Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L02
(791 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 378 e-105
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 378 e-105
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 378 e-105
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 376 e-104
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 376 e-104
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 361 e-100
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 277 6e-75
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 140 7e-34
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 139 2e-33
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 139 2e-33
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 139 2e-33
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 139 2e-33
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 138 3e-33
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 138 5e-33
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 137 7e-33
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 136 1e-32
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 66 3e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 2e-10
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.29
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.29
At2g40070.1 68415.m04923 expressed protein 33 0.29
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.5
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy... 29 2.7
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 4.7
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.2
At1g68080.1 68414.m07777 expressed protein 28 6.2
At1g62870.1 68414.m07099 expressed protein 28 6.2
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.2
At3g26855.1 68416.m03360 hypothetical protein 28 8.2
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 378 bits (931), Expect = e-105
Identities = 173/217 (79%), Positives = 190/217 (87%), Gaps = 1/217 (0%)
Frame = -3
Query: 783 PTYTNLXXSSDRXLLD-HCFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKA 607
PTYTNL + + DGALNV EFQTNLVPYPRIHF L +YAPVISAEKA
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 606 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 427
+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTI
Sbjct: 282 FHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTI 341
Query: 426 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 247
QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAK
Sbjct: 342 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAK 401
Query: 246 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 136
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 378 bits (931), Expect = e-105
Identities = 173/217 (79%), Positives = 190/217 (87%), Gaps = 1/217 (0%)
Frame = -3
Query: 783 PTYTNLXXSSDRXLLD-HCFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKA 607
PTYTNL + + DGALNV EFQTNLVPYPRIHF L +YAPVISAEKA
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 606 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 427
+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTI
Sbjct: 282 FHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTI 341
Query: 426 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 247
QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAK
Sbjct: 342 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAK 401
Query: 246 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 136
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 378 bits (931), Expect = e-105
Identities = 173/217 (79%), Positives = 190/217 (87%), Gaps = 1/217 (0%)
Frame = -3
Query: 783 PTYTNLXXSSDRXLLD-HCFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKA 607
PTYTNL + + DGALNV EFQTNLVPYPRIHF L +YAPVISAEKA
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 606 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 427
+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTI
Sbjct: 282 FHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTI 341
Query: 426 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 247
QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAK
Sbjct: 342 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAK 401
Query: 246 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 136
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 376 bits (924), Expect = e-104
Identities = 172/217 (79%), Positives = 187/217 (86%), Gaps = 1/217 (0%)
Frame = -3
Query: 783 PTYTNLXXSSDRXLLD-HCFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKA 607
PTYTNL + + DGA+NV EFQTNLVPYPRIHF L +YAPVISA KA
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKA 281
Query: 606 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 427
YHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+
Sbjct: 282 YHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTV 341
Query: 426 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 247
QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAK
Sbjct: 342 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAK 401
Query: 246 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 136
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 376 bits (924), Expect = e-104
Identities = 172/217 (79%), Positives = 187/217 (86%), Gaps = 1/217 (0%)
Frame = -3
Query: 783 PTYTNLXXSSDRXLLD-HCFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKA 607
PTYTNL + + DGA+NV EFQTNLVPYPRIHF L +YAPVISA KA
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKA 281
Query: 606 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 427
YHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+
Sbjct: 282 YHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTV 341
Query: 426 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 247
QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAK
Sbjct: 342 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAK 401
Query: 246 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 136
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 361 bits (889), Expect = e-100
Identities = 164/215 (76%), Positives = 182/215 (84%), Gaps = 1/215 (0%)
Frame = -3
Query: 783 PTYTNLXXSSDRXLLD-HCFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKA 607
PTY+NL + + DGA+NV EFQTNLVPYPRIHF L +YAPVIS+ KA
Sbjct: 222 PTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKA 281
Query: 606 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 427
YHEQ SV EIT + FEP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTI
Sbjct: 282 YHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTI 341
Query: 426 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 247
QFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+K
Sbjct: 342 QFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSK 401
Query: 246 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 142
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 277 bits (679), Expect = 6e-75
Identities = 127/165 (76%), Positives = 140/165 (84%), Gaps = 1/165 (0%)
Frame = -3
Query: 783 PTYTNLXXSSDRXLLD-HCFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKA 607
PTYTNL + + DGALNV EFQTNLVPYPRIHF L +YAPVISAEKA
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 606 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 427
+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTI
Sbjct: 282 FHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTI 341
Query: 426 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 292
QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 342 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 140 bits (340), Expect = 7e-34
Identities = 65/195 (33%), Positives = 108/195 (55%)
Frame = -3
Query: 732 CFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 553
C G LN + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 239 CSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAK 298
Query: 552 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 373
N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+W P K + P
Sbjct: 299 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIP 358
Query: 372 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 193
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 359 PT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 410
Query: 192 EAREDLAALEKDYEE 148
EA ++ L +Y++
Sbjct: 411 EAESNMNDLVSEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 139 bits (337), Expect = 2e-33
Identities = 64/195 (32%), Positives = 108/195 (55%)
Frame = -3
Query: 732 CFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 553
C G LN + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSK 297
Query: 552 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 373
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 372 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 193
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 192 EAREDLAALEKDYEE 148
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 139 bits (337), Expect = 2e-33
Identities = 64/195 (32%), Positives = 108/195 (55%)
Frame = -3
Query: 732 CFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 553
C G LN + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSK 297
Query: 552 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 373
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 372 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 193
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 192 EAREDLAALEKDYEE 148
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 139 bits (337), Expect = 2e-33
Identities = 64/195 (32%), Positives = 108/195 (55%)
Frame = -3
Query: 732 CFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 553
C G LN + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAK 297
Query: 552 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 373
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 372 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 193
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 192 EAREDLAALEKDYEE 148
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 139 bits (336), Expect = 2e-33
Identities = 64/195 (32%), Positives = 108/195 (55%)
Frame = -3
Query: 732 CFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 553
C G LN + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAK 297
Query: 552 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 373
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 372 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 193
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 192 EAREDLAALEKDYEE 148
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 138 bits (335), Expect = 3e-33
Identities = 65/195 (33%), Positives = 107/195 (54%)
Frame = -3
Query: 732 CFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 553
C G LN + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 239 CSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSK 298
Query: 552 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 373
N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+W P K + P
Sbjct: 299 NMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIP 358
Query: 372 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 193
P ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 359 P--------KGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 410
Query: 192 EAREDLAALEKDYEE 148
EA ++ L +Y++
Sbjct: 411 EAESNMNDLVAEYQQ 425
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 138 bits (333), Expect = 5e-33
Identities = 65/195 (33%), Positives = 108/195 (55%)
Frame = -3
Query: 732 CFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 553
C G LN + NL+P+PR+HF +V +AP+ S + LSV E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAK 297
Query: 552 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 373
N M DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSV---- 353
Query: 372 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 193
+ P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 354 CDIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 192 EAREDLAALEKDYEE 148
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVAEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 137 bits (332), Expect = 7e-33
Identities = 64/195 (32%), Positives = 108/195 (55%)
Frame = -3
Query: 732 CFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 553
C G LN + NL+P+PR+HF +V +AP+ S + LSV E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAK 297
Query: 552 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 373
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSV---- 353
Query: 372 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 193
+ P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 354 CDIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 192 EAREDLAALEKDYEE 148
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVAEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 136 bits (330), Expect = 1e-32
Identities = 63/195 (32%), Positives = 107/195 (54%)
Frame = -3
Query: 732 CFFEXDGALNVTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 553
C G LN + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSK 297
Query: 552 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 373
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV---- 353
Query: 372 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 193
+ P G + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 354 CDIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 192 EAREDLAALEKDYEE 148
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 66.1 bits (154), Expect = 3e-11
Identities = 45/186 (24%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Frame = -3
Query: 678 NLVPYPRIHFPLVTYAPVISAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GK 517
+L+P PR HF + Y P+ +A + +V ++ + N MV R+ K
Sbjct: 259 SLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAK 318
Query: 516 YMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 337
Y++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V ++ +
Sbjct: 319 YISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL 378
Query: 336 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAA 169
ML++ T+I ++R ++D + K+AF+ Y M + EF E+R+ + +
Sbjct: 379 -----MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIES 433
Query: 168 LEKDYE 151
L +Y+
Sbjct: 434 LVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 63.3 bits (147), Expect = 2e-10
Identities = 43/186 (23%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Frame = -3
Query: 678 NLVPYPRIHFPLVTYAPVISAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GK 517
+L+P PR HF + Y P+ +A + +V ++ + N MV R+ K
Sbjct: 259 SLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAK 318
Query: 516 YMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 337
Y++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V ++ +
Sbjct: 319 YISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL 378
Query: 336 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAA 169
ML++ T+I +++ ++D + K+AF+ Y M + EF E+R+ + +
Sbjct: 379 -----MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIES 433
Query: 168 LEKDYE 151
L +Y+
Sbjct: 434 LVDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 281 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 174
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 457 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 564
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 32.7 bits (71), Expect = 0.29
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = -1
Query: 665 TPVSTS-HWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTV 489
TP+S S S +R + +PT ++ S S T S+P T +A P ++T L+ T
Sbjct: 236 TPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTR-STPSTTTKSAGPSRSTTPLSRS-TA 293
Query: 488 VTSYPRM*TRPSLPSKPSVLSNSSTGVQPV-SRSVSTTSHPP 366
+S P +RP+LP ++ +S+ +P+ S S +TT+ P
Sbjct: 294 RSSTPT--SRPTLPPSKTISRSSTPTRRPIASASAATTTANP 333
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 376 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 480
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
cytochrome P450 SP:O48927 from [Glycine max]
Length = 535
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3
Query: 678 NLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 568
NL+P PR FPLV + S+ A+ SVAE++NA
Sbjct: 72 NLIPGPR-GFPLVGSMSLRSSHVAHQRIASVAEMSNA 107
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 153 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 269
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 492 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 349
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 418 DELDSTLGFDGSDGRVHILGYDVTTVQ 498
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 683 RLTWCLTPVSTSHWSRTRQSSLPRR--PTMNSFPSPRSQTHASSPP 552
R + C S S+ SRT L R P NS P P S S PP
Sbjct: 80 RCSLCDAVFSASNPSRTASEHLKRGTCPNFNSLPKPISTISPSPPP 125
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 66 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 227
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 228 TSA 236
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 260 SCTPSVLSCTGTSVRVWRRESSPK 189
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,688,501
Number of Sequences: 28952
Number of extensions: 382092
Number of successful extensions: 1448
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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