BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_K17 (848 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.) 222 2e-58 SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8 SB_35269| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3 SB_37049| Best HMM Match : Acylphosphatase (HMM E-Value=0.82) 29 6.3 SB_51145| Best HMM Match : RCSD (HMM E-Value=1.3) 28 8.3 SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 28 8.3 SB_20414| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3 >SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 224 Score = 222 bits (543), Expect = 2e-58 Identities = 108/176 (61%), Positives = 124/176 (70%) Frame = -3 Query: 597 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 418 KK+WLDPNE NEIAN NSRQN+RK+IKDGL+IKKP VHSRARVRK EAR KGRH G G Sbjct: 48 KKIWLDPNECNEIANANSRQNVRKLIKDGLIIKKPEIVHSRARVRKADEARSKGRHSGHG 107 Query: 417 KRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGNVFKNKRVLM 238 KR+GTANARMPQK +W R AKKID H+YHSLYMK+KGNVFKNKRVLM Sbjct: 108 KRKGTANARMPQKTIWIRRMRVLRRLLRKYREAKKIDNHMYHSLYMKSKGNVFKNKRVLM 167 Query: 237 EYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXELLQTFAREDEAA 70 EYIH+KKAEKAR+K+LSDQ ++L +A+E+EAA Sbjct: 168 EYIHKKKAEKARSKLLSDQAEARRNKNKAAKQRRDDRMEQKRKDMLSAYAKEEEAA 223 Score = 35.5 bits (78), Expect = 0.055 Identities = 14/24 (58%), Positives = 22/24 (91%) Frame = -1 Query: 650 GSLKLQKRLAASVMRCGKRRCGWI 579 G+L+LQKRLAAS+++CGK++ W+ Sbjct: 30 GTLRLQKRLAASLLKCGKKKI-WL 52 >SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 175 Score = 29.1 bits (62), Expect = 4.8 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -3 Query: 477 RARVRKNTEARRKGRHCGFGKRRGTANAR 391 +A RK RR+ R G K+R TANAR Sbjct: 17 KANSRKKRRRRRRPRLTGLSKQRQTANAR 45 >SB_35269| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 172 Score = 28.7 bits (61), Expect = 6.3 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = +3 Query: 348 LEPFVFVPIVPSVAY--AHWQYLFSYQSHSDDPFYVPLCFCGH 470 ++ + F+P V + W++ ++ H+DDPF V C H Sbjct: 72 IKDYSFLPCCFKVCHRTCFWRWAHNHSIHADDPFEVACPHCRH 114 >SB_37049| Best HMM Match : Acylphosphatase (HMM E-Value=0.82) Length = 646 Score = 28.7 bits (61), Expect = 6.3 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = +3 Query: 348 LEPFVFVPIVPSVAY--AHWQYLFSYQSHSDDPFYVPLCFCGH 470 ++ + F+P V + W++ ++ H+DDPF V C H Sbjct: 72 IKDYSFLPCCFKVCHRTCFWRWAHNHSIHADDPFEVACPHCRH 114 >SB_51145| Best HMM Match : RCSD (HMM E-Value=1.3) Length = 248 Score = 28.3 bits (60), Expect = 8.3 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +1 Query: 106 FLLLGGNTFLAALAC 150 F L+GG TFLAALAC Sbjct: 70 FALMGGLTFLAALAC 84 >SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) Length = 787 Score = 28.3 bits (60), Expect = 8.3 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -1 Query: 122 PPRRRNCCRPSLEKTKPRLPLRSK 51 PP +N +P ++KTKP PL ++ Sbjct: 199 PPSEKNAFQPPMKKTKPSSPLLTR 222 >SB_20414| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 358 Score = 28.3 bits (60), Expect = 8.3 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 300 DACQSSWQFCTSGAIFLEPF-VFVPIVPSVAYAHW 401 D + S Q C FLEP VF P+ PS A+AH+ Sbjct: 192 DIVEKSQQACREHEAFLEPMGVFSPLPPS-AHAHF 225 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,340,725 Number of Sequences: 59808 Number of extensions: 483865 Number of successful extensions: 1315 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1227 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1314 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2407378809 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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