Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K11
(849 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O60832 Cluster: H/ACA ribonucleoprotein complex subunit... 204 2e-51
UniRef50_Q10KT9 Cluster: H/ACA ribonucleoprotein complex subunit... 179 9e-44
UniRef50_O13473 Cluster: Centromere/microtubule-binding protein ... 177 2e-43
UniRef50_Q7QR24 Cluster: GLP_576_9913_8648; n=1; Giardia lamblia... 135 2e-30
UniRef50_Q57612 Cluster: Probable tRNA pseudouridine synthase B;... 103 6e-21
UniRef50_A0RUE0 Cluster: Pseudouridine synthase; n=2; Thermoprot... 96 1e-18
UniRef50_Q8PV20 Cluster: Probable tRNA pseudouridine synthase B;... 89 1e-16
UniRef50_A3MS77 Cluster: Pseudouridylate synthase; n=2; Thermopr... 86 9e-16
UniRef50_Q975L5 Cluster: Probable tRNA pseudouridine synthase B;... 85 3e-15
UniRef50_UPI00015BB216 Cluster: putative rRNA pseudouridine synt... 81 3e-14
UniRef50_P60346 Cluster: Probable tRNA pseudouridine synthase B;... 81 5e-14
UniRef50_Q9YDC3 Cluster: Probable tRNA pseudouridine synthase B;... 79 1e-13
UniRef50_A3CSX1 Cluster: Pseudouridylate synthase; n=2; Methanom... 60 5e-08
UniRef50_Q2FRP0 Cluster: Pseudouridylate synthase; n=1; Methanos... 56 1e-06
UniRef50_A7I5M0 Cluster: Pseudouridylate synthase; n=1; Candidat... 46 0.001
UniRef50_Q5UXH1 Cluster: Probable tRNA pseudouridine synthase B;... 46 0.002
UniRef50_Q8SRU6 Cluster: PSEUDOURIDINE SYNTHASE B; n=1; Encephal... 42 0.015
UniRef50_Q9YD14 Cluster: RNA (Cytosine-C(5)-)-methyltransferase;... 41 0.034
UniRef50_Q4P5U6 Cluster: Putative uncharacterized protein; n=1; ... 40 0.10
UniRef50_Q98SB1 Cluster: Putative pseudouridylate synthase; n=1;... 38 0.24
UniRef50_Q0W3A3 Cluster: Putative 3\'-phosphoadenosine 5\'-phosp... 38 0.32
UniRef50_A2SQI0 Cluster: Phosphoadenosine phosphosulfate reducta... 38 0.32
UniRef50_UPI00015B5167 Cluster: PREDICTED: similar to ENSANGP000... 38 0.42
UniRef50_Q9UXT4 Cluster: Sun/NOL1/NOP nucleolar protein; n=4; Th... 38 0.42
UniRef50_UPI0000E4ED42 Cluster: X-linked retinitis pigmentosa GT... 37 0.74
UniRef50_A7D2R6 Cluster: Pseudouridylate synthase TruB domain pr... 37 0.74
UniRef50_A5KC57 Cluster: Putative uncharacterized protein; n=1; ... 36 0.97
UniRef50_A3CW62 Cluster: PUA domain containing protein; n=3; Met... 36 0.97
UniRef50_Q6BY19 Cluster: Debaryomyces hansenii chromosome A of s... 36 1.3
UniRef50_Q5UX86 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q17GE7 Cluster: Tripartite motif protein trim2,3; n=2; ... 36 1.7
UniRef50_Q9LJM0 Cluster: Gb|AAD50048.1; n=6; Arabidopsis thalian... 35 2.2
UniRef50_A2FDY5 Cluster: Putative uncharacterized protein; n=1; ... 35 3.0
UniRef50_Q8PYH9 Cluster: Conserved protein; n=3; Methanosarcinac... 35 3.0
UniRef50_A3H7P0 Cluster: Fmu; n=1; Caldivirga maquilingensis IC-... 34 3.9
UniRef50_A2DQV3 Cluster: Putative uncharacterized protein; n=1; ... 34 5.2
UniRef50_Q9W3Z5 Cluster: CG3918-PA; n=1; Drosophila melanogaster... 33 9.1
UniRef50_Q8SZB7 Cluster: RE07960p; n=2; Sophophora|Rep: RE07960p... 33 9.1
UniRef50_Q7RKK5 Cluster: Putative uncharacterized protein PY0289... 33 9.1
UniRef50_Q22GD7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.1
UniRef50_Q2NF46 Cluster: Predicted RNA-binding protein; n=1; Met... 33 9.1
UniRef50_A7D1S4 Cluster: PUA domain containing protein; n=1; Hal... 33 9.1
UniRef50_Q09280 Cluster: Uncharacterized protein C45G9.8; n=1; C... 33 9.1
>UniRef50_O60832 Cluster: H/ACA ribonucleoprotein complex subunit 4;
n=78; Eukaryota|Rep: H/ACA ribonucleoprotein complex
subunit 4 - Homo sapiens (Human)
Length = 514
Score = 204 bits (499), Expect = 2e-51
Identities = 87/120 (72%), Positives = 111/120 (92%)
Frame = -1
Query: 693 NXXDETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIV 514
N DE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV+QEIV
Sbjct: 275 NHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIV 334
Query: 513 IVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 334
++TTKGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+
Sbjct: 335 VITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIK 394
Score = 48.8 bits (111), Expect = 2e-04
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Frame = -2
Query: 362 KLHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYN----------VKKEPE-NGDGVKE 216
K +KK QG LDK+GKP ++TP W YV+Y+ V K P+ + K
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAPQVVAEAAKT 444
Query: 215 GSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQ 51
RKR + + + E P + + +K+E + ++A E+ A +S T ++
Sbjct: 445 AKRKRESESESDETPPAAPQLIKKEKKKSKKDKKAKAGLESGAEPGDGDSDTTKKK 500
>UniRef50_Q10KT9 Cluster: H/ACA ribonucleoprotein complex subunit 4,
putative, expressed; n=8; Oryza sativa|Rep: H/ACA
ribonucleoprotein complex subunit 4, putative, expressed
- Oryza sativa subsp. japonica (Rice)
Length = 591
Score = 179 bits (435), Expect = 9e-44
Identities = 78/132 (59%), Positives = 107/132 (81%)
Frame = -1
Query: 732 HDARHXRRTMVI*NXXDETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGIL 553
HD R M N DE+YLRR++ PLE LL ++KR+ +KDSAVNA+CYGAK+++PG+L
Sbjct: 282 HDVMDARWAMD--NFNDESYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLL 339
Query: 552 RYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWG 373
R+E+ IEV +E+V++TTKGEA+A+ +A MTT+ MA+CDHG AK+KRV+M+RDTYPRKWG
Sbjct: 340 RFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKWG 399
Query: 372 LGPKASQKKILI 337
LGP A +KK ++
Sbjct: 400 LGPVALKKKKMV 411
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -2
Query: 353 RKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVKEG--SRKRTASTANA 180
+KK +G LDK+GKPNE TP EWL + V P GD + G +
Sbjct: 406 KKKKMVAEGLLDKHGKPNEKTPSEWLRNAV------LPAGGDAMIAGIAAAPEPEKPKVK 459
Query: 179 EDPDVSIEVKQE 144
E+ DV+ E K++
Sbjct: 460 EEADVAEETKEK 471
>UniRef50_O13473 Cluster: Centromere/microtubule-binding protein
CBF5; n=54; cellular organisms|Rep:
Centromere/microtubule-binding protein CBF5 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 474
Score = 177 bits (432), Expect = 2e-43
Identities = 76/116 (65%), Positives = 101/116 (87%)
Frame = -1
Query: 693 NXXDETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIV 514
N DE+YLR++I+PLE LL+ +KRI +KDSAVNAVCYGAK+++PG+LRYE+GIE+ E+V
Sbjct: 244 NTRDESYLRKIIQPLETLLVGYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDEVV 303
Query: 513 IVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKK 346
++TTKGEA+A+A+A M+T +A+CDHGV AK+KR IMERD YPR+WGLGP A +KK
Sbjct: 304 LITTKGEAIAVAIAQMSTVDLATCDHGVVAKVKRCIMERDLYPRRWGLGPIAQKKK 359
Score = 50.0 bits (114), Expect = 7e-05
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = -2
Query: 353 RKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVKEGSRKRTASTANAED 174
+KK GKLDKYG+ NENTP+ W +YV+ EP K K ++
Sbjct: 357 KKKQMKADGKLDKYGRANENTPETWKKTYVSLE-NAEPTTAPASK-SEEKPLIKEVEKKE 414
Query: 173 PDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPETAE--QPADD 39
+ E K+E K+D + E + E E E + ADD
Sbjct: 415 VEQKEESKEESKTPEEKKDKKEKKEKKDKKEKKEKKEKKEKKRKADD 461
>UniRef50_Q7QR24 Cluster: GLP_576_9913_8648; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_576_9913_8648 - Giardia lamblia ATCC
50803
Length = 421
Score = 135 bits (326), Expect = 2e-30
Identities = 62/120 (51%), Positives = 86/120 (71%)
Frame = -1
Query: 693 NXXDETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIV 514
N DE+YLR+V+ PLE LL ++KRIF+KDS++NA+ YGA + + G+LRY+ I + +V
Sbjct: 245 NLGDESYLRKVVMPLEYLLKSYKRIFVKDSSINALTYGAPLHIQGVLRYDPRISIGDTVV 304
Query: 513 IVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 334
+V+TKGEAVAL A M + G+ +K+KRVIM+RD Y R+WGLGP A KK LI+
Sbjct: 305 LVSTKGEAVALGTATMGAQDIMGVSRGIVSKVKRVIMDRDLYDRQWGLGPTALLKKQLIK 364
Score = 37.9 bits (84), Expect = 0.32
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 350 KKSSYXQGKLDKYGKPNENTPKEWLNSYVN 261
KK G+LDKYG N++TPKEW+ + N
Sbjct: 359 KKQLIKNGQLDKYGGINKDTPKEWVERFQN 388
>UniRef50_Q57612 Cluster: Probable tRNA pseudouridine synthase B;
n=9; Euryarchaeota|Rep: Probable tRNA pseudouridine
synthase B - Methanococcus jannaschii
Length = 336
Score = 103 bits (247), Expect = 6e-21
Identities = 50/103 (48%), Positives = 69/103 (66%)
Frame = -1
Query: 684 DETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVT 505
DE LRRVIKP+E L K++ +KDSAV+A+C+GA V + GI + GI + +++ T
Sbjct: 230 DEEELRRVIKPMEYGLRHLKKVVVKDSAVDAICHGADVYVRGIAKLSKGIGKGETVLVET 289
Query: 504 TKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKW 376
KGEAVA+ ALM T + + D GVA ++RV M+R TYPR W
Sbjct: 290 LKGEAVAVGKALMNTKEILNADKGVAVDVERVYMDRGTYPRMW 332
>UniRef50_A0RUE0 Cluster: Pseudouridine synthase; n=2;
Thermoprotei|Rep: Pseudouridine synthase - Cenarchaeum
symbiosum
Length = 333
Score = 95.9 bits (228), Expect = 1e-18
Identities = 45/103 (43%), Positives = 66/103 (64%)
Frame = -1
Query: 684 DETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVT 505
D + L+R+I+P+E L K + I+DSAV+A+C+GA++ +PGIL+ D + + + T
Sbjct: 221 DGSRLQRIIRPVEEALAGIKAVVIRDSAVDALCHGAQLAIPGILQVSDNLRIGDLAGVYT 280
Query: 504 TKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKW 376
KGE VALA A M +A G A K KR+IM+ DTYP+ W
Sbjct: 281 QKGEVVALAEAEMEAEVIADATKGHAFKTKRLIMKTDTYPKSW 323
>UniRef50_Q8PV20 Cluster: Probable tRNA pseudouridine synthase B;
n=6; Euryarchaeota|Rep: Probable tRNA pseudouridine
synthase B - Methanosarcina mazei (Methanosarcina
frisia)
Length = 338
Score = 89.4 bits (212), Expect = 1e-16
Identities = 45/103 (43%), Positives = 63/103 (61%)
Frame = -1
Query: 684 DETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVT 505
DE+ LRRVI+P+E + +I ++DSAV+A+C GA + +PGI + + + + T
Sbjct: 227 DESELRRVIRPMESAVSHLPKIILRDSAVDAICSGASLAVPGITGLDSNLAEGELTGLFT 286
Query: 504 TKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKW 376
KGE VALA A MTT + G+AA RV+ME TYPR W
Sbjct: 287 LKGELVALAKAKMTTEEILKASAGIAASPIRVLMEAGTYPRGW 329
>UniRef50_A3MS77 Cluster: Pseudouridylate synthase; n=2;
Thermoproteaceae|Rep: Pseudouridylate synthase -
Pyrobaculum calidifontis (strain JCM 11548 / VA1)
Length = 333
Score = 86.2 bits (204), Expect = 9e-16
Identities = 39/109 (35%), Positives = 64/109 (58%)
Frame = -1
Query: 684 DETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVT 505
D+TYLRRV+ P+E + +I+++DSAV+A+C GA + PG+ ++E + T
Sbjct: 220 DDTYLRRVLLPIEEIARPLPKIWVRDSAVDALCNGAPLAAPGVAKFEHPFSRGDLVAYFT 279
Query: 504 TKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKA 358
KGE + + AL+ + + + G+ A+ RV+M R TYP W G K+
Sbjct: 280 LKGELIGIGRALVDSEEVKKMEKGLVARTDRVVMPRGTYPPMWRRGGKS 328
>UniRef50_Q975L5 Cluster: Probable tRNA pseudouridine synthase B;
n=11; Sulfolobaceae|Rep: Probable tRNA pseudouridine
synthase B - Sulfolobus tokodaii
Length = 237
Score = 84.6 bits (200), Expect = 3e-15
Identities = 41/106 (38%), Positives = 61/106 (57%)
Frame = -1
Query: 693 NXXDETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIV 514
N DE+ LR+++ P+E +I I D+AV+A+ YGA + PGI+ Y+ V +
Sbjct: 129 NCKDESDLRKILLPMEYATCGMPKILIDDNAVDAISYGAMLTAPGIVAYQR-FRVKDTVA 187
Query: 513 IVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKW 376
I+T KGE VA+ A + + + G+ K KRV+M RD YPR W
Sbjct: 188 ILTLKGELVAIGEADVDSQKLVDMKKGIVVKPKRVLMPRDIYPRSW 233
>UniRef50_UPI00015BB216 Cluster: putative rRNA pseudouridine
synthase; n=1; Ignicoccus hospitalis KIN4/I|Rep:
putative rRNA pseudouridine synthase - Ignicoccus
hospitalis KIN4/I
Length = 349
Score = 81.0 bits (191), Expect = 3e-14
Identities = 44/116 (37%), Positives = 66/116 (56%)
Frame = -1
Query: 693 NXXDETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIV 514
N D++ L++ I P E +I IKD AV+AV +GA V + G+ D ++ +
Sbjct: 233 NYGDDSLLKKYIMPCEVATCHMPKIMIKDGAVDAVAHGANVSIRGVAALTDNMKKGDVVA 292
Query: 513 IVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKK 346
+V+ KGE VA+A AL+++ + G AK KRVIM+ TYP W KASQ++
Sbjct: 293 VVSLKGELVAIAQALVSSQEALKMEKGWVAKTKRVIMKPGTYPDVW-RKKKASQQE 347
>UniRef50_P60346 Cluster: Probable tRNA pseudouridine synthase B;
n=12; Archaea|Rep: Probable tRNA pseudouridine synthase
B - Nanoarchaeum equitans
Length = 348
Score = 80.6 bits (190), Expect = 5e-14
Identities = 39/103 (37%), Positives = 61/103 (59%)
Frame = -1
Query: 684 DETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVT 505
+E Y+R+V P+E + K+I+I DSAV A+ +GA + +PGI + I+ + I T
Sbjct: 242 NEEYIRKVFLPVEEAVKHLKKIYILDSAVAAIVHGANLAVPGIAKLYSNIKKGDLVSIHT 301
Query: 504 TKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKW 376
KGE VA+ +ALM + M G+A ++RV M+ YP+ W
Sbjct: 302 LKGELVAIGIALMDSKEMLEKKRGIAVDIERVFMKPGLYPKMW 344
>UniRef50_Q9YDC3 Cluster: Probable tRNA pseudouridine synthase B;
n=24; Thermoprotei|Rep: Probable tRNA pseudouridine
synthase B - Aeropyrum pernix
Length = 354
Score = 79.4 bits (187), Expect = 1e-13
Identities = 35/99 (35%), Positives = 57/99 (57%)
Frame = -1
Query: 672 LRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGE 493
LRRV+ P E + ++ ++DSAV ++ +GA++ PG+ E+G+E + ++T KGE
Sbjct: 247 LRRVVIPGEYSVCHIPKVLVRDSAVESLTHGAQLAAPGVAAVEEGVEKGGMVALMTLKGE 306
Query: 492 AVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKW 376
+ L AL + M + G+ R+IMER YPR W
Sbjct: 307 LIGLGKALASAQEMLEAERGIVVSPTRIIMERGLYPRMW 345
>UniRef50_A3CSX1 Cluster: Pseudouridylate synthase; n=2;
Methanomicrobiales|Rep: Pseudouridylate synthase -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 302
Score = 60.5 bits (140), Expect = 5e-08
Identities = 31/99 (31%), Positives = 52/99 (52%)
Frame = -1
Query: 672 LRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGE 493
L+ +I P + ++ ++D+AV+AVC+GA + G++ E G + + IVT +GE
Sbjct: 198 LQGMILPPAAAVADLAKVVVRDTAVDAVCHGAVLAGVGVVGKEGGFAKGETVAIVTERGE 257
Query: 492 AVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKW 376
V L L+ +S + + G V+M TYPR W
Sbjct: 258 LVGLGKGLVNSSALKPGEPGFVVAPTTVLMRPGTYPRGW 296
>UniRef50_Q2FRP0 Cluster: Pseudouridylate synthase; n=1;
Methanospirillum hungatei JF-1|Rep: Pseudouridylate
synthase - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 310
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/104 (28%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = -1
Query: 684 DETYLRRVIK-PLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIV 508
D+TYLR++I+ PLE L RI +K+SA +A+C+GA++ G++ + D ++ +++V++
Sbjct: 200 DDTYLRKIIRSPLEALH-GFPRIQMKESAADAICHGARLSSRGVVSH-DTFQM-EDLVVM 256
Query: 507 TTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKW 376
+ + + AL+++S + + G+ + V+ + YP W
Sbjct: 257 LAGDDFIGIGEALVSSSRIVPGEKGLVVAPRLVMQDIGVYPAVW 300
>UniRef50_A7I5M0 Cluster: Pseudouridylate synthase; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Pseudouridylate synthase -
Methanoregula boonei (strain 6A8)
Length = 322
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/82 (25%), Positives = 44/82 (53%)
Frame = -1
Query: 621 IFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASC 442
+ ++D+A++A+C+GA + G++ ++ DQ + +++ K E + L +L ++
Sbjct: 226 VTVRDTAIDALCHGAALAGVGVIDCDE-FRKDQIVAVLSQKREFIGLGKSLAPSAAWKPG 284
Query: 441 DHGVAAKLKRVIMERDTYPRKW 376
G+ + V M TYPR W
Sbjct: 285 TPGLVVAMTTVFMAPGTYPRGW 306
>UniRef50_Q5UXH1 Cluster: Probable tRNA pseudouridine synthase B;
n=3; Halobacteriaceae|Rep: Probable tRNA pseudouridine
synthase B - Haloarcula marismortui (Halobacterium
marismortui)
Length = 314
Score = 45.6 bits (103), Expect = 0.002
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = -1
Query: 684 DETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILR---YEDG---IEVDQ 523
DE LR +I+P E L R+ I SA V GA V PG++ E G E+D
Sbjct: 219 DEAQLREIIQPAERALSHLPRVTIAPSAAREVAEGAPVYAPGVIETGPAEVGDATPEIDS 278
Query: 522 EIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIM 403
++V VT G AV L T + D G+ +L R+++
Sbjct: 279 QVVSVTPDGAAVCLG----TLVSDPDADSGLVVELDRMLV 314
>UniRef50_Q8SRU6 Cluster: PSEUDOURIDINE SYNTHASE B; n=1;
Encephalitozoon cuniculi|Rep: PSEUDOURIDINE SYNTHASE B -
Encephalitozoon cuniculi
Length = 203
Score = 42.3 bits (95), Expect = 0.015
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = -1
Query: 621 IFIKDSAVNAVCYGAKVLLPGILRYED----GIEVDQEIVIVTTKGEAVALAVALMTTST 454
+F+ + A+ +C GA V++PG+L+Y+D G E IV+ VA+ A++
Sbjct: 118 VFLDEGALEPLCRGADVMIPGVLKYKDLIKKGFEAGDTIVVRIIGKSIVAVGEAIVGLKD 177
Query: 453 MASCDHGVAAKL 418
M + GV ++
Sbjct: 178 MEASSRGVGIEV 189
>UniRef50_Q9YD14 Cluster: RNA (Cytosine-C(5)-)-methyltransferase;
n=1; Aeropyrum pernix|Rep: RNA
(Cytosine-C(5)-)-methyltransferase - Aeropyrum pernix
Length = 388
Score = 41.1 bits (92), Expect = 0.034
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = -1
Query: 627 KRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMA 448
KR+ A +V G+ + PG++ Y G+E E+VIV G V VA+M+ M
Sbjct: 93 KRVVADKVASESVLMGSDLYAPGVV-YARGVERGDEVVIVAPNGRVVGGGVAVMSWREMR 151
Query: 447 SCDHGVAAKLKRVI 406
G+A ++ + I
Sbjct: 152 RAGRGLAVRVTKPI 165
>UniRef50_Q4P5U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1217
Score = 39.5 bits (88), Expect = 0.10
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Frame = -2
Query: 386 PENGVSDRKLHRKKSSYXQG--KLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVKEG 213
P +++++ R+ +Y Q + DK ++ + WL+ ++ ++E ENG ++G
Sbjct: 257 PVERITEQEATRQNKAYMQPFVRADKTAAMDKEERRRWLHDMLSKFEEQENENGSDEEQG 316
Query: 212 SRKRTASTAN----AEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPE 63
++T++TA+ A P + QE R P D + PE
Sbjct: 317 DTQQTSATASTAREASSPQTAQSAAQETRVVLRTRTPSPPPSPDDESKSKSLPE 370
>UniRef50_Q98SB1 Cluster: Putative pseudouridylate synthase; n=1;
Guillardia theta|Rep: Putative pseudouridylate synthase
- Guillardia theta (Cryptomonas phi)
Length = 310
Score = 38.3 bits (85), Expect = 0.24
Identities = 21/115 (18%), Positives = 52/115 (45%)
Frame = -1
Query: 672 LRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGE 493
+ VI LE + K++ IK S +N + YG+++ +PGI++ ++ +I I+
Sbjct: 194 VENVIISLESIYRFLKKVIIKKSCINTIYYGSRIYVPGIIKISKSLKSGDKIKILDIDMN 253
Query: 492 AVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQXR 328
+ + T + + + V ++++ W G K+ + ++ + +
Sbjct: 254 FIGIGKLYFTHKSKNFVKLQIIPSI--VTSDKNSIKYTWKFGKKSIFRNLIFKTK 306
>UniRef50_Q0W3A3 Cluster: Putative 3\'-phosphoadenosine
5\'-phosphosulfate sulfotransferase; n=1; uncultured
methanogenic archaeon RC-I|Rep: Putative
3\'-phosphoadenosine 5\'-phosphosulfate sulfotransferase
- Uncultured methanogenic archaeon RC-I
Length = 627
Score = 37.9 bits (84), Expect = 0.32
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 627 KRIFIKDSAVNAVCYGAKVLL-PGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTM 451
K I D G+ +L PG++ ++ I++D E VIV G VA+ A MT + M
Sbjct: 123 KGFVIADKGAEKPLLGSSNMLGPGVVGCDESIQIDDE-VIVLVNGRPVAMGRAKMTGADM 181
Query: 450 ASCDHGVAAKLK 415
+ GVA K +
Sbjct: 182 KARKKGVAVKTR 193
>UniRef50_A2SQI0 Cluster: Phosphoadenosine phosphosulfate reductase;
n=3; Methanomicrobiales|Rep: Phosphoadenosine
phosphosulfate reductase - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 472
Score = 37.9 bits (84), Expect = 0.32
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = -1
Query: 642 LLIAHKR-IFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALM 466
L++ KR I + D A + G+ VL+PG+ IEV + +++ G+ VA+ A M
Sbjct: 118 LVVPTKRFIRVTDDAAGYIRDGSSVLMPGVTFVSPDIEVGDSVFVLSESGDCVAVGRAKM 177
Query: 465 TTSTMASCDHGVAAKLKRVIME-RDTYPRKW 376
+ G + +R D P W
Sbjct: 178 SYRETVGATRGQLVRTRRTQKPIVDAAPSTW 208
>UniRef50_UPI00015B5167 Cluster: PREDICTED: similar to
ENSANGP00000017739; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000017739 - Nasonia
vitripennis
Length = 2721
Score = 37.5 bits (83), Expect = 0.42
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = -2
Query: 305 PNENTPKEWLNSYVNYNVKKEPENGDGVKEGSRKRTASTANAEDPDVSIEVKQEXXXXXX 126
P+E+ KE +++ ++ +E + K+ + + S ++ +P VS + ++
Sbjct: 2361 PSESPDKELMSTV--FDSSEETSSESEKKDLTTEAAISETSSSEPTVSEKPDEKEEEPTA 2418
Query: 125 KRDSEAPAEADATMDTSESPETAEQPADD 39
SE P +DA TSE P TA A+D
Sbjct: 2419 TAASEEPTSSDAGSSTSEVPTTASTDAED 2447
>UniRef50_Q9UXT4 Cluster: Sun/NOL1/NOP nucleolar protein; n=4;
Thermococcaceae|Rep: Sun/NOL1/NOP nucleolar protein -
Pyrococcus abyssi
Length = 385
Score = 37.5 bits (83), Expect = 0.42
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -1
Query: 603 AVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAA 424
A +V GA + PG+LR + GI+ E+ I +G V + +A M M G+A
Sbjct: 98 AAESVYQGAMLYAPGVLRADKGIKEGDEVQIRDPRGLLVGIGIARMDYKEMIEATRGLAV 157
Query: 423 KL 418
++
Sbjct: 158 EV 159
>UniRef50_UPI0000E4ED42 Cluster: X-linked retinitis pigmentosa
GTPase regulator.; n=6; Euteleostomi|Rep: X-linked
retinitis pigmentosa GTPase regulator. - Danio rerio
Length = 1064
Score = 36.7 bits (81), Expect = 0.74
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -2
Query: 251 KKEPENGDGVKEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSE 72
++E ENGD K S++ + +ANA +V+ E +++ D E+ E D + E
Sbjct: 762 EEEEENGDSFKASSKEESGDSANAS--NVNSEEEEQKSKSEATDDLESEEEEDNEDNEEE 819
Query: 71 SPETAEQPADDS 36
ET+ D+S
Sbjct: 820 KSETSASTEDES 831
>UniRef50_A7D2R6 Cluster: Pseudouridylate synthase TruB domain
protein; n=1; Halorubrum lacusprofundi ATCC 49239|Rep:
Pseudouridylate synthase TruB domain protein -
Halorubrum lacusprofundi ATCC 49239
Length = 343
Score = 36.7 bits (81), Expect = 0.74
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Frame = -1
Query: 684 DETYLRRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGIL---------RYEDGIE 532
D+ +LR V++P E L+ + I SA V GA V PG++ +DG +
Sbjct: 242 DDAFLREVVRPAEDALVHLPSVTIAPSAARNVATGAPVYAPGVIDVDSVSEGGEGDDGDD 301
Query: 531 VDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIM 403
D++ +V A AV L + GV L+RV++
Sbjct: 302 TDRDPPLVACHTPDGA-AVCLGRLVGDPDAESGVVVSLERVLV 343
>UniRef50_A5KC57 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 893
Score = 36.3 bits (80), Expect = 0.97
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Frame = -2
Query: 401 NETRTPENGVSDRKLHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVK--KEPENGD 228
++T T N +R L ++K S G K + + ++N N+++ +E +NGD
Sbjct: 50 DDTATQNNVNDERALLKQKPSQEGGGGPKVQHYTSSFLQLYVNDEKNFDLYLIEEEDNGD 109
Query: 227 GVKEGSRKRTASTANAEDPDVS--IEVKQEXXXXXXKRDSEAP-----AEADATMDTSES 69
G G+ AS AED + +E + +EA AEA T +T+E+
Sbjct: 110 G---GATSVAASGGGAEDAEAVEVVEAAEAAETAETAETAEAAETAETAEAAETAETAEA 166
Query: 68 PETAEQPADDS 36
ETAE +S
Sbjct: 167 AETAEAAEAES 177
>UniRef50_A3CW62 Cluster: PUA domain containing protein; n=3;
Methanomicrobiales|Rep: PUA domain containing protein -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 166
Score = 36.3 bits (80), Expect = 0.97
Identities = 16/71 (22%), Positives = 37/71 (52%)
Frame = -1
Query: 624 RIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMAS 445
R+ +++ V G + ++ ++GI E+++VT +A AL++ M +
Sbjct: 86 RVAVQEDVAPFVADGKNAMAKHVVAADEGIRAGDEVLVVTGDDVLLATGAALLSGREMLA 145
Query: 444 CDHGVAAKLKR 412
++GVA K+++
Sbjct: 146 FNYGVAVKVRQ 156
>UniRef50_Q6BY19 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=6;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 447
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = -2
Query: 254 VKKEPENGDGVKEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTS 75
VKK+ + + S + +S+++ D D S E K+E DS + +E++A +
Sbjct: 22 VKKQESSSESSSSSSSESESSSSSESDSDSSDEEKEEEKKVSSDSDSSSDSESEAEVKKE 81
Query: 74 ESPETAEQPADDS 36
+ ++++ +D S
Sbjct: 82 KKDDSSDSDSDSS 94
Score = 33.1 bits (72), Expect = 9.1
Identities = 19/96 (19%), Positives = 45/96 (46%)
Frame = -2
Query: 350 KKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVKEGSRKRTASTANAEDP 171
KK + ++ K +E++ S + + + + ++ D KE +K ++ + ++ D
Sbjct: 13 KKQVKSKKQVKKQESSSESSSSSSSESESSSSSESDSDSSDEEKEEEKKVSSDSDSSSDS 72
Query: 170 DVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPE 63
+ EVK+E DS++ + + D E+P+
Sbjct: 73 ESEAEVKKEKKDDSSDSDSDSSSSDSDSSDEEEAPK 108
>UniRef50_Q5UX86 Cluster: Putative uncharacterized protein; n=1;
Haloarcula marismortui|Rep: Putative uncharacterized
protein - Haloarcula marismortui (Halobacterium
marismortui)
Length = 606
Score = 35.9 bits (79), Expect = 1.3
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -2
Query: 245 EPENGDGVKEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESP 66
E E D + TA TA A++P V+ E D+ A AEA+A DT++S
Sbjct: 454 ETEANDTANADADTSTADTAAADEP-TETAVEDESAATSDGADAPADAEAEAMADTADSD 512
Query: 65 ETAEQPADDSVR 30
E+ + +++R
Sbjct: 513 ESPDDDPLEALR 524
>UniRef50_Q17GE7 Cluster: Tripartite motif protein trim2,3; n=2;
Culicidae|Rep: Tripartite motif protein trim2,3 - Aedes
aegypti (Yellowfever mosquito)
Length = 1293
Score = 35.5 bits (78), Expect = 1.7
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -2
Query: 398 ETRTPENGVSDRKLHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPEN---GD 228
ETR P S HR S+Y + + KYG P+ ++ L S +V+ EPEN
Sbjct: 732 ETR-PSGYSSPTSYHRSTSTYDRDESPKYGSPSSSSA---LRSRTTAHVEPEPENKYGSS 787
Query: 227 GVKEGSRKRTASTANAEDPDVS 162
G ++ STA D D +
Sbjct: 788 GYTSRFLNKSKSTAVVADDDAT 809
>UniRef50_Q9LJM0 Cluster: Gb|AAD50048.1; n=6; Arabidopsis
thaliana|Rep: Gb|AAD50048.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 379
Score = 35.1 bits (77), Expect = 2.2
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 383 ENGVSDRKLHRKKSSYXQGKLDKYGKPNENTPKEWLNS 270
ENGV D K ++KS+ G LD + + E EWLN+
Sbjct: 101 ENGVDDGKTGKEKSNNGVGHLDSHAQLGEQDQIEWLNN 138
>UniRef50_A2FDY5 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1574
Score = 34.7 bits (76), Expect = 3.0
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Frame = -2
Query: 350 KKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVK--EGSRKRTASTANAE 177
+KS + +K +P E TPK+ N K EN + K G K + N E
Sbjct: 501 EKSPLTPKQQEKTSQPEEETPKQQENPQNEEEKPKNEENQEETKSDNGEVKSDKNNDNEE 560
Query: 176 DPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQPADDS 36
+ + + ++E K D E + + S+S + E+P D+
Sbjct: 561 EENQNNNEEEEQKDKEPKSDKPQDEENKSDNEKSKSDKLQEEPKSDN 607
>UniRef50_Q8PYH9 Cluster: Conserved protein; n=3;
Methanosarcinaceae|Rep: Conserved protein -
Methanosarcina mazei (Methanosarcina frisia)
Length = 634
Score = 34.7 bits (76), Expect = 3.0
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 582 GAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAK 421
GA +L PG+L + I+ + E+V++ GE V A M M G A K
Sbjct: 146 GASILAPGVLDADPEIKKEDEVVVLNPAGEVVCCGRARMAGKEMIEEKRGNAVK 199
>UniRef50_A3H7P0 Cluster: Fmu; n=1; Caldivirga maquilingensis
IC-167|Rep: Fmu - Caldivirga maquilingensis IC-167
Length = 398
Score = 34.3 bits (75), Expect = 3.9
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 633 AHKRIFIKDS-AVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTS 457
A +R + D A +V G+ + PG+L + I E+ +V+ G+ VAL VA + S
Sbjct: 99 ASRRYVVADKYASESVYLGSNLYGPGVLYMPNDIHAGDEVNVVSPNGDVVALGVAKINAS 158
Query: 456 TMASCDHGVAAK 421
G+ +
Sbjct: 159 EFRRGFRGIVVE 170
>UniRef50_A2DQV3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 673
Score = 33.9 bits (74), Expect = 5.2
Identities = 30/117 (25%), Positives = 46/117 (39%)
Frame = -2
Query: 398 ETRTPENGVSDRKLHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVK 219
E + PE V + + + K + KP+E P E + NV+++ EN + K
Sbjct: 141 EEQKPEEKVEENIGNTESVKEEAEKPTEEAKPDEEQPAEEVKP--EENVEEQKENAEEQK 198
Query: 218 EGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQP 48
E P+ E KQE K ++E + T T E P+ EQP
Sbjct: 199 SEQNPTEEEPKQEEQPET--EQKQEENTEEQKENTEEQKSEENT--TEEQPKQEEQP 251
>UniRef50_Q9W3Z5 Cluster: CG3918-PA; n=1; Drosophila
melanogaster|Rep: CG3918-PA - Drosophila melanogaster
(Fruit fly)
Length = 321
Score = 33.1 bits (72), Expect = 9.1
Identities = 25/109 (22%), Positives = 46/109 (42%)
Frame = -2
Query: 362 KLHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVKEGSRKRTASTAN 183
K H KK S K + N+ E + K P +G K+ R+R++ST++
Sbjct: 153 KKHGKKRSRKHKKTTNTNNSSSNSSSELAKTKTG----KRPSSGSTNKKSKRRRSSSTSS 208
Query: 182 AEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQPADDS 36
+ D S S + + D++ D+S S +++E + D+
Sbjct: 209 S---DSSSSSSSSSSSSSSTSSSSSSSSDDSSDDSSTSSDSSESDSSDN 254
>UniRef50_Q8SZB7 Cluster: RE07960p; n=2; Sophophora|Rep: RE07960p -
Drosophila melanogaster (Fruit fly)
Length = 224
Score = 33.1 bits (72), Expect = 9.1
Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = -1
Query: 618 FIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCD 439
F+ AVNA K LLP IL + DGIE D E +V+ + AV AVA +
Sbjct: 17 FLGHEAVNASWEAVK-LLPEILTH-DGIEYDLEKRLVSVEYGAVDEAVAEIWKRQPYLVI 74
Query: 438 H-GVAAKLKRVIMERDTYPRKWGLGPKASQK 349
H GV+ K V +E+ Y K+ +K
Sbjct: 75 HVGVSGVAKCVYIEKLAYNHKFRRADNCDKK 105
>UniRef50_Q7RKK5 Cluster: Putative uncharacterized protein PY02896;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY02896 - Plasmodium yoelii yoelii
Length = 1549
Score = 33.1 bits (72), Expect = 9.1
Identities = 18/86 (20%), Positives = 41/86 (47%)
Frame = -2
Query: 401 NETRTPENGVSDRKLHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGV 222
+ET++ E ++++K++ KKS+ K L+SY + +KK+ + +
Sbjct: 229 SETKSNEKKMNEKKMNEKKSNDSDDNNSSESTSYNLKKKNRLSSYDSETLKKQSKKNKNL 288
Query: 221 KEGSRKRTASTANAEDPDVSIEVKQE 144
E S K+ + + + +++ K E
Sbjct: 289 SENSNKKEGNKKSVLNNKKNVKGKNE 314
>UniRef50_Q22GD7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1070
Score = 33.1 bits (72), Expect = 9.1
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -2
Query: 302 NENTPKEWLNSYVN-YNVKKEPENGDGVKEGSRKRTASTANAEDPDVSIEVKQ 147
+++ K+ NSY+N YN+KK N + + S K +T++ ++ D I KQ
Sbjct: 177 HQDQDKKRTNSYLNTYNIKKSQNNNTQMNKQSSKNQNNTSDVQNYDDKITQKQ 229
>UniRef50_Q2NF46 Cluster: Predicted RNA-binding protein; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: Predicted
RNA-binding protein - Methanosphaera stadtmanae (strain
DSM 3091)
Length = 159
Score = 33.1 bits (72), Expect = 9.1
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -1
Query: 660 IKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIV-TTKGEAVA 484
+K + L I K + A+N V GA ++ PGI+ + I + IVI+ T + +A
Sbjct: 65 LKAVLSLEITEKYATVDMGAINFVIKGADIMSPGIVDADKTIVAGETIVIIEETHKKPIA 124
Query: 483 LAVALMTTSTMASCDHGVA 427
+ +L++ M G A
Sbjct: 125 IGTSLISGEEMIENSKGKA 143
>UniRef50_A7D1S4 Cluster: PUA domain containing protein; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: PUA domain
containing protein - Halorubrum lacusprofundi ATCC 49239
Length = 600
Score = 33.1 bits (72), Expect = 9.1
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = -1
Query: 573 VLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRV 409
VL PG++ +D I V E+VI K A A+ A M+ M GVA++++ V
Sbjct: 545 VLAPGVVDADDDIRVGDEVVIEGPK--AFAIGRAEMSGPEMVESTRGVASEVRHV 597
>UniRef50_Q09280 Cluster: Uncharacterized protein C45G9.8; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
C45G9.8 - Caenorhabditis elegans
Length = 465
Score = 33.1 bits (72), Expect = 9.1
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = -3
Query: 424 ETEACHNGTRHVPQKMGSRTESFTEKNPHTXKGNLTNMANQMRTHQKNG*TVTSTIMLRK 245
E T +P + ++S TEK T +T +T +++ TVT+T +
Sbjct: 90 ECATMSTSTHVMPNSSSTISKSATEKKTKTGSKKVTRSKKSKKTKRRSSTTVTTTTI--S 147
Query: 244 NRRTVTVSR-KAAESERQAQLTRKIP 170
N + VT + K ++ +R+ + RK P
Sbjct: 148 NSKPVTPDKDKDSKDQRKQRTKRKDP 173
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,388,747
Number of Sequences: 1657284
Number of extensions: 12457686
Number of successful extensions: 39628
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 37519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39524
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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