Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K23
(859 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 218 4e-57
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 218 4e-57
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 218 4e-57
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 217 8e-57
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 217 8e-57
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 216 2e-56
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 138 3e-33
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 71 1e-12
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 70 2e-12
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 70 2e-12
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 70 2e-12
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 70 2e-12
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 68 7e-12
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 67 1e-11
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 67 1e-11
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 67 1e-11
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 37 0.015
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.18
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.32
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 31 0.98
At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast... 30 2.3
At4g39570.1 68417.m05595 kelch repeat-containing F-box family pr... 29 3.0
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 5.2
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.9
At3g26855.1 68416.m03360 hypothetical protein 28 9.1
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 218 bits (532), Expect = 4e-57
Identities = 119/221 (53%), Positives = 142/221 (64%), Gaps = 4/221 (1%)
Frame = -1
Query: 784 PTYTNLNXSSDRFXLD-HXXLRFDGALNWDLTXVPX*LGALPPVSTSHWSRTRQSX-LPR 611
PTYTNLN + LRFDGALN D+T L P + H+ + + +
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI---HFMLSSYAPVISA 278
Query: 610 RXTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS--YPRM*TRPSLPSKT 437
+ S T+++ P ++A CC + P+ KT
Sbjct: 279 EKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMA-CCLMYRGDVVPKDVNAAVGTIKT 337
Query: 436 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 257
KRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDL
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDL 397
Query: 256 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 134
MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 138 bits (335), Expect = 3e-33
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PRIHF L +YAPV SAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 482 VVPKDVNAAIATIKNQ 435
VVPKDVNAA+ TIK +
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 218 bits (532), Expect = 4e-57
Identities = 119/221 (53%), Positives = 142/221 (64%), Gaps = 4/221 (1%)
Frame = -1
Query: 784 PTYTNLNXSSDRFXLD-HXXLRFDGALNWDLTXVPX*LGALPPVSTSHWSRTRQSX-LPR 611
PTYTNLN + LRFDGALN D+T L P + H+ + + +
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI---HFMLSSYAPVISA 278
Query: 610 RXTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS--YPRM*TRPSLPSKT 437
+ S T+++ P ++A CC + P+ KT
Sbjct: 279 EKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMA-CCLMYRGDVVPKDVNAAVGTIKT 337
Query: 436 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 257
KRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDL
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDL 397
Query: 256 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 134
MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 138 bits (335), Expect = 3e-33
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PRIHF L +YAPV SAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 482 VVPKDVNAAIATIKNQ 435
VVPKDVNAA+ TIK +
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 218 bits (532), Expect = 4e-57
Identities = 119/221 (53%), Positives = 142/221 (64%), Gaps = 4/221 (1%)
Frame = -1
Query: 784 PTYTNLNXSSDRFXLD-HXXLRFDGALNWDLTXVPX*LGALPPVSTSHWSRTRQSX-LPR 611
PTYTNLN + LRFDGALN D+T L P + H+ + + +
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI---HFMLSSYAPVISA 278
Query: 610 RXTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS--YPRM*TRPSLPSKT 437
+ S T+++ P ++A CC + P+ KT
Sbjct: 279 EKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMA-CCLMYRGDVVPKDVNAAVGTIKT 337
Query: 436 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 257
KRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDL
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDL 397
Query: 256 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 134
MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 138 bits (335), Expect = 3e-33
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PRIHF L +YAPV SAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 482 VVPKDVNAAIATIKNQ 435
VVPKDVNAA+ TIK +
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 217 bits (530), Expect = 8e-57
Identities = 119/221 (53%), Positives = 140/221 (63%), Gaps = 4/221 (1%)
Frame = -1
Query: 784 PTYTNLNXSSDRFXLD-HXXLRFDGALNWDLTXVPX*LGALPPVSTSHWSRTRQSX-LPR 611
PTYTNLN + LRFDGA+N D+T L P + H+ + + +
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRI---HFMLSSYAPVISA 278
Query: 610 RXTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS--YPRM*TRPSLPSKT 437
+ S T+A P ++A CC + P+ KT
Sbjct: 279 AKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMA-CCLMYRGDVVPKDVNAAVGTIKT 337
Query: 436 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 257
KRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDL
Sbjct: 338 KRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDL 397
Query: 256 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 134
MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 136 bits (330), Expect = 1e-32
Identities = 60/76 (78%), Positives = 66/76 (86%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PRIHF L +YAPV SA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 482 VVPKDVNAAIATIKNQ 435
VVPKDVNAA+ TIK +
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 217 bits (530), Expect = 8e-57
Identities = 119/221 (53%), Positives = 140/221 (63%), Gaps = 4/221 (1%)
Frame = -1
Query: 784 PTYTNLNXSSDRFXLD-HXXLRFDGALNWDLTXVPX*LGALPPVSTSHWSRTRQSX-LPR 611
PTYTNLN + LRFDGA+N D+T L P + H+ + + +
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRI---HFMLSSYAPVISA 278
Query: 610 RXTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS--YPRM*TRPSLPSKT 437
+ S T+A P ++A CC + P+ KT
Sbjct: 279 AKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMA-CCLMYRGDVVPKDVNAAVGTIKT 337
Query: 436 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 257
KRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDL
Sbjct: 338 KRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDL 397
Query: 256 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 134
MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 136 bits (330), Expect = 1e-32
Identities = 60/76 (78%), Positives = 66/76 (86%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PRIHF L +YAPV SA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 482 VVPKDVNAAIATIKNQ 435
VVPKDVNAA+ TIK +
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 216 bits (527), Expect = 2e-56
Identities = 118/220 (53%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
Frame = -1
Query: 784 PTYTNLNXS-SDRFXLDHXXLRFDGALNWDLTXVPX*LGALPPVSTSHWSRTRQSXL--P 614
PTY+NLN S LRFDGA+N D+T L P + H+ + + +
Sbjct: 222 PTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRI---HFMLSSYAPVISS 278
Query: 613 RRXTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS--YPRM*TRPSLPSK 440
+ F P T P P ++A CC + P+ K
Sbjct: 279 AKAYHEQFSVPEITTSVFEPSNMMAKCDP-RHGKYMA-CCLMYRGDVVPKDVNTAVAAIK 336
Query: 439 TKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFD 260
KRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFD
Sbjct: 337 AKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFD 396
Query: 259 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 140
LMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 397 LMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 138 bits (335), Expect = 3e-33
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PRIHF L +YAPV SAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 482 VVPKDVNAAIATIKNQ 435
VVPKDVNAA+ TIK +
Sbjct: 323 VVPKDVNAAVGTIKTK 338
Score = 116 bits (280), Expect = 2e-26
Identities = 73/169 (43%), Positives = 92/169 (54%), Gaps = 4/169 (2%)
Frame = -1
Query: 784 PTYTNLNXSSDRFXLD-HXXLRFDGALNWDLTXVPX*LGALPPVSTSHWSRTRQSX-LPR 611
PTYTNLN + LRFDGALN D+T L P + H+ + + +
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI---HFMLSSYAPVISA 278
Query: 610 RXTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS--YPRM*TRPSLPSKT 437
+ S T+++ P ++A CC + P+ KT
Sbjct: 279 EKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMA-CCLMYRGDVVPKDVNAAVGTIKT 337
Query: 436 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 290
KRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = -1
Query: 442 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 263
+ K + FV+W P K + PPT ++ A + N+T+I E + R+ +F
Sbjct: 335 QNKNSSYFVEWIPNNVKSSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQF 386
Query: 262 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 387 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 321
Query: 482 VVPKDVNAAIATI--KNQAYY 426
+ K+V+ I + KN +Y+
Sbjct: 322 MSTKEVDEQILNVQNKNSSYF 342
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = -1
Query: 442 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 263
+ K + FV+W P K + PPT ++ A + N+T+I E + R+ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 262 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Query: 482 VVPKDVNAAIATI--KNQAYY 426
+ K+V+ + + KN +Y+
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYF 341
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = -1
Query: 442 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 263
+ K + FV+W P K + PPT ++ A + N+T+I E + R+ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 262 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Query: 482 VVPKDVNAAIATI--KNQAYY 426
+ K+V+ + + KN +Y+
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYF 341
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = -1
Query: 442 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 263
+ K + FV+W P K + PPT ++ A + N+T+I E + R+ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 262 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 482 VVPKDVNAAIATI--KNQAYY 426
+ K+V+ + + KN +Y+
Sbjct: 321 MSTKEVDEQMINVQNKNSSYF 341
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = -1
Query: 442 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 263
+ K + FV+W P K + PPT ++ A + N+T+I E + R+ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 262 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 482 VVPKDVNAAIATI--KNQAYY 426
+ K+V+ + + KN +Y+
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYF 341
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 68.1 bits (159), Expect = 7e-12
Identities = 32/99 (32%), Positives = 55/99 (55%)
Frame = -1
Query: 442 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 263
+ K + FV+W P K + PP ++ A + N+T+I E + R+ +F
Sbjct: 335 QNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMAATFVGNSTSIQEMFRRVSEQF 386
Query: 262 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 387 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 425
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQ 321
Query: 482 VVPKDVNAAIATI--KNQAYY 426
+ K+V+ I I KN +Y+
Sbjct: 322 MSTKEVDEQILNIQNKNSSYF 342
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/99 (32%), Positives = 56/99 (56%)
Frame = -1
Query: 442 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 263
+ K + FV+W P K + + P G ++ A + N+T+I E + R+ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVC----DIAPKG----LKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 262 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGK 320
Query: 482 VVPKDVNAAIATI--KNQAYY 426
+ K+V+ + I KN +Y+
Sbjct: 321 LSTKEVDEQMMNIQNKNSSYF 341
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/99 (32%), Positives = 55/99 (55%)
Frame = -1
Query: 442 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 263
+ K + FV+W P K + + P G + A + N+T+I E + R+ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVC----DIAPRG----LSMASTFIGNSTSIQEMFRRVSEQF 385
Query: 262 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Query: 482 VVPKDVNAAIATI--KNQAYY 426
+ K+V+ + + KN +Y+
Sbjct: 321 MSTKEVDEQMINVQNKNSSYF 341
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/99 (32%), Positives = 56/99 (56%)
Frame = -1
Query: 442 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 263
+ K + FV+W P K + + P G ++ A + N+T+I E + R+ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVC----DIAPTG----LKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 262 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = -3
Query: 662 PRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 483
PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGK 320
Query: 482 VVPKDVNAAIATI--KNQAYY 426
+ K+V+ + + KN +Y+
Sbjct: 321 MSTKEVDEQMMNVQNKNSSYF 341
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = -1
Query: 442 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 263
+ ++ + F+DW P +V ++ + P V ++ + ML++ T+I ++R ++
Sbjct: 343 RERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL-----MLASHTSIRHLFSRCLSQY 397
Query: 262 DLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 149
D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 398 DKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
Score = 31.1 bits (67), Expect = 0.98
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = -3
Query: 665 TPRIHFPLVTYAPVXSAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMAC 504
TPR HF + Y P+ +A + +V ++ + N MV R+ KY++
Sbjct: 263 TPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISI 322
Query: 503 CMLYRGDVVPKDVNAAIATIKNQ 435
+ +G+V P V+ ++ I+ +
Sbjct: 323 LNIIQGEVDPTQVHESLQRIRER 345
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 456 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVXLLGRXD 626
GRV I Y D + + H H L TG+ HH+ G++ D D K+ + L D
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK----DASDKKILVDMLFWAFD 112
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 279 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 172
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 31.1 bits (67), Expect = 0.98
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = -3
Query: 665 TPRIHFPLVTYAPVXSAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMAC 504
TPR HF + Y P+ +A + +V ++ + N MV R+ KY++
Sbjct: 263 TPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISI 322
Query: 503 CMLYRGDVVPKDVNAAIATIKNQ 435
+ +G+V P V+ ++ I+ +
Sbjct: 323 LNIIQGEVDPTQVHESLQRIRER 345
>At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast
(ATPC2) identical to SP|Q01909 ATP synthase gamma chain
2, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase;
similar to ATP synthase gamma-subunit GI:21241 from
[Spinacia oleracea]
Length = 386
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 455 IATIKNQAYYPIRRLVSNRFQGRYQLPA 372
IAT+K YYP + L NR R LP+
Sbjct: 29 IATLKPVRYYPFQSLTPNRISSRSPLPS 56
>At4g39570.1 68417.m05595 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 395
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 479 VPKDVNAAIATIKNQAYYPIRRLVSNRFQGRYQLPATHRGARRRLGQGSTC 327
+P D+ +I ++ YYPI LVS F+ + P + R LG+ +C
Sbjct: 35 LPDDLLVSIFARVSRLYYPILSLVSKSFRSLLRSPELYE-TRSLLGRTESC 84
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 151 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 267
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 64 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 225
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 226 TSA 234
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 258 SCTPSVLSCTGTSVRVWRRESSPK 187
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,081,784
Number of Sequences: 28952
Number of extensions: 368948
Number of successful extensions: 1234
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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