BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K13
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC027951-1|AAH27951.1| 672|Homo sapiens C20orf32 protein protein. 31 6.4
AL121914-13|CAC12719.2| 786|Homo sapiens chromosome 20 open rea... 31 6.4
AJ276678-1|CAC00655.1| 785|Homo sapiens HEF like Protein protein. 31 6.4
BC008352-1|AAH08352.1| 421|Homo sapiens KIAA1909 protein protein. 30 8.5
AB067496-1|BAB67802.2| 1287|Homo sapiens KIAA1909 protein protein. 30 8.5
>BC027951-1|AAH27951.1| 672|Homo sapiens C20orf32 protein protein.
Length = 672
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 322 CNLTETKLVPQA*DQVRXLSSSYIVIYTTRTFGIIEKWPV 203
CNLT++ L + DQ++ +S+SY ++ T+ WP+
Sbjct: 505 CNLTDSNLQNRIRDQMQTISNSYRILLETKESLDNRNWPL 544
>AL121914-13|CAC12719.2| 786|Homo sapiens chromosome 20 open
reading frame 32 protein.
Length = 786
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 322 CNLTETKLVPQA*DQVRXLSSSYIVIYTTRTFGIIEKWPV 203
CNLT++ L + DQ++ +S+SY ++ T+ WP+
Sbjct: 505 CNLTDSNLQNRIRDQMQTISNSYRILLETKESLDNRNWPL 544
>AJ276678-1|CAC00655.1| 785|Homo sapiens HEF like Protein protein.
Length = 785
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 322 CNLTETKLVPQA*DQVRXLSSSYIVIYTTRTFGIIEKWPV 203
CNLT++ L + DQ++ +S+SY ++ T+ WP+
Sbjct: 504 CNLTDSNLQNRIRDQMQTISNSYRILLETKESLDNRNWPL 543
>BC008352-1|AAH08352.1| 421|Homo sapiens KIAA1909 protein protein.
Length = 421
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2
Query: 676 SFPFSXSSWIRFRYRTKTIPRTFRYASVSKLNTLCLCNYAPFPRWLCEQA 527
SFP+S WI FR R + A + N+ C N PR E A
Sbjct: 248 SFPYSHGDWICFRQRLEHFAANCEEAIIFLQNSFCSLNTHRTPRTAQEVA 297
>AB067496-1|BAB67802.2| 1287|Homo sapiens KIAA1909 protein protein.
Length = 1287
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2
Query: 676 SFPFSXSSWIRFRYRTKTIPRTFRYASVSKLNTLCLCNYAPFPRWLCEQA 527
SFP+S WI FR R + A + N+ C N PR E A
Sbjct: 350 SFPYSHGDWICFRQRLEHFAANCEEAIIFLQNSFCSLNTHRTPRTAQEVA 399
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,059,849
Number of Sequences: 237096
Number of extensions: 2363945
Number of successful extensions: 7974
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7974
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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