Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K11
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   2.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.6  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   6.2  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   8.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   8.2  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 442 RSWCSRETEACHNGT 398
           RSW +RE++ C+N +
Sbjct: 353 RSWVTRESQICNNSS 367


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
 Frame = -2

Query: 341 SYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPE-----NGDGVKEGSRKRTASTANAE 177
           ++  G + + GKP E T  +  +   N N+K + E     + D  +  S  + AS +   
Sbjct: 69  NFVAGGIQQAGKPKEETDDKDDDESDNENIKSQKEFPNSSSSDDERPNSIHQRASFSLNT 128

Query: 176 DPDVS 162
           D D++
Sbjct: 129 DGDIA 133


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = -3

Query: 430 SRETEACHNGTRHVPQKMGSRTESFTEKNPHTXKGNLTN----MANQMRTHQKNG 278
           +R+ +   NG R    K     ++  ++N +   GN  N      N+   +++NG
Sbjct: 463 NRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNGNKQNDNKQNGNRQNDNKRNG 517


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 404 WNETRTPENGVSDRKLHRKK 345
           W+  R P    S   +HRKK
Sbjct: 46  WSRPREPAQTTSKAGIHRKK 65


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 404 WNETRTPENGVSDRKLHRKK 345
           W+  R P    S   +HRKK
Sbjct: 168 WSRPREPAQTTSKAGIHRKK 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,741
Number of Sequences: 438
Number of extensions: 3724
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)