Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K12
(800 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 59 5e-09
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 59 5e-09
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 59 5e-09
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 55 6e-08
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 55 6e-08
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 38 0.012
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 33 0.20
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 5.8
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 29 5.8
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 29 5.8
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 29 5.8
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 29 5.8
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 5.8
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 5.8
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 29 5.8
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 29 5.8
SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07) 28 7.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQY 603
GEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQY 425
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -3
Query: 777 GNSTRHSRSCSSAFSEQFTAMFRRKAFLHXYT 682
GNST + SEQFTAMFRRKAFLH YT
Sbjct: 369 GNSTA-IQELFKRISEQFTAMFRRKAFLHWYT 399
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQY 603
GEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 345 GEGMDEMEFTEAESNMNDLVSEYQQY 370
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -3
Query: 777 GNSTRHSRSCSSAFSEQFTAMFRRKAFLHXYT 682
GNST + SEQFTAMFRRKAFLH YT
Sbjct: 314 GNSTA-IQELFKRISEQFTAMFRRKAFLHWYT 344
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQY 603
GEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQY 425
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -3
Query: 777 GNSTRHSRSCSSAFSEQFTAMFRRKAFLHXYT 682
GNST + SEQFTAMFRRKAFLH YT
Sbjct: 369 GNSTA-IQELFKRISEQFTAMFRRKAFLHWYT 399
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 55.2 bits (127), Expect = 6e-08
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQY 603
GEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 165 GEGMDEMEFTEAESNMHDLIAEYQQY 190
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3
Query: 732 EQFTAMFRRKAFLHXYT 682
EQFTAMFRRKAFLH YT
Sbjct: 148 EQFTAMFRRKAFLHWYT 164
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 55.2 bits (127), Expect = 6e-08
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQY 603
GEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 227 GEGMDEMEFTEAESNMHDLIAEYQQY 252
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3
Query: 732 EQFTAMFRRKAFLHXYT 682
EQFTAMFRRKAFLH YT
Sbjct: 210 EQFTAMFRRKAFLHWYT 226
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3
Query: 738 FSEQFTAMFRRKAFLHXYT 682
F+EQF AMFRR+AFLH YT
Sbjct: 200 FTEQFAAMFRRRAFLHWYT 218
Score = 32.7 bits (71), Expect(2) = 0.012
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -1
Query: 656 FTEAESNMNDLVSEYQQY 603
+ A+SN+NDL+SEYQQY
Sbjct: 256 YFSADSNLNDLISEYQQY 273
Score = 23.8 bits (49), Expect(2) = 0.012
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 677 EGMDEMEFTEAESN 636
EGMD +EFTE + N
Sbjct: 220 EGMDPLEFTEIKRN 233
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -1
Query: 677 EGMDEMEFTEAESNMNDLVSEYQQ 606
EGMD +F EA++++ DL+S YQQ
Sbjct: 306 EGMDSQQFEEADNDILDLISTYQQ 329
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 24 GEGMEEGEFSEAREDLAALEKDYEE 48
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 208 GEGMEEGEFSEAREDLAALEKDYEE 232
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 394 GEGMEEGEFSEAREDLAALEKDYEE 418
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 108 GEGMEEGEFSEAREDLAALEKDYEE 132
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 562 GEGMEEGEFSEAREDLAALEKDYEE 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 347 GEGMEEGEFSEAREDLAALEKDYEE 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 781 GEGMEEGEFSEAREDLAALEKDYEE 805
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 1190 GEGMEEGEFSEAREDLAALEKDYEE 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 410 GEGMEEGEFSEAREDLAALEKDYEE 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 395 GEGMEEGEFSEAREDLAALEKDYEE 419
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 826 GEGMEEGEFSEAREDLAALEKDYEE 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 375 GEGMEEGEFSEAREDLAALEKDYEE 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 410 GEGMEEGEFSEAREDLAALEKDYEE 434
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 843 GEGMEEGEFSEAREDLAALEKDYEE 867
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 995 GEGMEEGEFSEAREDLAALEKDYEE 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 335 GEGMEEGEFSEAREDLAALEKDYEE 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 208 GEGMEEGEFSEAREDLAALEKDYEE 232
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 323 GEGMEEGEFSEAREDLAALEKDYEE 347
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 680 GEGMDEMEFTEAESNMNDLVSEYQQ 606
GEGM+E EF+EA ++ L +Y++
Sbjct: 410 GEGMEEGEFSEAREDLAALEKDYEE 434
>SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07)
Length = 502
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 183 NQVQPYKKKDLFPLCDSVTAPRACSAEGLASLRVAVYCNKHSRAALR 323
+++Q L LC SV+ C+ A L ++C + S A LR
Sbjct: 136 SRLQQLASLSLTDLCQSVSGDEGCAVAETAELIALMHCLESSAATLR 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,985,673
Number of Sequences: 59808
Number of extensions: 372697
Number of successful extensions: 948
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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