Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K24
(794 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40040.1 68415.m04920 defective chloroplasts and leaves prote... 35 0.072
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 33 0.17
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 33 0.17
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 31 0.67
At4g35785.2 68417.m05083 transformer serine/arginine-rich ribonu... 31 0.88
At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identic... 30 1.5
At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identic... 30 1.5
At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative stro... 30 2.0
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 29 2.7
At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family... 29 2.7
At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-l... 29 3.6
At2g16440.1 68415.m01883 DNA replication licensing factor, putat... 29 3.6
At5g04970.1 68418.m00526 pectinesterase, putative contains simil... 29 4.7
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 29 4.7
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 6.2
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 28 8.2
>At2g40040.1 68415.m04920 defective chloroplasts and leaves
protein-related / DCL protein-related similar to DCL
protein, chloroplast precursor (Defective chloroplasts
and leaves protein) (Swiss-Prot:Q42463) [Lycopersicon
esculentum]
Length = 839
Score = 34.7 bits (76), Expect = 0.072
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = -3
Query: 624 AQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLC- 448
AQ S S++Q ++ S+ Q + S+S S++Q + +SQ SPS TQS S++
Sbjct: 768 AQAQSPSQTQSQSQSQSQSQSQSQSQSQSQSQSQSQSQSQSQSPSQTQTQSPSQTQAQAQ 827
Query: 447 --TLRSPYRTQ 421
+ +SP +TQ
Sbjct: 828 SPSSQSPSQTQ 838
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 33.5 bits (73), Expect = 0.17
Identities = 25/68 (36%), Positives = 26/68 (38%)
Frame = +3
Query: 450 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYGMCFSXXXXXXXXXXXXXXXXFSTWTGTGRS 629
TGT TG G TG TG GT TG G + T TGTG
Sbjct: 138 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTG-GTGTGTGTG 196
Query: 630 TCTLTGXG 653
T T TG G
Sbjct: 197 TGTGTGTG 204
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 33.5 bits (73), Expect = 0.17
Identities = 25/68 (36%), Positives = 26/68 (38%)
Frame = +3
Query: 450 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYGMCFSXXXXXXXXXXXXXXXXFSTWTGTGRS 629
TGT TG G TG TG GT TG G + T TGTG
Sbjct: 138 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTG-GTGTGTGTG 196
Query: 630 TCTLTGXG 653
T T TG G
Sbjct: 197 TGTGTGTG 204
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 31.5 bits (68), Expect = 0.67
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = -3
Query: 699 TPVEKPVPYPGRKTSALXPLKYTLTAQCPSMS--RSQFRTPSR--YQCPPLTPSRSTSRT 532
+P PV R + PL+ + + + PS S RS R+ SR Q + SRS +R
Sbjct: 496 SPSRSPVRSASRGSLGRGPLRRS-SRRSPSRSPVRSSRRSLSRSPIQLSRRSLSRSPTRL 554
Query: 531 Q*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 415
+ RS + SP ++S RS+ RSP R+ R
Sbjct: 555 SRRSLSRSPIRSPRKSVSRSPVRSSRKSVSRSPVRSSRR 593
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 585 PSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 460
PS+ + L+P R+ S++ P RSQ SPS+ + RS
Sbjct: 374 PSKSRSRSLSPKRTVSKSTSVSPRRSQSKSPSSSPRWNGGRS 415
>At4g35785.2 68417.m05083 transformer serine/arginine-rich
ribonucleoprotein, putative similar to transformer-SR
ribonucleoprotein [Nicotiana tabacum]
gi|1781299|emb|CAA70700
Length = 141
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -3
Query: 612 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPST 487
S SR + R+ SR P++PSRS R++ + RS++ +P T
Sbjct: 31 SRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSEVENPGT 72
>At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identical
to gi_11935086_gb_AAG41963
Length = 162
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = -3
Query: 732 PTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTP 553
PTP TPVE PV P T A P ++ PS + TPS + P
Sbjct: 51 PTPESTEAPAKTPVEAPVEAPPSPTPASTP---QISPPAPS---PEADTPSAPEIAPSAD 104
Query: 552 SRSTSRTQ*KRPCRSQLTSPSTG 484
+ + T+ K+ + T+P+ G
Sbjct: 105 VPAPALTKHKKKTKKHKTAPAPG 127
>At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identical
to gi_11935086_gb_AAG41963
Length = 185
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = -3
Query: 732 PTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTP 553
PTP TPVE PV P T A P ++ PS + TPS + P
Sbjct: 51 PTPESTEAPAKTPVEAPVEAPPSPTPASTP---QISPPAPS---PEADTPSAPEIAPSAD 104
Query: 552 SRSTSRTQ*KRPCRSQLTSPSTG 484
+ + T+ K+ + T+P+ G
Sbjct: 105 VPAPALTKHKKKTKKHKTAPAPG 127
>At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative strong
similarity to SP|O22315 Pre-mRNA splicing factor SF2
(SR1 protein) {Arabidopsis thaliana}
Length = 300
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -3
Query: 624 AQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSP--STGHTQSTSRSTCL 451
++ PS SRS+ R+ SR + + SRS S ++ K P + SP S + S SRS
Sbjct: 205 SRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSISKSRSPSP 264
Query: 450 CTLRSPYRTQLR 415
+SP R R
Sbjct: 265 DKKKSPPRAMSR 276
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 566 RPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 471
+P+P + PVPS K + VPS ++PSP
Sbjct: 37 KPVPSPKPKPVPSPKPKPVPSPSVPSPSVPSP 68
>At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family
protein
Length = 477
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = -3
Query: 732 PTPGIFPNQCLTPVEKPVPYPGRKTSALXPLKYTLTAQCPSMSRSQFR---TPSRYQCPP 562
PTP +Q P P P PL + + A P S+S T + P
Sbjct: 399 PTPAPHRSQPHPPAPNPAPPRHHAIPVSSPLPHVVFAHIPPPSKSSPESEPTGEKSPSPA 458
Query: 561 LTPSRSTSRTQ*KR 520
TP +S+S TQ R
Sbjct: 459 PTPCKSSSLTQFSR 472
>At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-like
SR protein (SRZ22) identical to RSZp22 protein
[Arabidopsis thaliana] gi|2582645|emb|CAA05352, 9G8-like
SR protein [Arabidopsis thaliana] GI:3435094; contains
Pfam profiles PF00076: RNA recognition motif. (a.k.a.
RRM, RBD, or RNP domain) and PF00098: Zinc knuckle;
identical to cDNA 9G8-like SR protein (SRZ22) GI:3435093
Length = 200
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 606 SRSQFRTPSRYQCPPLTPSRSTS-RTQ*KRPCRSQLTSPSTGHTQSTSRS 460
S+S+ RTP RY+ P RS S R + P R + SP +S SRS
Sbjct: 125 SKSRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRS 174
>At2g16440.1 68415.m01883 DNA replication licensing factor, putative
similar to SP|P49717 DNA replication licensing factor
MCM4 (CDC21 homolog) {Mus musculus}, SP|P29458 Cdc21
protein {Schizosaccharomyces pombe}; contains Pfam
profile PF00493: MCM2/3/5 family
Length = 847
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 678 PYPGRKTSALXPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTS 538
P PG S+ Y+ A R + TP+++ PP PSR S
Sbjct: 15 PSPGENVSSPIENTYSSPAALHRRRRGRSSTPTQFATPPPPPSRLAS 61
>At5g04970.1 68418.m00526 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 624
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 746 PXGQXLPXAYSQTSALPPSRSPSHTPVEKPVP 651
P Q SQ PP++ PSH P + P P
Sbjct: 39 PSSQPPTQPPSQPPTQPPTQPPSHPPTQPPTP 70
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 567 PPLTPSRSTSRTQ*KRPCRSQLTSP 493
PPL PS+S T+ + P SQ +SP
Sbjct: 203 PPLLPSKSIDETRLRSPLMSQASSP 227
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Frame = -1
Query: 728 PXAYSQTSALPPSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGTSARPL-PR 552
P S PP SP +P KP P + P + P P+
Sbjct: 15 PPGPSSKPVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACPPTPPK 74
Query: 551 REAHPVPSRKGRAVPS*HPRRQAIPSP 471
+ P P + + P P+ PSP
Sbjct: 75 PQPKPAPPPEPKPAPPPAPKPVPCPSP 101
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/94 (22%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Frame = -1
Query: 749 GPXGQXL-PXAYSQTSALPPSRSPSHTPVEKPVPXXXXXXXXXXXXXXXREASSVPRQGT 573
GP + + P S + PP P P P P P +
Sbjct: 17 GPSSKPVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACPPTPPK-P 75
Query: 572 SARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 471
+P P E P P + VP P + P+P
Sbjct: 76 QPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTP 109
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 563 PLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 471
P PRR P P R +PS PRR +PSP
Sbjct: 463 PPPRRAGLPSPPPAQR-LPSPPPRRAGLPSP 492
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,455,848
Number of Sequences: 28952
Number of extensions: 223564
Number of successful extensions: 880
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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