Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K24
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 34 0.13
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ... 33 0.24
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 32 0.54
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 31 0.72
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 31 0.72
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 31 0.95
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 31 0.95
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 31 1.3
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 30 2.2
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.9
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.9
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 2.9
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 2.9
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 28 8.9
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 28 8.9
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 28 8.9
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.9
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 33.9 bits (74), Expect = 0.13
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = -3
Query: 732 PTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTP 553
P PGI + PV P P TS + +TA P + ++Q + P P TP
Sbjct: 65 PHPGIPSSSYHPPVSTPTPTAAPTTSLSSTIVRNMTA--PLLHQNQ-KPPKNLNSRPSTP 121
Query: 552 SRSTSRTQ*KR-PCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 415
S++ KR P L + ST T + SR + L S R QL+
Sbjct: 122 QTSSNLNTPKRTPQVKNLQAEST--TPTVSRPSSEVDLTSFRRNQLQ 166
>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
protein C07H6.3 protein.
Length = 1378
Score = 33.1 bits (72), Expect = 0.24
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 4/118 (3%)
Frame = -3
Query: 750 RSMXTXPTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQ 571
R T T G P + +E P R + L+ PS S + F + +R
Sbjct: 223 RYQTTVATRGDLPPKHTITMETTPAQPSRNSLLRRSLRSPAKIIHPSASTTSFTSSARLS 282
Query: 570 CPP---LTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQL-RYR 409
PP T ++S S + P L SPS G S SR +LR+P + RYR
Sbjct: 283 TPPRPTTTAAQSLSLAP-QTPSPLSLPSPSGGQ-MSRSRDLTRSSLRAPAGISISRYR 338
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.41
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = -3
Query: 612 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSP 433
S SRS+ R+ R + + SRS SR++ P RS+ S S ++S SRS RSP
Sbjct: 212 SRSRSRSRSRDRRRSRSRSSSRSKSRSR-SPPKRSRRESKSKSRSRSRSRSADNRKSRSP 270
Query: 432 YRT 424
R+
Sbjct: 271 SRS 273
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.54
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 547 KHIPYPVEKAVPFPVNIPVDRPYPVHI 467
+H+P PV VP P+ +PV P P +
Sbjct: 154 QHVPVPVPVQVPVPIRVPVPVPVPTPV 180
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 31.5 bits (68), Expect = 0.72
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -3
Query: 684 PVPYPGRKTSA-LXPL-KYTLTAQCPSMSRSQFRTPSRYQC---PPLTPSRSTSRTQ*KR 520
P +P R T + PL K LT + S S F+ P Y+ PPL P STS
Sbjct: 1330 PKLHPRRMTQQPMSPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDVSSS 1389
Query: 519 PCRSQLTSPSTGHTQSTSR 463
P S TS +T Q R
Sbjct: 1390 PSTSGSTSSATKENQEQLR 1408
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 31.5 bits (68), Expect = 0.72
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -3
Query: 684 PVPYPGRKTSA-LXPL-KYTLTAQCPSMSRSQFRTPSRYQC---PPLTPSRSTSRTQ*KR 520
P +P R T + PL K LT + S S F+ P Y+ PPL P STS
Sbjct: 1330 PKLHPRRMTQQPMSPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDVSSS 1389
Query: 519 PCRSQLTSPSTGHTQSTSR 463
P S TS +T Q R
Sbjct: 1390 PSTSGSTSSATKENQEQLR 1408
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 31.1 bits (67), Expect = 0.95
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = -3
Query: 657 SALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHT 478
SA+ + T +++ S SRS+ R+ Q L +RS S + +R ++ SPS+ +
Sbjct: 75 SAIRSAQSTASSRSRSRSRSRSRSTMNQQIR-LARTRSASGGKLRRSRSARRRSPSSSAS 133
Query: 477 QSTSRSTCLCTLRSPYRTQLRYR 409
+S SRST +S +RYR
Sbjct: 134 RSRSRSTSRTRAQS---IPIRYR 153
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 31.1 bits (67), Expect = 0.95
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = -3
Query: 657 SALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHT 478
SA+ + T +++ S SRS+ R+ Q L +RS S + +R ++ SPS+ +
Sbjct: 75 SAIRSAQSTASSRSRSRSRSRSRSTMNQQIR-LARTRSASGGKLRRSRSARRRSPSSSAS 133
Query: 477 QSTSRSTCLCTLRSPYRTQLRYR 409
+S SRST +S +RYR
Sbjct: 134 RSRSRSTSRTRAQS---IPIRYR 153
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 541 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 449
+P PV + VP P+ +P+ P P+ + VPV
Sbjct: 15 VPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 538 PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 443
P PV VP PV +P+ P P+ + VPV +
Sbjct: 12 PVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 541 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 443
IP PV P P +PV P P+ + +PV +
Sbjct: 9 IPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/87 (25%), Positives = 34/87 (39%)
Frame = -3
Query: 747 SMXTXPTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQC 568
++ T T P TP PV T+ P+ T P++ TP+
Sbjct: 511 TVGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTS 570
Query: 567 PPLTPSRSTSRTQ*KRPCRSQLTSPST 487
T + +T+ TQ P +T+PST
Sbjct: 571 TTTTTTTTTTTTQ-TTPTTPVVTTPST 596
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = -3
Query: 738 TXPTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPL 559
T T P TP PV T+ P+ T P++ TP+
Sbjct: 635 TVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTT 694
Query: 558 TPSRSTSRTQ*KRPCRSQLTSPST 487
T + +T+ TQ P +T+PST
Sbjct: 695 TTTTTTTTTQ-TTPTTPVVTTPST 717
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = -3
Query: 738 TXPTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPL 559
T T P TP PV T+ P+ T P++ TP+
Sbjct: 691 TVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTT 750
Query: 558 TPSRSTSRTQ*KRPCRSQLTSPST 487
T + +T+ TQ P +T+PST
Sbjct: 751 TTTTTTTTTQ-TTPTTPVVTTPST 773
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 585 PSRY-QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYR 427
PSR+ Q PLTPS STS +Q P + SP G + T RS +P+R
Sbjct: 577 PSRHAQHSPLTPSTSTSSSQLLAPPK----SPQPGTSSQTFRSQASRLPIAPHR 626
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/75 (22%), Positives = 24/75 (32%)
Frame = -1
Query: 695 PSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHPVPSRKGR 516
P P P KP P + P+ +P P+ E P P K +
Sbjct: 169 PKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPK 228
Query: 515 AVPS*HPRRQAIPSP 471
P +P + P P
Sbjct: 229 PKPKPNPNPKPEPKP 243
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/75 (24%), Positives = 28/75 (37%)
Frame = -1
Query: 695 PSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHPVPSRKGR 516
P +P+ P KP P E P+ +P P+ E +P+P K +
Sbjct: 231 PKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPK 290
Query: 515 AVPS*HPRRQAIPSP 471
P P + P+P
Sbjct: 291 --PKHKPNSRPKPNP 303
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/75 (21%), Positives = 26/75 (34%)
Frame = -1
Query: 695 PSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHPVPSRKGR 516
P P P KP P + + P+ +P P+ + P P K +
Sbjct: 201 PEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLK 260
Query: 515 AVPS*HPRRQAIPSP 471
+ P P+ + P P
Sbjct: 261 SEPKPKPKLKPKPKP 275
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/75 (21%), Positives = 24/75 (32%)
Frame = -1
Query: 695 PSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHPVPSRKGR 516
P P P P P E P+ +P P + P P K +
Sbjct: 171 PKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPK 230
Query: 515 AVPS*HPRRQAIPSP 471
P+ +P+ + P P
Sbjct: 231 PKPNPNPKPEPKPKP 245
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/73 (23%), Positives = 22/73 (30%)
Frame = -1
Query: 695 PSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPLPRREAHPVPSRKGR 516
P P P KP P + P+ P P E P P K
Sbjct: 237 PKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKHKPN 296
Query: 515 AVPS*HPRRQAIP 477
+ P +PR + P
Sbjct: 297 SRPKPNPRPKPKP 309
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/109 (24%), Positives = 37/109 (33%)
Frame = -3
Query: 783 TPYTKXYKYQ*RSMXTXPTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMS 604
TP T +S T PT T P T+ P T P+
Sbjct: 334 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 393
Query: 603 RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 457
+ TP+ TP+ T+ T K + T ST T ST +S+
Sbjct: 394 TTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSS 442
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/109 (23%), Positives = 36/109 (33%)
Frame = -3
Query: 783 TPYTKXYKYQ*RSMXTXPTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMS 604
TP T +S T PT T P T+ P T P+
Sbjct: 347 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTM 406
Query: 603 RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 457
+S TP+ TP+ T+ + +SP+T T TS T
Sbjct: 407 KSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSPTTPTTMKTSSIT 455
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 547 KHIPYPVEKAV--PFPVNIPVDRPYPVHIEKHVPVHIEK 437
KH P P K + P P+ IP P+P + K +P H K
Sbjct: 189 KHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPK 227
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 538 PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 452
P P+ K +PFP +P +P P + K P
Sbjct: 238 PMPIPKPMPFPKPMPKPKPKPKPMPKPKP 266
>AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical
protein Y47D3A.5 protein.
Length = 222
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = -1
Query: 731 LPXAYSQTSAL-PPSRSPSHTPVEKPV---PXXXXXXXXXXXXXXXREASSVPRQGTSAR 564
LP S+ S L PP+++P HTP P P ++ SS P + T A
Sbjct: 75 LPRTPSRNSPLTPPTKTPPHTPTRTPTTESPVAPRTPGKVVISSVEKQESSAPDESTIA- 133
Query: 563 PLPRREAHPVPSRK 522
P++ + P +
Sbjct: 134 ATPKKSSKKSPKEQ 147
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Frame = -3
Query: 714 PNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRS------QFRTPSRYQCPPLTP 553
P + +P P P R+ + K + S S+S + R+PS + PP P
Sbjct: 302 PRRRRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAP 361
Query: 552 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSR 463
R+ SR+ K P + SPS + R
Sbjct: 362 KRAKSRS--KSPPARRRRSPSASKSPPAPR 389
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -3
Query: 606 SRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 457
SRS+ R+ SR + + SRS SR +R R + + + G ST++ T
Sbjct: 126 SRSRSRSRSRSRSRSYSRSRSGSRRSSRRRSRRRSSLKARGRRASTAKKT 175
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = -3
Query: 696 PVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRP 517
PV P P TSA P + +Q P MS + PS Q P L + +RP
Sbjct: 103 PVAPHQPPPQLATSAQPPQPPVINSQLPRMSPAPAIPPSMAQ-PLLQSPSPGADIAIRRP 161
Query: 516 CRSQLTSPS---TGHTQSTSRSTCLCT 445
+ + S TG + R+ +C+
Sbjct: 162 SKEKTDEKSVDETGGSDKKKRTEVICS 188
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -3
Query: 567 PPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLR 439
PP+ +R+ + + +RP R Q+ SP +G + + C+C R
Sbjct: 187 PPVVVTRAPAIIENERPWRGQVCSPQSG---CSGGAACICGAR 226
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.9 bits (59), Expect = 8.9
Identities = 29/113 (25%), Positives = 38/113 (33%)
Frame = -3
Query: 747 SMXTXPTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQC 568
SM P P P C P P+P P + P ++ P M P C
Sbjct: 24 SMGPPPCPPPPPPMCAPP---PLPCP---PPPICPPQF---CPPPPMCPPPPPPPPPPMC 74
Query: 567 PPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 409
PP P + PC+S +P + C C SP R R+R
Sbjct: 75 PPPPPPMPSYS-----PCQSYAPAPVFNQYAMQPANDCCCRCGSPCRFMARHR 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,211,412
Number of Sequences: 27780
Number of extensions: 242571
Number of successful extensions: 1078
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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