Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K24
(794 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 35 0.29
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 35 0.29
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 35 0.29
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 35 0.29
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 35 0.29
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 35 0.29
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 34 0.68
AK124971-1|BAC86011.1| 172|Homo sapiens protein ( Homo sapiens ... 32 2.1
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 32 2.7
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 3.6
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 3.6
AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa varia... 31 4.8
AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa varia... 31 4.8
AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens ... 31 4.8
AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein... 31 4.8
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 6.3
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 6.3
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 6.3
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 6.3
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 6.3
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 6.3
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 6.3
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 30 8.4
Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein. 30 8.4
X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein. 30 8.4
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 30 8.4
CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein. 30 8.4
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 30 8.4
BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.4
BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.4
BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.4
BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.4
BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.4
BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.4
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2... 30 8.4
BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.4
BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.4
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 30 8.4
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 30 8.4
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 30 8.4
AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 8.4
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 8.4
AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 8.4
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 8.4
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein. 30 8.4
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein. 30 8.4
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro... 30 8.4
AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein. 30 8.4
AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein pro... 30 8.4
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 30 8.4
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 35.1 bits (77), Expect = 0.29
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = -3
Query: 669 GRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 490
GR S + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 571 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 629
Query: 489 TGHTQSTSRSTCLCTLRSPYRTQLR 415
+S SRS + RS RT R
Sbjct: 630 PVRRRSRSRSPARRSGRSRSRTPAR 654
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 35.1 bits (77), Expect = 0.29
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = -3
Query: 669 GRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 490
GR S + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 571 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 629
Query: 489 TGHTQSTSRSTCLCTLRSPYRTQLR 415
+S SRS + RS RT R
Sbjct: 630 PVRRRSRSRSPARRSGRSRSRTPAR 654
Score = 31.5 bits (68), Expect = 3.6
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = -3
Query: 603 RSQFRTP-----SRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCT 445
RS+ RTP SR + PP+T RS SRT +R RS+ TSP T +S SR++ +
Sbjct: 1934 RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR-TSPIT-RRRSRSRTSPVTR 1991
Query: 444 LRSPYRT 424
RS RT
Sbjct: 1992 RRSRSRT 1998
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -3
Query: 591 RTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 424
R SR + PP+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 1920 RRRSRSRTPPVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 1974
Score = 31.1 bits (67), Expect = 4.8
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Frame = -3
Query: 603 RSQFRTP------SRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLC 448
RS+ RTP SR + PP+T RS SRT +R RS+ TSP T +S SR++ +
Sbjct: 1945 RSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVT 2002
Query: 447 TLRSPYRT 424
RS RT
Sbjct: 2003 RRRSRSRT 2010
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 35.1 bits (77), Expect = 0.29
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = -3
Query: 669 GRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 490
GR S + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 571 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 629
Query: 489 TGHTQSTSRSTCLCTLRSPYRTQLR 415
+S SRS + RS RT R
Sbjct: 630 PVRRRSRSRSPARRSGRSRSRTPAR 654
Score = 31.5 bits (68), Expect = 3.6
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = -3
Query: 603 RSQFRTP-----SRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCT 445
RS+ RTP SR + PP+T RS SRT +R RS+ TSP T +S SR++ +
Sbjct: 1934 RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR-TSPIT-RRRSRSRTSPVTR 1991
Query: 444 LRSPYRT 424
RS RT
Sbjct: 1992 RRSRSRT 1998
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -3
Query: 591 RTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 424
R SR + PP+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 1920 RRRSRSRTPPVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 1974
Score = 31.1 bits (67), Expect = 4.8
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Frame = -3
Query: 603 RSQFRTP------SRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLC 448
RS+ RTP SR + PP+T RS SRT +R RS+ TSP T +S SR++ +
Sbjct: 1945 RSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVT 2002
Query: 447 TLRSPYRT 424
RS RT
Sbjct: 2003 RRRSRSRT 2010
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 35.1 bits (77), Expect = 0.29
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = -3
Query: 669 GRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 490
GR S + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 536 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 594
Query: 489 TGHTQSTSRSTCLCTLRSPYRTQLR 415
+S SRS + RS RT R
Sbjct: 595 PVRRRSRSRSPARRSGRSRSRTPAR 619
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 35.1 bits (77), Expect = 0.29
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = -3
Query: 669 GRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 490
GR S + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 361 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 419
Query: 489 TGHTQSTSRSTCLCTLRSPYRTQLR 415
+S SRS + RS RT R
Sbjct: 420 PVRRRSRSRSPARRSGRSRSRTPAR 444
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 35.1 bits (77), Expect = 0.29
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = -3
Query: 669 GRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 490
GR S + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 619 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 677
Query: 489 TGHTQSTSRSTCLCTLRSPYRTQLR 415
+S SRS + RS RT R
Sbjct: 678 PVRRRSRSRSPARRSGRSRSRTPAR 702
Score = 31.5 bits (68), Expect = 3.6
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = -3
Query: 603 RSQFRTP-----SRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCT 445
RS+ RTP SR + PP+T RS SRT +R RS+ TSP T +S SR++ +
Sbjct: 1982 RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR-TSPIT-RRRSRSRTSPVTR 2039
Query: 444 LRSPYRT 424
RS RT
Sbjct: 2040 RRSRSRT 2046
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -3
Query: 591 RTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 424
R SR + PP+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 1968 RRRSRSRTPPVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 2022
Score = 31.1 bits (67), Expect = 4.8
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Frame = -3
Query: 603 RSQFRTP------SRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLC 448
RS+ RTP SR + PP+T RS SRT +R RS+ TSP T +S SR++ +
Sbjct: 1993 RSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVT 2050
Query: 447 TLRSPYRT 424
RS RT
Sbjct: 2051 RRRSRSRT 2058
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 33.9 bits (74), Expect = 0.68
Identities = 25/72 (34%), Positives = 33/72 (45%)
Frame = -3
Query: 672 PGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSP 493
P + AL P L + P S T S Y C PL S +T T P LTSP
Sbjct: 10 PAPRPPALRPCPPPLRGR-PGSSTELAPTISHYDCSPLD-STATPSTPGTAPPPKVLTSP 67
Query: 492 STGHTQSTSRST 457
+T T ++S++T
Sbjct: 68 ATTPTATSSKAT 79
>AK124971-1|BAC86011.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ42981 fis, clone BRTHA2007422. ).
Length = 172
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 602 EASSVPRQGTSARPLPRREAHPVPSRKGRAVPS*HP 495
EA R G + P PR+ HP+P + +P+ HP
Sbjct: 20 EAPGATRVGPPSTPAPRKVRHPLPPSQAGILPALHP 55
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 31.9 bits (69), Expect = 2.7
Identities = 31/92 (33%), Positives = 42/92 (45%)
Frame = -3
Query: 690 EKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 511
++P+PY S+ L T + S SRS R+ SR + SRS R++ +
Sbjct: 611 KRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSR----SWSRSRSRRRSRTRTSSS 666
Query: 510 SQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 415
S SPS G S SRS RS R+Q R
Sbjct: 667 SSSRSPSPG---SRSRSRSRSRSRSRSRSQSR 695
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.5 bits (68), Expect = 3.6
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = -3
Query: 603 RSQFRTP-----SRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCT 445
RS+ RTP SR + PP+T RS SRT +R RS+ TSP T +S SR++ +
Sbjct: 966 RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR-TSPIT-RRRSRSRTSPVTR 1023
Query: 444 LRSPYRT 424
RS RT
Sbjct: 1024 RRSRSRT 1030
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -3
Query: 591 RTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 424
R SR + PP+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 952 RRRSRSRTPPVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 1006
Score = 31.1 bits (67), Expect = 4.8
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Frame = -3
Query: 603 RSQFRTP------SRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLC 448
RS+ RTP SR + PP+T RS SRT +R RS+ TSP T +S SR++ +
Sbjct: 977 RSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVT 1034
Query: 447 TLRSPYRT 424
RS RT
Sbjct: 1035 RRRSRSRT 1042
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 31.5 bits (68), Expect = 3.6
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = -3
Query: 603 RSQFRTP-----SRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCT 445
RS+ RTP SR + PP+T RS SRT +R RS+ TSP T +S SR++ +
Sbjct: 457 RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR-TSPIT-RRRSRSRTSPVTR 514
Query: 444 LRSPYRT 424
RS RT
Sbjct: 515 RRSRSRT 521
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -3
Query: 591 RTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 424
R SR + PP+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 443 RRRSRSRTPPVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 497
Score = 31.1 bits (67), Expect = 4.8
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Frame = -3
Query: 603 RSQFRTP------SRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLC 448
RS+ RTP SR + PP+T RS SRT +R RS+ TSP T +S SR++ +
Sbjct: 468 RSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVT 525
Query: 447 TLRSPYRT 424
RS RT
Sbjct: 526 RRRSRSRT 533
>AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 507
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 462 FSMWTGYGLSTGMLTGNGTAFSTGYG 539
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 508
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 462 FSMWTGYGLSTGMLTGNGTAFSTGYG 539
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ10655 fis, clone NT2RP2005933, weakly similar to
NUCLEOPORIN NUP57. ).
Length = 484
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 462 FSMWTGYGLSTGMLTGNGTAFSTGYG 539
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein
protein.
Length = 505
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 462 FSMWTGYGLSTGMLTGNGTAFSTGYG 539
F TG+G +TG TG GT TG G
Sbjct: 60 FGFGTGFGTTTGTSTGLGTGLGTGLG 85
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = -1
Query: 716 SQTSALPPSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHP 537
S + A PP R TP P R + + R+ + + P RR A P
Sbjct: 560 SPSPAPPPRRR--RTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP 617
Query: 536 VPSRKGRAVPS*HPRRQAIPSP 471
P K RA PS P+R+ SP
Sbjct: 618 PPPPKRRASPSPPPKRRVSHSP 639
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = -1
Query: 716 SQTSALPPSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHP 537
S + A PP R TP P R + + R+ + + P RR A P
Sbjct: 560 SPSPAPPPRRR--RTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP 617
Query: 536 VPSRKGRAVPS*HPRRQAIPSP 471
P K RA PS P+R+ SP
Sbjct: 618 PPPPKRRASPSPPPKRRVSHSP 639
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = -1
Query: 716 SQTSALPPSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHP 537
S + A PP R TP P R + + R+ + + P RR A P
Sbjct: 569 SPSPAPPPRRR--RTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP 626
Query: 536 VPSRKGRAVPS*HPRRQAIPSP 471
P K RA PS P+R+ SP
Sbjct: 627 PPPPKRRASPSPPPKRRVSHSP 648
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = -1
Query: 716 SQTSALPPSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHP 537
S + A PP R TP P R + + R+ + + P RR A P
Sbjct: 560 SPSPAPPPRRR--RTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP 617
Query: 536 VPSRKGRAVPS*HPRRQAIPSP 471
P K RA PS P+R+ SP
Sbjct: 618 PPPPKRRASPSPPPKRRVSHSP 639
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = -1
Query: 716 SQTSALPPSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHP 537
S + A PP R TP P R + + R+ + + P RR A P
Sbjct: 569 SPSPAPPPRRR--RTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP 626
Query: 536 VPSRKGRAVPS*HPRRQAIPSP 471
P K RA PS P+R+ SP
Sbjct: 627 PPPPKRRASPSPPPKRRVSHSP 648
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = -1
Query: 716 SQTSALPPSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHP 537
S + A PP R TP P R + + R+ + + P RR A P
Sbjct: 558 SPSPAPPPRRR--RTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP 615
Query: 536 VPSRKGRAVPS*HPRRQAIPSP 471
P K RA PS P+R+ SP
Sbjct: 616 PPPPKRRASPSPPPKRRVSHSP 637
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = -1
Query: 716 SQTSALPPSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHP 537
S + A PP R TP P R + + R+ + + P RR A P
Sbjct: 558 SPSPAPPPRRR--RTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP 615
Query: 536 VPSRKGRAVPS*HPRRQAIPSP 471
P K RA PS P+R+ SP
Sbjct: 616 PPPPKRRASPSPPPKRRVSHSP 637
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 907 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 938
>Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein.
Length = 513
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGY 536
+S CT T WTGY ST LT +S G+
Sbjct: 404 YSSCTVTTVQPWTGYPTSTSPLTSPRGPWSLGW 436
>X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 539
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 552 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 415
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 539
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 552 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 415
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 539
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 539
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 539
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 539
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 539
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 539
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 539
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 438 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 539
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 552 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 415
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 552 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 415
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 552 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 415
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
protein.
Length = 1113
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 641 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 672
>AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein.
Length = 699
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 633 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 664
>AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein
protein.
Length = 757
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 532 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
PV VP PV +PV P P+ + +P IE+
Sbjct: 285 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 316
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 552 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 415
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 369 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 414
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,232,497
Number of Sequences: 237096
Number of extensions: 1627274
Number of successful extensions: 6643
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 5492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6499
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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