Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K22
(846 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 143 3e-35
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 140 2e-34
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 107 2e-24
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 58 2e-09
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 54 2e-08
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 36 0.010
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 33 0.039
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.089
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 31 0.27
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 31 0.27
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.36
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.47
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 0.83
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.83
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.83
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 1.4
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 28 1.4
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.9
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 28 1.9
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 28 1.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.5
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.3
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.4
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 4.4
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.4
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 4.4
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.8
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 26 5.8
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 5.8
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 7.7
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 7.7
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.7
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 143 bits (346), Expect = 3e-35
Identities = 66/114 (57%), Positives = 87/114 (76%)
Frame = -3
Query: 571 KENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 392
K KITITNDK RLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDP 554
Query: 391 KLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKM 230
LK+K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+
Sbjct: 555 NLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKI 608
Score = 72.9 bits (171), Expect = 5e-14
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 713 TKDNXLLGKFELTGXPPAPRGVXQXGVTXDIDANGIXNVSAIEKSTXQGEQ 561
TKD LLGKFEL+G PPAPRGV Q VT D+DANGI NVSA+EK T + ++
Sbjct: 448 TKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQK 498
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 140 bits (340), Expect = 2e-34
Identities = 65/114 (57%), Positives = 87/114 (76%)
Frame = -3
Query: 571 KENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 392
K KITITNDK RLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDP 554
Query: 391 KLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKM 230
LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+
Sbjct: 555 NLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKI 608
Score = 72.9 bits (171), Expect = 5e-14
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 713 TKDNXLLGKFELTGXPPAPRGVXQXGVTXDIDANGIXNVSAIEKSTXQGEQ 561
TKD LLGKFEL+G PPAPRGV Q VT D+DANGI NVSA+EK T + ++
Sbjct: 448 TKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQK 498
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 107 bits (257), Expect = 2e-24
Identities = 52/123 (42%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Frame = -3
Query: 592 LSRSPPXKENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSM 413
+ +S K K+ I NDK RLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+
Sbjct: 518 VDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSL 577
Query: 412 KSTM-EDEKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGIYNPII 239
K +DE+L K+ DKQ +LD D +WL+ + A KEE+E ++++L+ + +PI
Sbjct: 578 KGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPIT 637
Query: 238 TKM 230
K+
Sbjct: 638 QKL 640
Score = 69.3 bits (162), Expect = 6e-13
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = -2
Query: 716 MTKDNXLLGKFELTGXPPAPRGVXQXGVTXDIDANGIXNVSAIEKS 579
+TKDN LLGKF+L G PPAPRGV Q VT ++DANG+ VSA++KS
Sbjct: 476 LTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKS 521
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 58.0 bits (134), Expect = 2e-09
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = -2
Query: 716 MTKDNXLLGKFELTGXPPAPRGVXQXGVTXDIDANGIXNVSAIEKST 576
+ +DN L+G F+LTG PAP+G Q V+ D+DA+GI NVSA +K+T
Sbjct: 490 LVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKAT 536
Score = 48.0 bits (109), Expect = 2e-06
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = -3
Query: 571 KENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME-- 398
K++ IT+ L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++
Sbjct: 538 KDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIH 596
Query: 397 DEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 260
+KL ++ + + I D K ++ E+ + K E++
Sbjct: 597 KDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQ 642
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 54.4 bits (125), Expect = 2e-08
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = -2
Query: 707 DNXLLGKFELTGXPPAPRGVXQXGVTXDIDANGIXNVSAIEKST 576
+N LG+F+LTG PP PRG + T ++DANGI V+A+EK+T
Sbjct: 455 ENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTT 498
Score = 51.6 bits (118), Expect = 1e-07
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = -3
Query: 559 ITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 380
I ITN LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + +
Sbjct: 504 IEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMM 563
Query: 379 KISDSDKQTI---LDKCNDTIKWLDSN 308
K+ DK I L +C ++ D+N
Sbjct: 564 KLKRGDKSKIEAQLAECMSQLELEDTN 590
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 35.5 bits (78), Expect = 0.010
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = -3
Query: 559 ITITNDKXRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EK 389
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAP 600
Query: 388 LKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGIYNPI 242
+ S + +L K D WL + + K Y K ++L + PI
Sbjct: 601 FTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 33.5 bits (73), Expect = 0.039
Identities = 31/132 (23%), Positives = 53/132 (40%)
Frame = -3
Query: 586 RSPPXKENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 407
+ P K T+ + + E+ + E EK + +A+ A +
Sbjct: 209 QKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSA 268
Query: 406 TMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKM* 227
+E EK KEK D D++ DT+ D NQ+ D+ E K+ + E + P + +
Sbjct: 269 KLEKEKAKEKQKDKDQE------QDTVS--DKNQI-DEIEKGQKEVDEEPVSEPTTSPIL 319
Query: 226 PGCRRSPRRYAG 191
P + P R G
Sbjct: 320 PPKNQEPIRMGG 331
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.089
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -3
Query: 523 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 344
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 343 K 341
K
Sbjct: 79 K 79
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 30.7 bits (66), Expect = 0.27
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = -3
Query: 586 RSPPXKENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 407
+S K N D+ + +EE E ++EK ++ K + KNA ++ M
Sbjct: 80 KSKKAKANAFEAFADEQSVEEEEEE----DSEKPVRKNKKSSKKASPKNAFDALADDMDD 135
Query: 406 TMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEYEHKQKE 266
DE+ E S K+ K +D + LD + E+ + K+K+
Sbjct: 136 LSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.7 bits (66), Expect = 0.27
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -3
Query: 541 KXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 365
K R +E I + EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 364 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 266
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.36
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -3
Query: 529 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 350
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 349 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 260
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.9 bits (64), Expect = 0.47
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Frame = -3
Query: 568 ENKITITNDKXRLSKEEIERMVNEAEK------YRN-------EDDKQKETIQAKNALES 428
EN+ +K R+ E+ ++++ +K YRN DDKQ + KN+LE+
Sbjct: 1237 ENEERFEKEKRRIMSEDRDKLIRGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLET 1296
Query: 427 YCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 323
M+ + E K D ++ LDK D K
Sbjct: 1297 IDEKMEDASKIEG-DAKTGDDNEMEDLDKMEDLEK 1330
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 29.1 bits (62), Expect = 0.83
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = -3
Query: 571 KENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 392
K+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 530 KKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNR 580
Query: 391 KLKEKISD 368
KLK+K S+
Sbjct: 581 KLKKKASN 588
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.1 bits (62), Expect = 0.83
Identities = 22/95 (23%), Positives = 42/95 (44%)
Frame = -3
Query: 553 ITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 374
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 373 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 269
D++++ D +K+ L + EY +QK
Sbjct: 491 EDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQK 524
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 29.1 bits (62), Expect = 0.83
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -3
Query: 385 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKEL-EGIYNPIITKM*PG--C 218
+EKI +++TI D K + + ++ EEY KQKEL E + P ++ P
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQEELEFPDEVELQPNELA 486
Query: 217 RRSPRRYAGL 188
R ++Y GL
Sbjct: 487 RERFKKYRGL 496
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.3 bits (60), Expect = 1.4
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = -3
Query: 532 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE-SYCFSMKSTMEDEKLKEKISDSDKQ 356
L+ + ++ + E E K+ ET++ KN+ + + ++ E LK +K
Sbjct: 485 LASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKD 544
Query: 355 TILDKCNDTIKWLDSN--QLADK-EEYEHKQKELEGIYNPII 239
++++ IK + N +L +EY +K K+ E YN ++
Sbjct: 545 RLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVM 586
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -3
Query: 526 KEEIERMVNEAEKYRNEDDKQ-KETIQAKNAL 434
KEE+E+ + +K RNE+ K+ KET+ NAL
Sbjct: 684 KEEVEK--KDGDKERNEEKKEEKETLPVLNAL 713
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -3
Query: 523 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 347
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 346 DKCNDTIKWLDSNQLADKEEYEHKQK 269
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = -3
Query: 577 PXKENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 398
P + I +T + R S E V + E ++D + +++NA + S +
Sbjct: 234 PDLSSLIRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLS 291
Query: 397 DEKLKEKISDSDKQTILDKCNDTIK 323
+ +KEK S +K DK + K
Sbjct: 292 ESSMKEKQSKIEKYMKSDKSSKNFK 316
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 568 ENKITITNDKXRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNAL------ESYCFSMK 410
EN++ I N L K +++ R ++ +N+++ +++ A + L ++ +
Sbjct: 800 ENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFR 859
Query: 409 STMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 290
+DEKLK+ D ++ N+ + D ++D E
Sbjct: 860 KFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.5
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = -3
Query: 535 RLSKEEIERMVNEAEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 359
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 358 QTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIY 251
+T + + K L +N+L+ E + E E Y
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKENDY 1044
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -3
Query: 547 NDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 371
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 370 DSDKQT 353
+D+ T
Sbjct: 695 -TDRLT 699
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 508 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 404
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -3
Query: 544 DKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 365
D+ +EIE M + + + D + + N + CFS +ED K KE +SD
Sbjct: 208 DRTMEQLKEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDE 264
Query: 364 DKQT 353
K +
Sbjct: 265 MKSS 268
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -3
Query: 505 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 326
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 325 KWLDSNQLADKEEYEHKQKELEGIYNPI 242
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -3
Query: 478 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 317
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 568 ENKITITNDKXRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 398
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 5.8
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -3
Query: 526 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 374
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 373 SDSDKQTILDKCND 332
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 541 KXRLSKEEIERMVNEAEKYRNEDD 470
K LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3
Query: 529 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 407
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 7.7
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 475 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 299
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 298 DK 293
DK
Sbjct: 238 DK 239
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.8 bits (54), Expect = 7.7
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -3
Query: 559 ITITND-KXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 383
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 382 EKISDSDKQTILDKC 338
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -3
Query: 526 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 347
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 346 D 344
D
Sbjct: 451 D 451
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,420,969
Number of Sequences: 5004
Number of extensions: 39818
Number of successful extensions: 204
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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