Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K24
         (794 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    32   0.11 
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos...    31   0.25 
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo...    29   0.77 
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ...    28   1.8  
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr...    27   4.1  
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual    26   5.4  
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||...    26   7.1  
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||...    26   7.1  
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual     25   9.4  

>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 31.9 bits (69), Expect = 0.11
 Identities = 24/87 (27%), Positives = 33/87 (37%)
 Frame = -1

Query: 731  LPXAYSQTSALPPSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPR 552
            +P      + +PP   PS  P   PVP                   + P  G    P+P 
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAP---PVPKPSVGVPPVPPPSTAPPVPT-PSAGLPPVPVPT 1233

Query: 551  REAHPVPSRKGRAVPS*HPRRQAIPSP 471
             +A PVP+    A PS    R ++PSP
Sbjct: 1234 AKAPPVPAPSSEA-PSVSTPRSSVPSP 1259


>SPBC11B10.05c |rsp1||random septum position protein
           Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 494

 Score = 30.7 bits (66), Expect = 0.25
 Identities = 21/53 (39%), Positives = 24/53 (45%)
 Frame = -3

Query: 615 PSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 457
           PS     FR P+    PP   SRS S +  +   RSQL   S     STS ST
Sbjct: 301 PSKPEIPFRHPTSKPLPPKPLSRSKSSSLSRNQTRSQLNDLS-AENDSTSNST 352


>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
           Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 650

 Score = 29.1 bits (62), Expect = 0.77
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -1

Query: 779 RIXXGTSTSKGPXGQXLPXAYSQTSALPPSRSPSHTPVEKPVP 651
           R   G  TS  P  Q LP  +  T   PPS +    P  +P P
Sbjct: 393 RFSYGQHTSNVPSTQKLPSNFRVTQGAPPSHTYGPPPPVQPKP 435


>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1420

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = -3

Query: 684 PVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQC--PPLTPSRSTSRTQ*KRPCR 511
           P+P P        P + T T+Q P  SR+     S+     PP TPS+   R       R
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQ-PPRPPTNASTR 292

Query: 510 SQLTSPSTGHTQSTSRS 460
           S  TS S  H+  +  S
Sbjct: 293 STGTSSSMAHSYDSPPS 309


>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 749

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = -1

Query: 740 GQXLPX---AYSQTSALPPSRSPSH 675
           GQ LP    AY   ++LPPS  PSH
Sbjct: 118 GQFLPDDANAYGPKASLPPSEMPSH 142


>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1828

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 521  LFYWVRDVLLDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFN 643
            L Y++ D+     RG H+  D +    L MD   A+N YFN
Sbjct: 1546 LIYFILDIFQ--FRGLHFAYDEIDTDQLSMDLQDALNAYFN 1584


>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 673

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 782 PRIXXGTSTSKGPXGQXLPXAYSQTSALPPSRSPSH 675
           P +    +TS+ P G     A S TS+   S +P+H
Sbjct: 624 PTVMSAATTSRAPSGTTSGTASSTTSSSVASATPTH 659


>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 673

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 782 PRIXXGTSTSKGPXGQXLPXAYSQTSALPPSRSPSH 675
           P +    +TS+ P G     A S TS+   S +P+H
Sbjct: 624 PTVMSAATTSRAPSGTTSGTASSTTSSSVASATPTH 659


>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 319

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 761 STSKGPXGQXLPXAYSQTSALPPSRSPSHTPVEK 660
           S SKG  G  LP  ++   A P + +  HT + K
Sbjct: 163 SYSKGIDGTALPSTHANPVAAPSTATTQHTQLPK 196


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,353,127
Number of Sequences: 5004
Number of extensions: 40009
Number of successful extensions: 157
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)