Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K13
         (803 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.4  
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                29   5.8  

>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1717

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 524  YLKVMGGQKIFRTNLAR-CYNRYKNEIQSNISRLKVEFT 411
            +L++M G +  R ++ R C NRY   I +  SRLK+ FT
Sbjct: 1569 FLELMDGGQDSRMSIGRFCGNRYPLSIMTATSRLKIVFT 1607


>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 7381

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 216  KNGQCLMAIQSGRNIKVFSHDNDGYFN*FMVFSRP 112
            KNGQ  +  + GR  K+F  + D Y      F RP
Sbjct: 1802 KNGQTFIRYREGRATKIFQGNYDRYITVTHTFKRP 1836


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,384,378
Number of Sequences: 59808
Number of extensions: 504463
Number of successful extensions: 1430
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)