Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K19
         (807 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.7  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/50 (22%), Positives = 26/50 (52%)
 Frame = +1

Query: 340 SFCET*YWIVFFFSLSLTALGAVDQRPFH*RTVQVGPSEFLTLIFSTANL 489
           +F +  Y + FF +LS+  + ++  + FH   + +   + + + F  A+L
Sbjct: 29  TFIQKFYAVAFFLALSIGVVVSIYSKSFHRNEIHI---KIVLMFFKEASL 75


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -2

Query: 236 NYDGSFCFVI*FGNLKIDSEVRGTYFVKKTNKTFTIALKLIFDMG 102
           N     C +I   N     ++ G  FV     T+TI L LIF  G
Sbjct: 214 NLHNKICNLIDEFNECFGLQILGILFVGVIYTTYTIFLLLIFGSG 258


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 525 FLTENCNY 548
           FLTENC+Y
Sbjct: 67  FLTENCDY 74


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 525 FLTENCNY 548
           FLTENC+Y
Sbjct: 67  FLTENCDY 74


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 438 SSGAKRIFNTHFLDSESERPDSLSETLNAFLTEN 539
           SSG  R+F TH          SLS  +   L E+
Sbjct: 244 SSGETRLFLTHRKPFHPASTQSLSRWIKMVLAES 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,821
Number of Sequences: 336
Number of extensions: 3476
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)