Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L01
(1093 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 44 5e-05
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.37
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.37
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.86
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.0
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 4.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 6.1
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 6.1
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 6.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 6.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.6 bits (98), Expect = 5e-05
Identities = 17/32 (53%), Positives = 17/32 (53%)
Frame = -3
Query: 203 PPPXXXXGXPPPPXXXXGGGGXGGPPPXXPPP 108
PPP G PPPP G G G PPP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1
Query: 202 PPPXXXXGAPPPPXXXXG-GGXXGGPPPXPPPXXXGG 95
PPP G PPPP G G PPP PPP G
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 33.5 bits (73), Expect = 0.053
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 97 PPXXGGGXXGGGPPXPPPPXXXXGGGG 177
PP G G GPP PPPP GG
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 31.9 bits (69), Expect = 0.16
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -1
Query: 205 PPPPXXXXG--APPPPXXXXGGGXXGGPPPXPPPXXXGG 95
PPPP AP P GGPPP PPP G
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG 772
Score = 31.1 bits (67), Expect = 0.28
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -3
Query: 206 PPPPXXXXGXPPPPXX--XXGGGGXGGPPPXXPPP 108
PPP G PPPP G GPPP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAG----AGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.37
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 76 LXGXXXGPPXXGGGXXGGGPPXPPPPXXXXGGG 174
+ G PP G G PP PPPP GG
Sbjct: 757 IMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 30.3 bits (65), Expect = 0.49
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 127 GGPPXPPPPXXXXGGGGXP 183
GGPP PPPP G G P
Sbjct: 759 GGPPPPPPPPGVAGAGPPP 777
Score = 30.3 bits (65), Expect = 0.49
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 96 PPXXXGGGXGGGPPXXPPPXXXXGGGGA 179
PP G G GPP PPP GG+
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 6/38 (15%)
Frame = -1
Query: 205 PPPPXXXXGA------PPPPXXXXGGGXXGGPPPXPPP 110
PPPP GA PPPP GG P P P
Sbjct: 764 PPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 233 PPPPPPPPXXXXXXXXFXXGGGGXXPPP 316
PPPPPPPP G G PPP
Sbjct: 761 PPPPPPPP---------GVAGAGPPPPP 779
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 206 PPPPXXXXGXPPPPXXXXGGGGXGGPPPXXPPP 108
PPPP PPPP GG P P
Sbjct: 765 PPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 126 GGPPXXPPPXXXXGGGGAP 182
GGPP PPP G G P
Sbjct: 759 GGPPPPPPPPGVAGAGPPP 777
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 775 PPPPPPPP 782
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 776 PPPPPPPP 783
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -3
Query: 650 PPXPXXXXPPPXTXKKXKXXXXGXPPPPXXP 558
PP P PPP PPPP P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.37
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 181 GAPPPPXXXXGGGXXGGPPPXPPP 110
G PPPP G PPP PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 182 GXPPPPXXXXGGGGXGGPPPXXPP 111
G PPPP G PPP PP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -1
Query: 136 GGPPPXPPPXXXGGPXFXPXXRXVIPPSRG 47
G PPP PPP P F P + PP G
Sbjct: 7 GNPPPPPPP-----PGFEPPSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.37
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = -1
Query: 205 PPPPXXXXGAPPPPXXXXGGGXXGGPPPXPPP--XXXGGPXFXPXXRXVIPP 56
PPPP PP G PPP PPP G P R PP
Sbjct: 313 PPPPPSRRNRGKPPIGN-GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP 363
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 94 GPPXXGGGXXGGGPPXPPPPXXXXGGGGXPXXXXG 198
G P G G P PPPP G P G
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG 357
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = -3
Query: 206 PPPPXXXXGXPPPPXXXXGGGGXGGPPPXXPPPXXGGPXFXPXXXEXNSPXXGP 45
PPPP PP G PP PPP P + S P
Sbjct: 313 PPPPPSRRNRGKPP--IGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 233 PPPPPPPPXXXXXXXXFXXGGGGXXPPP 316
PPPPPPP G PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.86
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Frame = -1
Query: 205 PPPPXXXXGAPPPPXXXXGGGXXGGP---PPXPPPXXXGGPXFXPXXRXVIP-PSRGLKL 38
PP P G PP P G P PP P P P P +P PS GL
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 37 TAXPS 23
P+
Sbjct: 1229 VPVPT 1233
Score = 27.1 bits (57), Expect = 4.6
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = -1
Query: 205 PPPPXXXXGAPPPPXXXXGGGXXGGPPPXPPPXXXGGPXFXPXXRXVIP-PSRGLKLTAX 29
PP P APP P G PP P P P P +P PS G+
Sbjct: 1159 PPVPKPSVAAPPVP------APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 28 PS 23
PS
Sbjct: 1213 PS 1214
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 205 PPPPXXXXGAPPPPXXXXGGGXXGGPPPXPPP 110
P PP PPPP GPP PPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPP---MPAGPPSAPPP 1733
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 206 PPPPXXXXGXPPPPXXXXGGGGXGGPPPXXPPP 108
P PP PPPP GPP PPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPP---MPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -1
Query: 202 PPPXXXXGAPPPPXXXXGGGXXGGPPPXPP 113
PPP PPP G PPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = -3
Query: 650 PPXPXXXXPPPXTXKKXKXXXXGXPPPP 567
PP P PPP + PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 114 GGXGGGPPXXPPPXXXXGGGGAPXXXXGGGG 206
GG GGPP P GG G GG G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHG 224
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 100 PXXGGGXXGGGPPXPPPP 153
P G GG PP PPPP
Sbjct: 295 PSSGDSANGGLPPPPPPP 312
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 233 PPPPPPPP 256
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,757,050
Number of Sequences: 5004
Number of extensions: 27387
Number of successful extensions: 439
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 290
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 575740598
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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