Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K18
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...   270   6e-73
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...   270   6e-73
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...   270   6e-73
Z93389-6|CAB07669.2|  300|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z67755-5|CAA91758.2|  966|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF200199-1|AAF13716.1|  966|Caenorhabditis elegans MES-1 protein.      29   3.8  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score =  270 bits (663), Expect = 6e-73
 Identities = 125/179 (69%), Positives = 145/179 (81%)
 Frame = -1

Query: 789 DGNTXLTLRSXIPIPGDYLSSDKLADVYLDFIKDFPMVSIEDPFDQDDWSAWANLTGRTP 610
           DG   L  ++       +LS ++L ++Y  FIK++P+VSIED FDQDDW  W    G T 
Sbjct: 285 DGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAFDQDDWDNWGKFHGATS 344

Query: 609 IQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHR 430
           IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKVNQIGSVTESI+A  L++ NGWG MVSHR
Sbjct: 345 IQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHR 404

Query: 429 SGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRP 253
           SGETEDTFIADLVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 405 SGETEDTFIADLVVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGHNFRNP 463


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score =  270 bits (663), Expect = 6e-73
 Identities = 125/179 (69%), Positives = 145/179 (81%)
 Frame = -1

Query: 789 DGNTXLTLRSXIPIPGDYLSSDKLADVYLDFIKDFPMVSIEDPFDQDDWSAWANLTGRTP 610
           DG   L  ++       +LS ++L ++Y  FIK++P+VSIED FDQDDW  W    G T 
Sbjct: 157 DGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAFDQDDWDNWGKFHGATS 216

Query: 609 IQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHR 430
           IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKVNQIGSVTESI+A  L++ NGWG MVSHR
Sbjct: 217 IQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHR 276

Query: 429 SGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRP 253
           SGETEDTFIADLVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 277 SGETEDTFIADLVVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGHNFRNP 335


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score =  270 bits (663), Expect = 6e-73
 Identities = 125/179 (69%), Positives = 145/179 (81%)
 Frame = -1

Query: 789 DGNTXLTLRSXIPIPGDYLSSDKLADVYLDFIKDFPMVSIEDPFDQDDWSAWANLTGRTP 610
           DG   L  ++       +LS ++L ++Y  FIK++P+VSIED FDQDDW  W    G T 
Sbjct: 254 DGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAFDQDDWDNWGKFHGATS 313

Query: 609 IQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHR 430
           IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKVNQIGSVTESI+A  L++ NGWG MVSHR
Sbjct: 314 IQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHR 373

Query: 429 SGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRP 253
           SGETEDTFIADLVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 374 SGETEDTFIADLVVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGHNFRNP 432


>Z93389-6|CAB07669.2|  300|Caenorhabditis elegans Hypothetical
           protein T13F3.5 protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -1

Query: 612 PIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKK 460
           P+++    L    P  I     +K C CL   V+++G+   SI  H+L+++
Sbjct: 14  PLEVANQILEKLEP--IYQLTSRKVCKCLKTSVDKLGTHFYSITFHILSRE 62


>Z67755-5|CAA91758.2|  966|Caenorhabditis elegans Hypothetical
           protein F54F7.5 protein.
          Length = 966

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -1

Query: 771 TLRSXIPIPGDYLSSDKLADVYLDFIKDFPMVSIEDPFDQDDWSAWANLTGRTPIQIVGD 592
           TLR+ I   G    +  LA  +  F     M S + PFD+    A  N + +  IQ + D
Sbjct: 744 TLRNYIAAVGSVFRNCSLATDHDSFASQQDMNSTQHPFDKLSTEADENNSKKVKIQEITD 803

Query: 591 DLTV 580
            L++
Sbjct: 804 SLSI 807


>AF200199-1|AAF13716.1|  966|Caenorhabditis elegans MES-1 protein.
          Length = 966

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -1

Query: 771 TLRSXIPIPGDYLSSDKLADVYLDFIKDFPMVSIEDPFDQDDWSAWANLTGRTPIQIVGD 592
           TLR+ I   G    +  LA  +  F     M S + PFD+    A  N + +  IQ + D
Sbjct: 744 TLRNYIAAVGSVFRNCSLATDHDSFASQQDMNSTQHPFDKLSTEADENNSKKVKIQEITD 803

Query: 591 DLTV 580
            L++
Sbjct: 804 SLSI 807


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,118,061
Number of Sequences: 27780
Number of extensions: 357429
Number of successful extensions: 815
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)