Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K21
(803 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 69 6e-14
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 49 4e-08
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 25 0.93
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 23 2.2
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 22 5.0
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 68.5 bits (160), Expect = 6e-14
Identities = 43/119 (36%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Frame = -3
Query: 633 EGYMGQHCRTAL--C-YPQCMNGGNCT---APGLCSCPQGYQGRHCEGGI--C-AQKCMN 481
+GY G +C+T + C C NGG C C CP+G+QG++CE + C C N
Sbjct: 174 DGYSGSYCQTEINECDSAPCQNGGTCLDLIGSYSCKCPKGFQGQNCELNVDDCKPNPCQN 233
Query: 480 GGKC---IQKDTCFCXKGHYGRRCEFS--KC-VIPCLNGGRC---VGVNKCRCPAGLGG 331
GG C + +C C G G CE + C C N G C VG +C+CP G G
Sbjct: 234 GGTCHDLVNSFSCSCPSGTLGYICEINVDDCRPGACHNNGTCLDKVGGFECKCPPGFVG 292
Score = 66.1 bits (154), Expect = 3e-13
Identities = 45/121 (37%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Frame = -3
Query: 630 GYMGQHCRTAL--CYPQ-CMNGGNCTAPGL-----CSCPQGYQGRHCEGGI--CAQK-CM 484
G++G C + C C N G L C+C G+ GRHCE + CA C
Sbjct: 289 GFVGPRCEGDINECLSNPCSNAGTLDCVQLVNDYHCNCKLGFMGRHCESKVNFCATSPCQ 348
Query: 483 NGGKCIQKDT---CFCXKGHYGRRCEFS--KC-VIPCLNGGRC----VGVNKCRCPAGLG 334
NGG C C C +G YG+ CEFS C PC NGG C G C CP+G
Sbjct: 349 NGGVCTTIHAGHKCTCPEGFYGKNCEFSGYDCDSNPCQNGGVCRISDGGGYICDCPSGTN 408
Query: 333 G 331
G
Sbjct: 409 G 409
Score = 60.9 bits (141), Expect = 1e-11
Identities = 46/120 (38%), Positives = 54/120 (45%), Gaps = 20/120 (16%)
Frame = -3
Query: 630 GYMGQHCRTAL--CYP-QCMNGGNCT--APGL-CSCPQGYQGRHCEGGI--C-AQKCMNG 478
G +G C + C P C N G C G C CP G+ G CEG I C + C N
Sbjct: 251 GTLGYICEINVDDCRPGACHNNGTCLDKVGGFECKCPPGFVGPRCEGDINECLSNPCSNA 310
Query: 477 G--KCIQ--KD-TCFCXKGHYGRRCE--FSKCVI-PCLNGGRCVGV---NKCRCPAGLGG 331
G C+Q D C C G GR CE + C PC NGG C + +KC CP G G
Sbjct: 311 GTLDCVQLVNDYHCNCKLGFMGRHCESKVNFCATSPCQNGGVCTTIHAGHKCTCPEGFYG 370
Score = 58.4 bits (135), Expect = 6e-11
Identities = 38/98 (38%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Frame = -3
Query: 579 NGGNCTAPG---LCSCPQGYQGRHCEGGI--C-AQKCMNGGKC---IQKDTCFCXKGHYG 427
N G C G C C GY G +C+ I C + C NGG C I +C C KG G
Sbjct: 157 NNGTCEDIGNSHRCHCSDGYSGSYCQTEINECDSAPCQNGGTCLDLIGSYSCKCPKGFQG 216
Query: 426 RRCEFS--KC-VIPCLNGGRC---VGVNKCRCPAGLGG 331
+ CE + C PC NGG C V C CP+G G
Sbjct: 217 QNCELNVDDCKPNPCQNGGTCHDLVNSFSCSCPSGTLG 254
Score = 54.4 bits (125), Expect = 1e-09
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 16/115 (13%)
Frame = -3
Query: 630 GYMGQHCRTA---LCYPQCMNGGNCTA---PGLCSCPQGYQGRHCEG--GIC-AQKCMNG 478
G+ G +C+T CMNGG C +C+C G+ G +C+ +C + C+NG
Sbjct: 14 GFSGINCQTNDEDCTETSCMNGGTCIDGINSYICTCKPGFTGSNCQNRINLCDSSPCLNG 73
Query: 477 GKCIQKD---TCFCXKGHYGRRC-EF-SKC-VIPCLNGGRCV-GVNKCRCPAGLG 334
C TC C G+ G+ C E+ C PC N CV N+ +C G+G
Sbjct: 74 ATCQDHTTHYTCHCPYGYTGKDCGEYVDWCSTNPCENQATCVQNKNQYQCLCGVG 128
Score = 51.6 bits (118), Expect = 7e-09
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Frame = -3
Query: 549 CSCPQGYQGRHCEGG--ICAQ-KCMNGGKC---IQKDTCFCXKGHYGRRCE--FSKC-VI 397
C+CP G+ G +C+ C + CMNGG C I C C G G C+ + C
Sbjct: 9 CTCPLGFSGINCQTNDEDCTETSCMNGGTCIDGINSYICTCKPGFTGSNCQNRINLCDSS 68
Query: 396 PCLNGGRCVGVN---KCRCPAGLGG 331
PCLNG C C CP G G
Sbjct: 69 PCLNGATCQDHTTHYTCHCPYGYTG 93
Score = 48.4 bits (110), Expect = 7e-08
Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 27/129 (20%)
Frame = -3
Query: 630 GYMGQHC--RTALCYPQ-CMNGGNC---TAPGLCSCPQGYQGRHCEGGI--CA-QKCMNG 478
G+ G +C R LC C+NG C T C CP GY G+ C + C+ C N
Sbjct: 52 GFTGSNCQNRINLCDSSPCLNGATCQDHTTHYTCHCPYGYTGKDCGEYVDWCSTNPCENQ 111
Query: 477 GKCIQKDT---CFCXKGHYGRRC--EFSKC-------VIP---CLNGGRCVGV---NKCR 352
C+Q C C G G+ C E C V+P N G C + ++C
Sbjct: 112 ATCVQNKNQYQCLCGVGWTGKVCDVEMVSCKDAALRKVVPLKKLCNNGTCEDIGNSHRCH 171
Query: 351 CPAGLGGDH 325
C G G +
Sbjct: 172 CSDGYSGSY 180
Score = 41.9 bits (94), Expect = 6e-06
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 27/129 (20%)
Frame = -3
Query: 630 GYMGQHCRTAL--CYPQ-CMNGGNCTAPG---LCSCPQGYQGRHCEGGICA--------- 496
GY G+ C + C C N C C C G+ G+ C+ + +
Sbjct: 90 GYTGKDCGEYVDWCSTNPCENQATCVQNKNQYQCLCGVGWTGKVCDVEMVSCKDAALRKV 149
Query: 495 ---QKCMNGGKCIQ---KDTCFCXKGHYGRRC--EFSKC-VIPCLNGGRC---VGVNKCR 352
+K N G C C C G+ G C E ++C PC NGG C +G C+
Sbjct: 150 VPLKKLCNNGTCEDIGNSHRCHCSDGYSGSYCQTEINECDSAPCQNGGTCLDLIGSYSCK 209
Query: 351 CPAGLGGDH 325
CP G G +
Sbjct: 210 CPKGFQGQN 218
Score = 36.3 bits (80), Expect = 3e-04
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 15/88 (17%)
Frame = -3
Query: 633 EGYMGQHCRTAL--CYPQ-CMNGGNCTAPG----LCSCPQGYQGRHCEGGICAQKCMNGG 475
EG+ G++C + C C NGG C +C CP G G +CE + N
Sbjct: 366 EGFYGKNCEFSGYDCDSNPCQNGGVCRISDGGGYICDCPSGTNGTNCEIDTINECDSNPC 425
Query: 474 K-----CIQK---DTCFCXKGHYGRRCE 415
K C K C+C H G+ CE
Sbjct: 426 KHLDAICQDKLGDYACYCPPKHTGKNCE 453
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 49.2 bits (112), Expect = 4e-08
Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Frame = -3
Query: 585 CMNGGNCT-APGL---CSCPQGYQGRHCEGGI--C-AQKCMNGGKCIQKDT---CFCXKG 436
C G+C PG+ C C G+ G++C I C C NGG C+ K C C +G
Sbjct: 38 CGEHGHCVNLPGVGHRCQCQPGFTGKYCHENINDCKVNPCENGGTCVDKINAFQCICKEG 97
Query: 435 HYGRRCEFS--KC-VIPCLNGGRCV---GVNKCRCPAGLGG 331
G C + C PC N G CV +C C G G
Sbjct: 98 WEGALCNINTDDCSPNPCRNNGSCVDRIADFECNCKNGWKG 138
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 24.6 bits (51), Expect = 0.93
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -3
Query: 456 TCFCXKGHYGRRCEFSKCVIPCLNGGRCVGVNK 358
TC K +GR + C N G CV +NK
Sbjct: 21 TCEGCKSFFGRTYNNISSISECKNNGECV-INK 52
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 23.4 bits (48), Expect = 2.2
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPPSPA-GHRHLFTPTQRPPFKHGITHFENSHL 424
P+R +P+ + + S +PP+P+ TP++ K T F ++ L
Sbjct: 80 PKRSSPILAEKVSVSPTTPPTPSPPPEERLTPSKDASSKRIXTAFTSTQL 129
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 594 YPQCMNGGNCTAPGLCSCPQGYQGRHCEGG 505
Y Q + N G SC Q YQG++C GG
Sbjct: 237 YNQAYSNYNNYQEGF-SC-QYYQGKNCVGG 264
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,562
Number of Sequences: 336
Number of extensions: 4104
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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