Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K16
(842 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 124 2e-29
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 121 1e-28
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 90 3e-19
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 55 1e-08
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 52 8e-08
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 34 0.022
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.089
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 0.36
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.62
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.1
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 29 1.1
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.1
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.9
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 1.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 28 1.9
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 27 2.5
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.5
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.3
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 27 3.3
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.3
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 4.4
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.4
SPAC1093.02 |||pyridoxamine 5'-phosphate oxidase |Schizosaccharo... 27 4.4
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.8
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 5.8
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 26 7.7
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 7.7
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 7.7
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 124 bits (298), Expect = 2e-29
Identities = 55/101 (54%), Positives = 76/101 (75%)
Frame = -2
Query: 523 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 344
KEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+ I
Sbjct: 510 KEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAID 569
Query: 343 DKCNDTIKWLDSNQLTDKEEYEHKQKELEGIYNPIITKMYQ 221
+TI+WLD N K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 570 KAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
Score = 68.5 bits (160), Expect = 1e-12
Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = -3
Query: 795 PXKXIXTFPPXLIXXPGTHXXIW-GXRXMTKDNNLXGKFELTGXPPGPAWRASNXVTXDI 619
P K F PG ++ G R TKD NL GKFEL+G PP P VT D+
Sbjct: 419 PTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDV 478
Query: 618 DANGILNVSAIEKSTXQGEQ 559
DANGILNVSA+EK T + ++
Sbjct: 479 DANGILNVSALEKGTGKTQK 498
Score = 31.5 bits (68), Expect = 0.15
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -1
Query: 671 GXHXAPRGVXQXXXXXXXXXXXXXXXPLSRSPPXKENKITITNDKGRL 528
G APRGV Q K KITITNDKGRL
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRL 508
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 121 bits (292), Expect = 1e-28
Identities = 54/101 (53%), Positives = 76/101 (75%)
Frame = -2
Query: 523 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 344
KEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+T+
Sbjct: 510 KEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVD 569
Query: 343 DKCNDTIKWLDSNQLTDKEEYEHKQKELEGIYNPIITKMYQ 221
+TI+WLDSN K+E+E KQKELE + NPI+ K+YQ
Sbjct: 570 KAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
Score = 67.7 bits (158), Expect = 2e-12
Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = -3
Query: 795 PXKXIXTFPPXLIXXPGTHXXIW-GXRXMTKDNNLXGKFELTGXPPGPAWRASNXVTXDI 619
P K F PG ++ G R TKD NL GKFEL+G PP P VT D+
Sbjct: 419 PTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDV 478
Query: 618 DANGILNVSAIEKSTXQGEQ 559
DANGILNVSA+EK T + ++
Sbjct: 479 DANGILNVSALEKGTGKTQK 498
Score = 31.5 bits (68), Expect = 0.15
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -1
Query: 671 GXHXAPRGVXQXXXXXXXXXXXXXXXPLSRSPPXKENKITITNDKGRL 528
G APRGV Q K KITITNDKGRL
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRL 508
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 90.2 bits (214), Expect = 3e-19
Identities = 42/102 (41%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = -2
Query: 523 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTI 347
+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L K+ DKQ +
Sbjct: 540 EEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAV 599
Query: 346 LDKCNDTIKWLD-SNQLTDKEEYEHKQKELEGIYNPIITKMY 224
LD D +WL+ + KEE+E ++++L+ + +PI K+Y
Sbjct: 600 LDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
Score = 63.3 bits (147), Expect = 4e-11
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = -3
Query: 726 GXRXMTKDNNLXGKFELTGXPPGPAWRASNXVTXDIDANGILNVSAIEKS 577
G R +TKDNNL GKF+L G PP P VT ++DANG+L VSA++KS
Sbjct: 472 GERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKS 521
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -1
Query: 671 GXHXAPRGVXQXXXXXXXXXXXXXXXP-LSRSPPXKENKITITNDKGRLXQ 522
G APRGV Q + +S K K+ I NDKGRL +
Sbjct: 490 GIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSE 540
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 54.8 bits (126), Expect = 1e-08
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = -3
Query: 726 GXRXMTKDNNLXGKFELTGXPPGPAWRASNXVTXDIDANGILNVSAIEKST 574
G R + +DN L G F+LTG P P + V+ D+DA+GI+NVSA +K+T
Sbjct: 486 GERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKAT 536
Score = 45.2 bits (102), Expect = 1e-05
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = -2
Query: 517 EIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKEKISDSDKQTIL 344
EIE MV +AEKYR D +KE I+ N ES C ++S ++ +KL ++ + + I
Sbjct: 554 EIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKIT 613
Query: 343 DKCNDTIKWLDSNQLTDKEEYEHKQKELEGIYNPIITKMYQ 221
D K ++ E+ + K E++ + + +Y+
Sbjct: 614 DLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 52.4 bits (120), Expect = 8e-08
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = -3
Query: 726 GXRXMTKDNNLXGKFELTGXPPGPAWRASNXVTXDIDANGILNVSAIEKST 574
G R +N G+F+LTG PP P +A T ++DANGIL V+A+EK+T
Sbjct: 448 GERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTT 498
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 34.3 bits (75), Expect = 0.022
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Frame = -2
Query: 517 EIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EKLKEKISDSDKQTI 347
E+ EAE DK ET+ KNALE Y + ++ ++D + S + +
Sbjct: 554 EVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAPFTNEEESSKFKEM 613
Query: 346 LDKCNDTIKWL-DSNQLTDKEEYEHKQKELEGIYNPI 239
L K D WL + + T K Y K ++L + PI
Sbjct: 614 LTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.089
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -2
Query: 520 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 341
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 340 K 338
K
Sbjct: 79 K 79
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.3 bits (65), Expect = 0.36
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = -2
Query: 523 KEEIERMVNEAEKYRNEDDKQKET-IQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 347
K+E+E + ++ + Y+ + K KE + K L + K E+ + +SD+ + I
Sbjct: 1092 KKELESLNDKDQLYQLQATKNKELEAKVKECLNNIKSLTKELENKEEKCQNLSDASLKYI 1151
Query: 346 -LDKCNDTIKWLDSNQLTDKEEYEHKQKELEGI 251
L + ++ + S+ K++YE Q +LEG+
Sbjct: 1152 ELQEIHENLLLKVSDLENYKKKYEGLQLDLEGL 1184
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 0.62
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -2
Query: 523 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 359
KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1607 KEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 382 KEKISDSDKQTILD-KCNDTIKWLDSNQLTDKEEYEHKQKELE 257
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = -2
Query: 538 KVVSXKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISD 365
K+ + + ER+ EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 79 KLQKQRAQEERIRQKEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRL 137
Query: 364 SDKQTILDKCNDTIKWLDSNQLTDKEEYEHKQKE 263
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 138 QEQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -2
Query: 499 NEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 320
N+ E + DDKQ + KN+LE+ M+ + E K D ++ LDK D K
Sbjct: 1272 NKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDNEMEDLDKMEDLEK 1330
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -2
Query: 520 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 344
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 343 DKCNDTIKWLDSNQLTDKEEYEHKQK 266
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -2
Query: 511 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC- 335
E ++EK ++ K + KNA ++ M DE+ E S K+ K
Sbjct: 100 EEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSK 159
Query: 334 NDTIKWLDSNQLTDKEEYEHKQKE 263
+D + LD + E+ + K+K+
Sbjct: 160 DDGSEALDDGDIESSEKDKKKKKK 183
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 547 PTTKVVSXKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 404
P S + E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 292 PAFNATSSETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 552 HYQRQRSSLPRKRSSVWLMRQRSTETRMTSKR 457
HYQR + L R +W+ STET +T KR
Sbjct: 572 HYQRSKRKL-FTRLYIWMKDGDSTETSLTFKR 602
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.5 bits (58), Expect = 2.5
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -2
Query: 475 EDDKQKETIQAKNALE-SYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN-- 305
E K+ ET++ KN+ + + ++ E LK +K ++++ IK + N
Sbjct: 503 EVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNVS 562
Query: 304 QLTDK-EEYEHKQKELEGIYNPII 236
+L +EY +K K+ E YN ++
Sbjct: 563 ELNGTIDEYRNKLKDKEETYNEVM 586
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 27.1 bits (57), Expect = 3.3
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Frame = -2
Query: 535 VVSXKEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKL 383
V + KE ER+ E + NED K+K IQ KN+ + + ST E
Sbjct: 483 VKAPKETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMP 542
Query: 382 KEKISDSDKQTILDKCND 329
K+ I K +I + +D
Sbjct: 543 KDTIPSRFKTSISTEVHD 560
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 550 LPTTKVVSXKEEIERMVNEAEKYRNED 470
L TK + EE+E VNE E++R D
Sbjct: 274 LAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 505 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 401
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -2
Query: 502 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 323
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 322 KWLDSNQLTDKEEYEHKQKELEGIYNPI 239
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 475 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 314
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1093.02 |||pyridoxamine 5'-phosphate oxidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -2
Query: 547 PTTKVVSXKEEIERMVNEAEKYRNEDD 467
P ++V++ +EE+E+ V E +K ED+
Sbjct: 153 PQSEVIADREELEKRVEEYKKKFGEDE 179
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 520 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 350
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = -2
Query: 535 VVSXKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 356
V + +++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K
Sbjct: 387 VGNQEDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSK 446
Query: 355 QTILD 341
T +D
Sbjct: 447 STSVD 451
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 7.7
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = -2
Query: 520 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 341
E+ + E EK + +A+ A + +E EK KEK D D++
Sbjct: 230 EDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQKDKDQE---- 285
Query: 340 KCNDTIKWLDSNQLTDKEEYEHKQKELE 257
DT+ D NQ+ +E E QKE++
Sbjct: 286 --QDTVS--DKNQI---DEIEKGQKEVD 306
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.8 bits (54), Expect = 7.7
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -2
Query: 538 KVVSXKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 359
K + I V + E+ + D T+Q K +S FS K + E L +KIS+ D
Sbjct: 390 KALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLLKKISEID 444
Query: 358 KQTILDKC 335
QT ++C
Sbjct: 445 SQTSFEQC 452
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.8 bits (54), Expect = 7.7
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -2
Query: 478 NEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 302
NE + Q + ++ K N + + E+ +K + + D L+ + + L N
Sbjct: 590 NELNSQIDELKLKLNEANKKYQELAISFENSNVKTQSVEPDNGLSLEALKNENQTLLKNL 649
Query: 301 LTDKEEYEHKQKELEGIYNPI 239
YEH QK + ++N +
Sbjct: 650 EDSTARYEHLQKSFKNVFNQL 670
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,500,653
Number of Sequences: 5004
Number of extensions: 41694
Number of successful extensions: 204
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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