Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K21
(803 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42620.1 68418.m05188 expressed protein 59 3e-09
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 34 0.13
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 31 0.90
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 31 1.2
At3g22380.1 68416.m02825 expressed protein 30 2.1
At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family... 29 2.7
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 29 3.6
At3g60300.1 68416.m06740 RWD domain-containing protein contains ... 29 3.6
At1g54490.1 68414.m06215 5'-3' exoribonuclease (XRN4) identical ... 29 3.6
At1g53130.1 68414.m06016 stigma-specific Stig1 family protein si... 29 3.6
At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK... 29 4.8
At2g35230.2 68415.m04322 VQ motif-containing protein contains PF... 29 4.8
At2g35230.1 68415.m04321 VQ motif-containing protein contains PF... 29 4.8
At4g00200.1 68417.m00021 DNA-binding family protein contains a A... 28 6.3
At1g54030.1 68414.m06156 GDSL-motif lipase, putative similar to ... 28 6.3
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 28 6.3
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 28 6.3
At4g20110.1 68417.m02943 vacuolar sorting receptor, putative sim... 28 8.3
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 8.3
At2g15180.1 68415.m01731 zinc knuckle (CCHC-type) family protein... 28 8.3
At1g64140.1 68414.m07266 expressed protein similar to putative d... 28 8.3
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/85 (36%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = -3
Query: 597 CYPQCMNGGNCTAPGLCSCPQGYQGRHCEGGICAQKCMNGGKCIQKDTCFCXKGHYGRRC 418
C C G+C G C C GY G C C C GKC + C C G G C
Sbjct: 603 CPNSCNFNGDCV-DGKCRCLLGYHGHDCRNRSCPNNCNGHGKCTTQGVCICENGFTGIDC 661
Query: 417 EFSKCVIPC-LNGGRC-VGVNKCRC 349
+ C C L+GG C GV + RC
Sbjct: 662 STAICDEQCSLHGGVCDNGVCEFRC 686
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = -3
Query: 630 GYMGQHCRTALCYPQCMNGGNCTAPGLCSCPQGYQGRHCEGGICAQKC-MNGGKCIQKDT 454
GY G CR C C G CT G+C C G+ G C IC ++C ++GG C
Sbjct: 623 GYHGHDCRNRSCPNNCNGHGKCTTQGVCICENGFTGIDCSTAICDEQCSLHGGVCDNGVC 682
Query: 453 CFCXKGHYGRRCEFSKCVIPCL 388
F + G C+ S ++ L
Sbjct: 683 EFRCSDYAGYTCQNSSKLVTSL 704
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/59 (30%), Positives = 22/59 (37%)
Frame = -3
Query: 507 GICAQKCMNGGKCIQKDTCFCXKGHYGRRCEFSKCVIPCLNGGRCVGVNKCRCPAGLGG 331
G C C G C+ C C G++G C C C G+C C C G G
Sbjct: 601 GQCPNSCNFNGDCVD-GKCRCLLGYHGHDCRNRSCPNNCNGHGKCTTQGVCICENGFTG 658
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 33.9 bits (74), Expect = 0.13
Identities = 32/94 (34%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Frame = -3
Query: 615 HCRTALCYPQCMNG--GNCTAPGLCSCPQG---YQGRHCEGGICAQKCMNGGKCIQKDTC 451
+C +C C G G C G SCP G YQG C+ + A C GG C + C
Sbjct: 302 NCGKHVCERGCHAGECGLCPYQGKRSCPCGKRFYQGLSCD--VVAPLC--GGTCDKVLGC 357
Query: 450 FCXKGHYGRRCEFSKCVIPCLNGGRCVGVNKCRC 349
G++ RC PCL R V CRC
Sbjct: 358 ----GYH--RCPERCHRGPCLETCRIVVTKSCRC 385
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +2
Query: 218 SEEPGGRWQARPRQPGSRHR-PRRHAPLH-SPRRPTSQWSPPSPAGHRHLFTPTQR 379
S P R + P P R R P A H SP P Q PSP RH P R
Sbjct: 312 SPSPPARRRRSPSPPARRRRSPSPPARRHRSPTPPARQRRSPSPPARRHRSPPPAR 367
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 248 RPRQPGSRHRPRRHAPLHSPRRPTSQWSPPSPAGHRHLFTPTQRPP 385
R R+ S R R +P+ RRPT + SPA R +P+ PP
Sbjct: 273 RRRRIHSPFRSRSRSPIRRHRRPTHEGRRQSPAPSRRRRSPS--PP 316
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 8/67 (11%)
Frame = +2
Query: 206 SPDSSEEPGGRWQARPRQPGSRHRPRRHAPL--------HSPRRPTSQWSPPSPAGHRHL 361
+P S+ P R P QP P H P HSP P+ PSP H
Sbjct: 165 APSKSQPP--RSSVSPAQPPKSSSPISHTPALSPSHATSHSPATPSPSPKSPSPVSHSPS 222
Query: 362 FTPTQRP 382
+P P
Sbjct: 223 HSPAHTP 229
>At3g22380.1 68416.m02825 expressed protein
Length = 1550
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/71 (23%), Positives = 27/71 (38%)
Frame = +2
Query: 185 YYRGFLYSPDSSEEPGGRWQARPRQPGSRHRPRRHAPLHSPRRPTSQWSPPSPAGHRHLF 364
++ G YS + P +P++ + + H+P S S A +HL
Sbjct: 858 FFNGSFYSSQMIQPP----HHQPQKQHQQQLTGQMLQSHAPNNQNGSASTGSSAAQKHLQ 913
Query: 365 TPTQRPPFKHG 397
RPP HG
Sbjct: 914 NQQLRPPINHG 924
>At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 175
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 260 PGSRHRPRRHAPLHSPRRPTSQWSPPSP 343
P + R +R++P +P P+ Q+SPP P
Sbjct: 50 PSCKPRLQRYSPYGNPPPPSPQYSPPPP 77
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +2
Query: 212 DSSEEPGGRWQARPRQPGSRHRPRRHAPLHSPRRPTSQWSPP 337
DSS+ P A QP RH P P PR P S PP
Sbjct: 113 DSSQIPPPPSTAVEYQPHHRHHPPPPPPPPPPRSPNSASPPP 154
>At3g60300.1 68416.m06740 RWD domain-containing protein contains
weak similarity to RING finger protein 25 (RING finger
protein AO7) (Swiss-Prot:Q9QZR0) [Mus musculus]
Length = 366
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 206 SPDSSEEPGGRWQARPRQPGSRHRPRRHAP-LHSPRRPTSQW 328
S ++ GRW+ R R G P PR+PT QW
Sbjct: 316 SSSTNRRGRGRWRGRGRSRGRGPTVNERKPNSQDPRKPTRQW 357
>At1g54490.1 68414.m06215 5'-3' exoribonuclease (XRN4) identical to
XRN4 [Arabidopsis thaliana] GI:11875626; contains Pfam
domain PF03159: Putative 5'-3' exonuclease domain
Length = 947
Score = 29.1 bits (62), Expect = 3.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 482 FIHFCAHIPPSQCRPW 529
+ HF H+PP +C PW
Sbjct: 628 YYHFYQHMPPHECLPW 643
>At1g53130.1 68414.m06016 stigma-specific Stig1 family protein
similar to stigma-specific protein STIG1 [Nicotiana
tabacum] GI:496647; contains Pfam profile PF04885:
Stigma-specific protein, Stig1
Length = 168
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Frame = -3
Query: 618 QHCRTAL--------CYPQCMNGGNCTAPGLCSCPQGYQGRHCEGGICAQKCMNGGKC 469
+HCR L C +C G C G+C+ + HC G C +KC +G KC
Sbjct: 107 KHCRNVLGDRNNCGRCGHKCGFGQRCCG-GVCTYVN-FNPNHC--GKCTRKCASGVKC 160
>At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK,
putative similar to cyclin dependent kinase C
[Lycopersicon esculentum] gi|15215944|emb|CAC51391
Length = 505
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = +2
Query: 254 RQPGSRHRPRRHAPLH---SPRRPTSQWSPPSPAGHRHLFTPTQRPP 385
R P +H + HA H P PT+ P PAG H F R P
Sbjct: 376 RLPPLQHGGQSHAAPHWPAGPNHPTNNAPPQVPAGPSHNFYGKPRGP 422
>At2g35230.2 68415.m04322 VQ motif-containing protein contains
PF05678: VQ motif
Length = 295
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 314 PTSQWSPPSPAGHRHLFTPTQRPP 385
PTSQ+ PSP G+ ++F+P P
Sbjct: 206 PTSQFLQPSPTGYPNMFSPRSPYP 229
>At2g35230.1 68415.m04321 VQ motif-containing protein contains
PF05678: VQ motif
Length = 402
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 314 PTSQWSPPSPAGHRHLFTPTQRPP 385
PTSQ+ PSP G+ ++F+P P
Sbjct: 313 PTSQFLQPSPTGYPNMFSPRSPYP 336
>At4g00200.1 68417.m00021 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 345
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 275 RPRRHAPLHSPRRPTSQWSPPS-PAGHRHLFTPT----QRPPFKHGITHFENSHLRP 430
+PR+ H+P S PPS P +F+PT ++PP GI+ + N P
Sbjct: 275 KPRKQRVEHAPAAVMSVPPPPSPPPPAASVFSPTNPDREQPPSSFGISSWTNGQDMP 331
>At1g54030.1 68414.m06156 GDSL-motif lipase, putative similar to
myrosinase-associated proteins GI:1769968, GI:1769970,
GI:1216391, GI:1216389 from [Brassica napus]; contains
Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase
Length = 417
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -3
Query: 603 ALCYPQCMNGGNCTAPGLCSCPQGY---QGRH 517
A C +NG NC+A +C+ P+ Y G+H
Sbjct: 300 ACCGTGSINGSNCSAKNVCAKPEEYIFFDGKH 331
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 60 PKKHYEYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 103
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 88 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 131
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 116 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 159
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 144 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 187
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 172 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 215
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 200 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 243
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 228 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 271
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 256 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 299
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 284 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 327
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 312 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 355
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 278 PRRHAPLHSPRRPTSQWSPP-----SPAGHRHLFTPTQRPPFKH 394
P++H SP P +SPP P +H + PP KH
Sbjct: 340 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKH 383
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 251 PRQPGSRHRPRRHAPLHSPRRPTS--QWSPPSPAGHR 355
PR+P R PRR +PL PRR S + SP SP R
Sbjct: 212 PRRPRERLSPRRRSPL--PRRGLSPRRRSPDSPHRRR 246
>At4g20110.1 68417.m02943 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222; identical to vacuolar sorting
receptor-like protein (GI:2827665) [Arabidopsis
thaliana]
Length = 625
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -3
Query: 549 CSCPQGYQGRHCEGGIC--AQKCMNGGKCIQKDTCFCXKGHYGRRCEFS 409
C CP+G+QG +G C +C C Q C C G +C S
Sbjct: 499 CKCPEGFQG---DGLTCEDINECKERSVC-QCSGCRCKNSWGGYKCSCS 543
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 248 RPRQPGSRHRPRRHAPLHSPRRPTSQWSPPSPAGHRHLFTPTQRPP 385
R P H P +P+HSP P +SPP P +++P PP
Sbjct: 491 RSPPPPPVHSPPPPSPIHSP-PPPPVYSPPPPP---PVYSPPPPPP 532
>At2g15180.1 68415.m01731 zinc knuckle (CCHC-type) family protein
contains Pfam domain PF00098: Zinc knuckle
Length = 474
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 194 GFLYSPDSSEEPGGRWQARPRQPGSRHRPRRHAPLHSPRRPTSQWSPPSPAGHRHLFTPT 373
G+ S D EEP G A +P R+ P +S +P W+P F PT
Sbjct: 36 GYSSSSDFEEEPDGG--APEPEPPDRYSSHATPPSYS--KPWISWNPIPKTNFYPTFYPT 91
Query: 374 QRPPFK 391
++ +K
Sbjct: 92 RKVIYK 97
>At1g64140.1 68414.m07266 expressed protein similar to putative
disease resistance protein GB:CAB40943 GI:4586107 from
[Arabidopsis thaliana]; weak similarity to Loricrin
(Swiss-Prot:P23490) [Homo sapiens]
Length = 646
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Frame = -3
Query: 591 PQCMNGGN---CTAPGLCSCPQGYQGRHCEGGICAQKCMNGG--KCIQKDTCFCXKGHYG 427
PQ N + C G +G GR G ++C G K + T +C G
Sbjct: 248 PQLKNSSSSKLCQVEGCHKGARGASGRCISHG-GGRRCQKHGCHKGAEGRTVYCKAHGGG 306
Query: 426 RRCEFSKC 403
RRCEF C
Sbjct: 307 RRCEFLGC 314
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,096,508
Number of Sequences: 28952
Number of extensions: 331651
Number of successful extensions: 1034
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -