---LDKCNDTIKWLDSN 307
++AK+ LESY ++++T+ + + K+ DK I L +C ++ D+N
Sbjct: 538 KLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKIEAQLAECMSQLELEDTN 590
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 83.0 bits (196), Expect = 5e-17
Identities = 43/102 (42%), Positives = 64/102 (62%)
Frame = -1
Query: 636 EVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 457
EV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE MV +AEKYR D +KE
Sbjct: 516 EVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKE 574
Query: 456 TIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCND 331
I+ N ES C ++S ++ K+K+ + + K D
Sbjct: 575 AIENGNRAESVCTDIESNLDIH--KDKLDQQAVEDLRSKITD 614
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.7 bits (71), Expect = 0.064
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 582 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 406
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 405 TMED 394
++D
Sbjct: 593 KLDD 596
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.085
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -1
Query: 522 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 343
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 342 K 340
K
Sbjct: 79 K 79
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 31.5 bits (68), Expect = 0.15
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 618 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQA 445
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 444 KNA 436
+A
Sbjct: 118 LDA 120
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.15
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -1
Query: 540 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 361
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 360 KQTILDKCNDTIK 322
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.20
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = -1
Query: 573 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 394
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 393 EKLKEKISD 367
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.45
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -1
Query: 528 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 361
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 540 KGRLSKEEIERMVNEAEKYRNEDD 469
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 1.8
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = -1
Query: 594 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 415
S+I+K K T+ + + E+ + E EK + +A+ A
Sbjct: 206 SSIQKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQ 265
Query: 414 MKSTMEDEKLKEKISDSDKQ--TILDK 340
+ +E EK KEK D D++ T+ DK
Sbjct: 266 NSAKLEKEKAKEKQKDKDQEQDTVSDK 292
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 603 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 472
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 24.6 bits (51), Expect(2) = 2.1
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 474 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLD 313
D ++E I A AL + E+ I +K T+ D+ NDT +WLD
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD 234
Score = 21.4 bits (43), Expect(2) = 2.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 249 QSDNYEDVXRVPEESPEVCRASRA 178
Q+D E + ++ ++ P RASRA
Sbjct: 226 QNDTKEWLDKLGDKGPAAARASRA 249
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.5 bits (58), Expect = 2.4
Identities = 22/111 (19%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = -1
Query: 522 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 346
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 345 DKCNDTIKWLDSNXXXXXXXXXXXAERIGRH--LQSDNYEDVXRVPEESPE 199
+ + + + D + + +Q+ N +D VP SP+
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRKLWPQSTLIQAPNSDDEENVPSPSPK 600
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -3
Query: 610 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 506
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 3.2
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -1
Query: 612 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNA 436
+GIL+ + IEK +K K+ + N+ SK+ + + + +E DK KN
Sbjct: 154 DGILSFTVIEKVDDKNLKVRVNNNGKISSKKGVNLPKTDVDLPALSEKDKADLRFGVKNG 213
Query: 435 LESYCFSMKSTMEDE-KLKEKISDSDK 358
++ S ED ++E + + K
Sbjct: 214 VDMIFASFIRRAEDVIHIREVLGEEGK 240
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 3.2
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -1
Query: 558 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 379
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 378 KISDSDKQTILDKCNDTIK 322
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 507 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 403
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -1
Query: 597 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 436
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -1
Query: 477 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 316
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -1
Query: 567 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 397
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 26.2 bits (55), Expect = 5.6
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -1
Query: 612 NGILNVSAIEK-STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 436
NG + S K ST+ + + DK + E+I + ++Y NED+ + +++ A
Sbjct: 375 NGTESQSKTTKHSTSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPA 434
Query: 435 LESYCFSMKSTMEDEKLKEKISDSD 361
S+ ++ +T++ + KI +S+
Sbjct: 435 AVSFS-TITNTIQAKYSNRKIKNSN 458
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 5.6
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -1
Query: 525 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 373
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 372 SDSDKQTILDKCND 331
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 5.6
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -1
Query: 585 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 406
EK +KE K ++ + E V ++ NE+D+Q E IQ Y +++S
Sbjct: 36 EKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQ-EAIQ-------YYINVES 87
Query: 405 TMEDEKLKEKISDSDK 358
DE L ++ DS +
Sbjct: 88 QDADETLHQEAQDSSE 103
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 522 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 352
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 26.2 bits (55), Expect = 5.6
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Frame = -1
Query: 684 RADRDPTRRRVACLKXEVTFDIDA-------NGILNVSAIEKSTNKENKITITNDKGRLS 526
+A R+ +R R A + ++ +I+ +G+ + + NK+ + G +
Sbjct: 140 QAHREASRERKALIAAKLEKNIEKELVKRLKSGVYGDQPLNVNEEIWNKVLAARE-GLID 198
Query: 525 KEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 358
+ E E EAE ++ ++D+ ++E ++ L S S E+E+ E SD D+
Sbjct: 199 EGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEESSESESDEDE 255
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 26.2 bits (55), Expect = 5.6
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = -1
Query: 603 LNVS--AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 430
+NVS +EK T + +I + + + + M+++ +K R+ DDK E IQA +
Sbjct: 288 INVSEHTVEKVTIFDIRINTEDPRHSQIRSFLATMMSQ-DKIRSIDDKLTELIQAITYSQ 346
Query: 429 SYCFSMKSTMED--EKLKEKISDS--DKQTILDKCN 334
S MK E E + E I D + +LD N
Sbjct: 347 SKYDFMKKFSESPIEFINEWIESQSRDLEIVLDGTN 382
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -1
Query: 546 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 370
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 369 DSDKQT 352
+D+ T
Sbjct: 695 -TDRLT 699
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 5.6
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -1
Query: 597 VSAIEKSTNKENKITITNDKGRLSKEEI--ERMVNEAEKYRNEDDKQKETIQAKNALESY 424
V ++K +K++K N + E+ E ++EK ++ K + KNA ++
Sbjct: 70 VVPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDAL 129
Query: 423 CFSMKSTMEDEKLKEKISDSDKQTILDKCND 331
M DE+ E S K+ K D
Sbjct: 130 ADDMDDLSLDEEESESSEKSKKKKKKSKSKD 160
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 5.6
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = -1
Query: 603 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN--EAEKYRNEDDKQKETIQAK-NAL 433
LNV +K N+IT T D S++E + N ++ D + + A
Sbjct: 10 LNVMKKKKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIYGF 69
Query: 432 ESYCFSMKSTMEDEKLKEKISDSDKQ 355
+ + SMKS ++ +++ D++
Sbjct: 70 DEFYDSMKSAEREQMELKRLESKDRR 95
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 5.6
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -1
Query: 558 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 382
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 381 EKISDSDKQTILDKC 337
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 528 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 406
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 661 PGGI-PVSSNLPSKXVIFWVIARLTLKILGMXYSGV 765
PGGI + +PSK V FW++ L + + G+
Sbjct: 83 PGGILQETEKIPSKKVAFWLLGSSALVLAIVVVGGI 118
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 540 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 430
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -1
Query: 525 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 346
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 345 D 343
D
Sbjct: 451 D 451
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 579 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 418
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 251 KCLPILSACAHTPPXSASWLESSHLMVSLHLSRMV 355
+CL IL A H P + WL H+++ LH MV
Sbjct: 174 RCLLIL-AVLHIP-VALIWLNLEHILIFLHQDPMV 206
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -1
Query: 525 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 346
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 345 DKC 337
D C
Sbjct: 754 DGC 756
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 444 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 319
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 582 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 454
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -1
Query: 612 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 472
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,709,676
Number of Sequences: 5004
Number of extensions: 48209
Number of successful extensions: 253
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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