Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K18
         (792 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g74030.1 68414.m08573 enolase, putative similar to Swiss-Prot...   254   4e-68
At2g36530.1 68415.m04481 enolase identical to SWISS-PROT:P25696 ...   250   6e-67
At2g29560.1 68415.m03590 enolase, putative similar to enolase [S...   190   9e-49
At5g31412.1 68418.m03722 hypothetical protein contains Pfam doma...    30   1.5  
At4g37290.1 68417.m05277 expressed protein                             29   4.7  
At3g59870.1 68416.m06681 expressed protein hypothetical protein ...    29   4.7  
At5g16290.2 68418.m01904 acetolactate synthase small subunit, pu...    28   8.2  
At5g16290.1 68418.m01903 acetolactate synthase small subunit, pu...    28   8.2  
At2g40750.1 68415.m05026 WRKY family transcription factor contai...    28   8.2  

>At1g74030.1 68414.m08573 enolase, putative similar to
           Swiss-Prot:P15007 enolase (EC 4.2.1.11)
           (2-phosphoglycerate dehydratase)(2-phospho-D- glycerate
           hydro-lyase) [Drosophila melanogaster]
          Length = 477

 Score =  254 bits (623), Expect = 4e-68
 Identities = 122/179 (68%), Positives = 143/179 (79%)
 Frame = -1

Query: 789 DGNTXLTLRSXIPIPGDYLSSDKLADVYLDFIKDFPMVSIEDPFDQDDWSAWANLTGRTP 610
           DG   L  +         LS++ LAD+Y +FIKDFP+VSIEDPFDQDDWS+WA+L     
Sbjct: 300 DGRYDLNFKKQPNDGAHVLSAESLADLYREFIKDFPIVSIEDPFDQDDWSSWASLQSSVD 359

Query: 609 IQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHR 430
           IQ+VGDDL VTNPKRIA A++K++CN LLLKVNQIG+VTESI A L +K  GWG MVSHR
Sbjct: 360 IQLVGDDLLVTNPKRIAEAIKKQSCNALLLKVNQIGTVTESIQAALDSKAAGWGVMVSHR 419

Query: 429 SGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRP 253
           SGETED FIADL VGL++GQIKTGAPCRSERL+KYNQ+LRIEEELG N +YAG+ FR P
Sbjct: 420 SGETEDNFIADLSVGLASGQIKTGAPCRSERLSKYNQLLRIEEELG-NVRYAGEAFRSP 477


>At2g36530.1 68415.m04481 enolase identical to SWISS-PROT:P25696
           enolase (EC 4.2.1.11) (2-phosphoglycerate
           dehydratase)(2-phospho-D- glycerate hydro-lyase)
           [Arabidopsis thaliana]
          Length = 444

 Score =  250 bits (613), Expect = 6e-67
 Identities = 118/164 (71%), Positives = 136/164 (82%), Gaps = 2/164 (1%)
 Frame = -1

Query: 735 LSSDKLADVYLDFIKDFPMVSIEDPFDQDDWSAWANLTGR--TPIQIVGDDLTVTNPKRI 562
           +S D L D+Y  F+ ++P+VSIEDPFDQDDW  +A +T    T +QIVGDDL VTNPKR+
Sbjct: 278 ISGDALKDLYKSFVAEYPIVSIEDPFDQDDWEHYAKMTTECGTEVQIVGDDLLVTNPKRV 337

Query: 561 ATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGL 382
           A A+ +K+CN LLLKVNQIGSVTESI+A  ++KK GWG M SHRSGETEDTFIADL VGL
Sbjct: 338 AKAIAEKSCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGL 397

Query: 381 STGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRPV 250
           STGQIKTGAPCRSERLAKYNQ+LRIEEELG  A YAG NFR+PV
Sbjct: 398 STGQIKTGAPCRSERLAKYNQLLRIEEELGSEAIYAGVNFRKPV 441


>At2g29560.1 68415.m03590 enolase, putative similar to enolase
           [Spinacia oleracea] gi|8919731|emb|CAB96173
          Length = 475

 Score =  190 bits (463), Expect = 9e-49
 Identities = 85/161 (52%), Positives = 119/161 (73%)
 Frame = -1

Query: 741 DYLSSDKLADVYLDFIKDFPMVSIEDPFDQDDWSAWANLTGRTPIQIVGDDLTVTNPKRI 562
           ++ S++ + D+Y +   D+P+VSIEDPFD++DW      +     Q+VGDDL ++N KR+
Sbjct: 312 NFKSAEDMIDMYKEICNDYPIVSIEDPFDKEDWEHTKYFSSLGICQVVGDDLLMSNSKRV 371

Query: 561 ATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGL 382
             A+++ +CN LLLKVNQIG+VTE+I+   +A+   WG + SHR GETED+FI+DL VGL
Sbjct: 372 ERAIQESSCNALLLKVNQIGTVTEAIEVVKMARDAQWGVVTSHRCGETEDSFISDLSVGL 431

Query: 381 STGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFR 259
           +TG IK GAPCR ER  KYNQ+LRIEEELG  A YAG++++
Sbjct: 432 ATGVIKAGAPCRGERTMKYNQLLRIEEELGDQAVYAGEDWK 472


>At5g31412.1 68418.m03722 hypothetical protein contains Pfam domain,
           PF04937: Protein of unknown function (DUF 659)
          Length = 433

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = +2

Query: 281 LALTPSSSSMRRIWLYLARRSER----HGAPVLI*PVDKP 388
           L+LTPSSSS  R W      SER    +G PV   P +KP
Sbjct: 358 LSLTPSSSSFERNWSAFEGPSERDEEPNGEPVYQTPNEKP 397


>At4g37290.1 68417.m05277 expressed protein
          Length = 84

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 423 ETEDTFIADLVVGLSTGQIKTGAPCRSE 340
           +TE+ F+A L  GLS G IK   P   E
Sbjct: 31  KTEEKFVASLFDGLSLGSIKDSGPSPGE 58


>At3g59870.1 68416.m06681 expressed protein hypothetical protein
           F6E13.7 - Arabidopsis thaliana, PIR:T00674
          Length = 288

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = -1

Query: 684 PMVSIEDPFDQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVE 547
           PM   E   DQDD  +W N       +   D+ T T   RI T  +
Sbjct: 66  PMCFPEQTRDQDDVDSWVNKEDNVTCRFDSDEDTTTTGLRIPTQAQ 111


>At5g16290.2 68418.m01904 acetolactate synthase small subunit,
           putative similar to gi:5931761 from Nicotiana
           plumbaginifolia
          Length = 477

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 592 ITNNLNRRATSEVSPCRPIILVKRILNGHHGKIFDE 699
           +T N N  +  +V P  P    K +L+ H G ++DE
Sbjct: 265 LTGNGNASSGGDVYPVEPYNDFKPVLDAHWGMVYDE 300


>At5g16290.1 68418.m01903 acetolactate synthase small subunit,
           putative similar to gi:5931761 from Nicotiana
           plumbaginifolia
          Length = 477

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 592 ITNNLNRRATSEVSPCRPIILVKRILNGHHGKIFDE 699
           +T N N  +  +V P  P    K +L+ H G ++DE
Sbjct: 265 LTGNGNASSGGDVYPVEPYNDFKPVLDAHWGMVYDE 300


>At2g40750.1 68415.m05026 WRKY family transcription factor contains
           Pfam profile: PF03106 WRKY DNA -binding domain
          Length = 346

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
 Frame = -1

Query: 753 PIPGDYLSSDKLADVY--LDFIKDFPMVSIEDPFD-QDDWSAWANLTGRTPIQIVGDDLT 583
           P P D L S  L   +  +  +  F  V++  P   +  W+A       TP+   G D  
Sbjct: 59  PDPVDELMSKILGSFHKTISVLDSFDPVAVSVPIAVEGSWNASCGDDSATPVSCNGGDSG 118

Query: 582 VTNPKRIATAVEKKAC 535
            +  KR+     K+ C
Sbjct: 119 ESKKKRLGVGKGKRGC 134


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,091,628
Number of Sequences: 28952
Number of extensions: 334091
Number of successful extensions: 748
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)