Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K14
(791 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 58 2e-09
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 48 2e-06
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 48 2e-06
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 45 1e-05
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 42 1e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 42 1e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 41 2e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 41 2e-04
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 40 3e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 40 4e-04
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 39 7e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 35 0.012
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 33 0.047
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 30 0.33
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 27 3.1
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 26 5.4
SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces pom... 26 7.1
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 57.6 bits (133), Expect = 2e-09
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = -1
Query: 458 CGKSFRGNAFLTYHKRTHSEERQFKCE--TCGKAFHNPGNLYMHEKIHSDLRPYSC 297
CGK + + L H RTHS ER F C+ C KAF+ +L +H++ H++++P+SC
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSC 85
Score = 46.4 bits (105), Expect = 5e-06
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = -1
Query: 566 DQCSQEVHSAREYWNHFRRTHPDKPYPIQKDHICDV--CGKSFRGNAFLTYHKRTHSEER 393
++C ++ H R ++P+ +CD C K+F + L HKR H+ +
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERPF------VCDYTGCSKAFYRKSHLKIHKRCHTNVK 81
Query: 392 QFKC--ETCGKAFHNPGNLYMHEKIHSDLRPYSCS 294
F C + C F+ +L H ++H +PY+C+
Sbjct: 82 PFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACT 116
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 259 LSRHFRCHTGERPYDCEI--CGKAFSQSNSLKVHVR 158
L +H R H+ ERP+ C+ C KAF + + LK+H R
Sbjct: 40 LEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKR 75
Score = 35.9 bits (79), Expect = 0.007
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -1
Query: 416 KRTHSEERQFKC--ETCGKAFHNPGNLYMHEKIHSDLRPYSCSV--CFKA 279
K S ++ F C E CGK + P L H + HS+ RP+ C C KA
Sbjct: 14 KNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKA 63
Score = 35.5 bits (78), Expect = 0.009
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Frame = -1
Query: 485 IQKDHI--CDVCGKSFRGNAFLTYHKRTHS---EERQ-FKC--ETCGKAFHNPGNLYMH- 333
I++ H+ C +CG+ F+ A L +H H EER+ + C E C K+F L H
Sbjct: 198 IREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHI 257
Query: 332 EKIHSDLRPYSCSVC 288
IH + C C
Sbjct: 258 SVIHEGNMAFHCDSC 272
Score = 34.3 bits (75), Expect = 0.020
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -2
Query: 268 KGGLSRHFRCHTGERPYDCEI--CGKAFSQSNSLKVHVRTVHLKQPAPY 128
K L H RCHT +P+ C C F L+ H+ VH ++P PY
Sbjct: 67 KSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIE-VH-RKPKPY 113
Score = 33.5 bits (73), Expect = 0.035
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = -2
Query: 259 LSRHFRCHTGERPYDC--EICGKAFSQSNSLKVHVRTVH---LKQPAPYVS-RTRLERRL 98
L RH H +PY C E C + FS+ L+ H+ H L P Y R +
Sbjct: 100 LERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQ 159
Query: 97 KAGTGKDKPHE 65
K ++ HE
Sbjct: 160 KLQNHVNRAHE 170
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -2
Query: 259 LSRHFRC-HTGERPYDCEICGKAFSQSNSLKVHV-RTVHLKQPAPYVS 122
L +H H G + C+ CG F + L+ H+ R K PY++
Sbjct: 253 LKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYIN 300
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 458 CGKSFRGNAFLTYHKRT-HSEERQFKCETCGKAFHNPGNLYMH 333
C KSF ++ L H H F C++CG F L H
Sbjct: 243 CKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRH 285
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 47.6 bits (108), Expect = 2e-06
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -1
Query: 488 PIQKDHICDVCGKSFRGNAFLTYHKRT-HSEERQFKCETCGKAFHNPGNLYMHEKIHSDL 312
P K +C C K F+ + L H R+ H+ E+ F C CGK F NL HE++H +
Sbjct: 418 PGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNA 476
Query: 311 RP 306
P
Sbjct: 477 SP 478
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 232 GERPYDCEICGKAFSQSNSLKVHVRTVHL-KQPAPYVSRTRLERR 101
G + + C C K F +S L+ H+R++H ++P + R RR
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFSRR 463
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -1
Query: 482 QKDHICDV--CGKSFRGNAFLTYHKRTHSEERQFKCETCGKAFHNPGNLYMHEKIHSDLR 309
Q +++C C K F L H TH+ R F+C C K+F + HE++H+ ++
Sbjct: 567 QGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIK 626
Query: 308 PYSCSVC 288
++C C
Sbjct: 627 AFACVTC 633
Score = 35.1 bits (77), Expect = 0.012
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 374 CGKAFHNPGNLYMHEKIHSDLRPYSCSVCFKA 279
C K F NL H H++ RP+ CS+C K+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKS 608
Score = 34.7 bits (76), Expect = 0.015
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 259 LSRHFRCHTGERPYDCEICGKAFSQSNSLKVH 164
L H HT RP+ C IC K+F++ + + H
Sbjct: 587 LKSHMNTHTNYRPFQCSICKKSFARQHDKRRH 618
Score = 33.1 bits (72), Expect = 0.047
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 467 CDVCGKSFRGNAFLTYHKRTHSEERQFKCETCGKAFHNPGNLYMHEK 327
C +C KSF H++ H+ + F C TC + F L H K
Sbjct: 602 CSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 29.5 bits (63), Expect = 0.58
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 253 RHFRCHTGERPYDCEICGKAFSQSNSLKVHVRT 155
RH + HTG + + C C + F++ ++L H ++
Sbjct: 617 RHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 45.2 bits (102), Expect = 1e-05
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Frame = -2
Query: 259 LSRHFRCHTGERPYDCEI--CGKAFSQSNSLKVHVRTVH 149
L H R HTGE+P+ C + C ++F++S++L H+RTVH
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -2
Query: 253 RHFRCHTGERPYDCEI--CGKAFSQSNSLKVHVRTVHLKQ 140
RH R HTGE+P++C C K F++ + L HVRT HL++
Sbjct: 21 RHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRT-HLRK 59
Score = 33.5 bits (73), Expect = 0.035
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -1
Query: 479 KDHICDVCGKSFRGNAFLTYHKRTHSEERQFKCE--TCGKAFHNPGNLYMHEKIH 321
K + C C + F H R+H+ E+ F+C +C K F L H + H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 29.9 bits (64), Expect = 0.44
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -1
Query: 395 RQFKCETCGKAFHNPGNLYMHEKIHSDLRPYSCS 294
+ ++C C + FH + H + H+ +P+ CS
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECS 35
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -1
Query: 458 CGKSFRGNAFLTYHKRTHSEERQFKCETCGKAFHNPGNLYMHEKIHSDLRPYSCSVCFK 282
C K + H +TH +R ++C+ C F +L H +IH + RPY C C K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLK 507
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -2
Query: 268 KGGLSRHFRCHTGERPYDCEICGKAFSQSNSLKVHVRTVHLKQPAPYV 125
K + H + H +RPY C++C F + + LK H+R +H + PYV
Sbjct: 457 KYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLR-IH-ENGRPYV 502
Score = 32.7 bits (71), Expect = 0.062
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = -1
Query: 560 CSQEVHSAREYWNHFRRTHPDKPYPIQKDHICDVCGKSFRGNAFLTYHKRTHSEERQFKC 381
C++ + +H + D+PY CD+C F + L H R H R + C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYR------CDLCKAGFVRHHDLKRHLRIHENGRPYVC 503
Query: 380 ETCGKAFHNPGNLYMHEK 327
E C K F+ L H++
Sbjct: 504 E-CLKRFNRLDALNRHKQ 520
Score = 32.7 bits (71), Expect = 0.062
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 259 LSRHFRCHTGERPYDCEICGKAFSQSNSLKVH 164
L RH R H RPY CE C K F++ ++L H
Sbjct: 488 LKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 253 RHFRCHTGERPYDCEICGKAFSQSNSLKVHVRTVHLKQ 140
RHFR HT + + C C +F++S+ L HV H+KQ
Sbjct: 36 RHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQ 73
Score = 29.1 bits (62), Expect = 0.76
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -1
Query: 467 CDV--CGKSFRGNAFLTYHKRTHSEERQFKCETCGKAFHNPGNLYMH 333
CD C KSF H R+H+ + F C C +F L H
Sbjct: 19 CDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 467 CDVCGKSFRGNAFLTYHKRTHSEERQFKCET--CGKAFHNPGNLYMHEKIH 321
C C + F + L H +H+ ER F C+ CGKAF+ N+ H++IH
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 35.9 bits (79), Expect = 0.007
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 259 LSRHFRCHTGERPYDCEI--CGKAFSQSNSLKVHVR 158
L H HTGERP+ C+ CGKAF+ ++++ H R
Sbjct: 483 LKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQR 518
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -1
Query: 392 QFKCETCGKAFHNPGNLYMHEKIHSDLRPYSCSV--CFKA 279
+++C C + F P +L +H H+ RP+ C C KA
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKA 506
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 40.3 bits (90), Expect = 3e-04
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -2
Query: 268 KGGLSRHFRCHTGERPYDCEICGKAFSQSNSLKVHVRTVHLKQ 140
K L RH R H + + C C +AF++S+ L HV+ +HL++
Sbjct: 40 KEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQK 82
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 458 CGKSFRGNAFLTYHKRTHSEERQFKCETCGKAFHNPGNLYMH-EKIH 321
C KSF L H+RTH + F C C +AF L H +++H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 33.1 bits (72), Expect = 0.047
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 374 CGKAFHNPGNLYMHEKIHSDLRPYSCSVCFKA 279
C K+F +L HE+ H +++ +SCS C +A
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRA 64
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 39.9 bits (89), Expect = 4e-04
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = -1
Query: 503 PDKPYPIQKDHICDVCGKSFRGNAFLTYHKRTHSEERQFKCET-------CGKAFHNPGN 345
P+ P K ++C+ C ++F L H R+H+ E+ F C CG+ F
Sbjct: 60 PNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDL 119
Query: 344 LYMH-EKIHSDLRP 306
L H +KIH + +P
Sbjct: 120 LLRHQQKIHRNPQP 133
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 395 RQFKCETCGKAFHNPGNLYMHEKIHSDLRPYSCSVCFKAXQGEGR 261
+Q+ CETC +AF +L H + H++ +P++CS G GR
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGR 112
Score = 36.7 bits (81), Expect = 0.004
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 7/50 (14%)
Frame = -2
Query: 259 LSRHFRCHTGERPYDC-EI------CGKAFSQSNSLKVHVRTVHLKQPAP 131
L RH R HT E+P+ C EI CG+ FS+ + L H + +H + P P
Sbjct: 85 LKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH-RNPQP 133
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 226 RPYDCEICGKAFSQSNSLKVHVRTVHLKQP 137
+ Y CE C +AF++ LK H+R+ ++P
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKP 97
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 39.1 bits (87), Expect = 7e-04
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 256 SRHFRCHTGERPYDCEI--CGKAFSQSNSLKVHVR 158
+RH R HTGE+P+ C C K FS+S+ L H R
Sbjct: 42 TRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -1
Query: 506 HPDKPYPIQKDHICDVCGKSFRGNAFLTYHKRTHSEERQFKC--ETCGKAFHNPGNLYMH 333
+PD P P + C +C K+F T H RTH+ E+ C C K F L H
Sbjct: 19 NPDAPRPYK----CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Query: 332 EKIHSD 315
+IH++
Sbjct: 75 ARIHTN 80
Score = 31.9 bits (69), Expect = 0.11
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -1
Query: 578 PLKCDQCSQEVHSAREYWNHFRRTHPDKPYPIQKDHICDV--CGKSFRGNAFLTYHKRTH 405
P KC C++ + H RTH +K H+C C K F + LT H R H
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHI-RTHTG-----EKPHVCTFPGCAKRFSRSDELTRHARIH 78
Query: 404 SEERQFKCETCGKAFHN 354
+ + A +N
Sbjct: 79 TNANSRRNAAAAAAANN 95
Score = 29.9 bits (64), Expect = 0.44
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 395 RQFKCETCGKAFHNPGNLYMHEKIHSDLRPYSCS 294
R +KC C KAF+ + H + H+ +P+ C+
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCT 57
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 265 GGLSRHFRCHTGERPYDCEICGKAFSQSNSLKVHVRT 155
G SR + RPY C +C KAF + H+RT
Sbjct: 11 GKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRT 47
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 35.1 bits (77), Expect = 0.012
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 398 ERQFKCETCGKAFHNPGNLYMHEKIHSDLRPYSCSVC 288
+R F C+ C K F NL H+ HS P C C
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYC 64
Score = 33.1 bits (72), Expect = 0.047
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 467 CDVCGKSFRGNAFLTYHKRTHSEERQFKCETCGKAFHNPGNLYMH-EKIHSD 315
CD C K F + LT HK HS+ C C L H ++ H+D
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHND 84
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 259 LSRHFRCHTGERPYDCEICGKAFSQSNSLKVHVRTVH 149
L+RH CH+ P C C + + LK H++ H
Sbjct: 46 LTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 33.1 bits (72), Expect = 0.047
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 226 RPYDCEICGKAFSQSNSLKVHVRTVHLK 143
+PY CE+C K + N LK H HL+
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYHRTHSHLQ 424
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 401 EERQFKCETCGKAFHNPGNLYMHEKIHSDLR 309
E + ++CE C K + N L H + HS L+
Sbjct: 395 ENKPYRCEVCSKRYKNLNGLKYH-RTHSHLQ 424
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -2
Query: 229 ERPYDCEI--CGKAFSQSNSLKVH 164
++PY C + C KA+ N LK H
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYH 370
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 479 KDHICDVCGKSFRGNAFLTYHKRTHS 402
K + C+VC K ++ L YH RTHS
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYH-RTHS 421
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 30.3 bits (65), Expect = 0.33
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 7/67 (10%)
Frame = -1
Query: 467 CDVCGKSFRGNAFLTYH-KRTHSEERQFKCETCGK------AFHNPGNLYMHEKIHSDLR 309
C CG S R ++ K+ H + FKC+TC + ++ G Y H H
Sbjct: 258 CHSCGGSLRAGRIISASGKKLHPQ--CFKCDTCSQNLEHVGFYYREGKFYCHLDYHEQFS 315
Query: 308 PYSCSVC 288
P C C
Sbjct: 316 P-RCKHC 321
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/19 (52%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -1
Query: 398 ERQFKCETCGKAFHN-PGN 345
+RQFKC+TCG+ + PG+
Sbjct: 64 DRQFKCQTCGETMADCPGH 82
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 649 RTRGATTPRSAPRTTGRSPPTSLGP 575
R+ +T RSAPR+T RS +S P
Sbjct: 205 RSSARSTARSAPRSTQRSRSSSANP 229
>SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 554
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 208 ICGKAFSQSNSLKVHVRTVHLKQPAP 131
IC + F + + H+ TVH +P P
Sbjct: 172 ICSECFVEIRRAEPHLPTVHANEPTP 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,516,847
Number of Sequences: 5004
Number of extensions: 46845
Number of successful extensions: 204
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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