Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K10
(827 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 130 3e-29
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 111 2e-23
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 85 3e-15
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 77 7e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 72 2e-11
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 62 1e-08
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 57 6e-07
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 56 8e-07
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 52 2e-05
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 52 2e-05
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 46 9e-04
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 46 0.002
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 44 0.005
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 44 0.006
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 40 0.058
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 39 0.13
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 38 0.23
UniRef50_Q6M9P8 Cluster: Putative cytochrome-c oxidase fixO chai... 38 0.31
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 37 0.71
UniRef50_Q6D5E6 Cluster: Type III secretion protein; n=4; Entero... 36 1.6
UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.9
UniRef50_Q5CF53 Cluster: Putative uncharacterized protein; n=2; ... 34 3.8
UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 1... 34 5.0
UniRef50_Q07U65 Cluster: SNF2-related protein; n=2; Proteobacter... 33 6.6
UniRef50_Q62FX5 Cluster: Oxidoreductase, FAD-binding, putative; ... 33 8.7
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 130 bits (315), Expect = 3e-29
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRA 403
TQSAF RLD +FGSWKTPSK+KKNFNLPQPKMANTDL+RLLKS+EIR+VLRAP KRV+RA
Sbjct: 118 TQSAFERLDAIFGSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVRA 177
Query: 402 TRKLNPLTNNQ 370
TRKLNPLTN +
Sbjct: 178 TRKLNPLTNTK 188
Score = 95.5 bits (227), Expect = 1e-18
Identities = 65/152 (42%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Frame = -1
Query: 632 DLLKLAPGGHFGRFVI*LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSL 453
+LL LAPGGH GRF+I L G + +++ P P + + S L
Sbjct: 101 NLLHLAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKKNFNLPQ---PKMANTDLSRL 157
Query: 452 MRSGR-SSVLPTNA*SVLHAN*TRSLT----TKAMLKLNPYAAVLKRKAILELRRRKNLK 288
++S VL V+ A TR L TKAMLKLNPYAAVLK+KA+L+ +RKN +
Sbjct: 158 LKSEEIRRVLRAPIKRVVRA--TRKLNPLTNTKAMLKLNPYAAVLKKKAVLDQVKRKNKR 215
Query: 287 ALADAEKSGLKLSKRNPAMKAEKLRERRRKNI 192
AL AEK G+KL +PA+KA KL+E+R K+I
Sbjct: 216 ALEVAEKRGIKLPDDDPAVKALKLKEKRAKSI 247
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 111 bits (268), Expect = 2e-23
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRA 403
T+SAF RL+ LFG+WK PS KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+
Sbjct: 256 TESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRS 315
Query: 402 TRKLNPLTN 376
R+LNPLTN
Sbjct: 316 VRRLNPLTN 324
Score = 64.9 bits (151), Expect = 2e-09
Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Frame = -1
Query: 632 DLLKLAPGGHFGRFVI*LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSL 453
+LLKLAPGGH GRFVI A L G + ++ P P + + S L
Sbjct: 239 NLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRL 295
Query: 452 MRSGR-SSVLPTNA*SVLHA-N*TRSLTT-KAMLKLNPYAAVLKRKAILELRRRKNLKAL 282
++S VL V + LT + ++KLNPYA VLKR+A L +R K L
Sbjct: 296 LKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVL 355
Query: 281 ADAEKSGLKLSKRNPAMKAEKLRERRRK 198
A A+K ++L+K + A A K R K
Sbjct: 356 AKAKKQNVELAKSHFANVATKAAANRAK 383
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 84.6 bits (200), Expect = 3e-15
Identities = 41/97 (42%), Positives = 59/97 (60%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRA 403
T+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R
Sbjct: 253 TESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRR 312
Query: 402 TRKLNPLTNNQGDAETQSLRGRAEEESYLRAAQKEEL 292
K NPL N + + + LR A+ +L
Sbjct: 313 VLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 44.8 bits (101), Expect = 0.003
Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Frame = -1
Query: 632 DLLKLAPGGHFGRFVI*LSPHSAGLTPYSGHGRHHQNKRRTSTCP-NRRWPTLTSHVFSS 456
++LKLAPGGH GRF I L G R + + P ++ T S + S
Sbjct: 236 NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKS 295
Query: 455 --LMRSGRSSVLPTNA*SVLHAN*TRSLTTKAMLKLNPYAAVLKRKAILELRRRKNLKA- 285
+ R+ R+ + VL N ++L + MLKLNPYA ++R IL R L+
Sbjct: 296 PEIQRALRAPRKKIHR-RVLKKNPLKNL--RIMLKLNPYAKTMRRNTILRQARNHKLRVD 352
Query: 284 LADAEKSGLKLSKRNPAMKAEK 219
A A + L+ A A K
Sbjct: 353 KAAAAAAALQAKSDEKAAVAGK 374
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 76.6 bits (180), Expect = 7e-13
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = -3
Query: 573 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 394
AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++ L+AP K++ R K
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKIHRRVLK 154
Query: 393 LNPLTN 376
NPL N
Sbjct: 155 KNPLKN 160
Score = 33.5 bits (73), Expect = 6.6
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 365 MLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEK 219
MLKLNPYA ++R I LR+ KN K D + L+ + +K
Sbjct: 164 MLKLNPYAKTMRRNTI--LRQAKNHKLRMDKSAAALEAKSEEKGVPGKK 210
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 573 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRATR 397
AF +LD L+G+W + K N+NLP KM NTDL+R+LK I++ LRAP KR+ R +
Sbjct: 173 AFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVLK 232
Query: 396 KLNPLTN 376
K NPL N
Sbjct: 233 KKNPLKN 239
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR- 406
T+SAF +LD +FG+ + S KK + P MA TDLTRL+ SDEI+ L AP IR
Sbjct: 256 TKSAFEKLDSIFGTSTSKSASKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIRA 315
Query: 405 -ATRKLNPLTN 376
A K NPL N
Sbjct: 316 HAPLKRNPLKN 326
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 57.6 bits (133), Expect = 4e-07
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLR-----APNK 418
T SAFG LD ++GS PS KK+F LP M DL++++ S +I+KVLR A +K
Sbjct: 235 TSSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKIINSSDIQKVLRPVRGGAVSK 294
Query: 417 RVIRATRKLNPLTNNQ 370
R + +K NPL N Q
Sbjct: 295 RGV--VQKKNPLKNFQ 308
Score = 35.5 bits (78), Expect = 1.6
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Frame = -1
Query: 632 DLLKLAPGGHFGRFVI*LSPHSAGLTPYSGHGRHHQNKRRTSTCPN--RRWPTLTSHVFS 459
+LL+LAPGGH GRF++ S L G ++ P+ + P L+ + S
Sbjct: 218 NLLQLAPGGHLGRFIVWTSSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKIINS 277
Query: 458 S----LMRSGRSSVLPTNA*SVLHAN*TRSLTTKAMLKLNPYAAVLKRKAI 318
S ++R R + V N ++ + L+LNPYAA ++ +
Sbjct: 278 SDIQKVLRPVRGGAVSKRG-VVQKKNPLKNF--QVQLRLNPYAATFSKEKL 325
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 56.8 bits (131), Expect = 6e-07
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIR 406
TQSAF LD LFG+++ S K + L +P + N DL R++ S++++ KV A +V+
Sbjct: 255 TQSAFAHLDKLFGTYRYASVLKDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKVLH 314
Query: 405 ATRKLNPLTNNQ 370
+K NPL N +
Sbjct: 315 DVQKKNPLKNTK 326
Score = 39.1 bits (87), Expect = 0.13
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = -1
Query: 632 DLLKLAPGGHFGRFVI*LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSL 453
+LL+LAPGG GRFVI A L G R+ + P LT+ + +
Sbjct: 238 NLLQLAPGGQLGRFVIWTQSAFAHLDKLFGTYRYASVLKDGYQLLR---PLLTNPDLARI 294
Query: 452 MRSG--RSSVLPTNA*SVLHAN*TRS--LTTKAMLKLNPYAAVLKRKAILELRRRKNLKA 285
+ S + V P VLH ++ TKAM +LNPYA + A+ ++
Sbjct: 295 INSNQVQEKVQPAKTTKVLHDVQKKNPLKNTKAMDRLNPYAKKQRAAAVAAIK------- 347
Query: 284 LADAEKSGLKLSKRNPAMK 228
A G K K+N A+K
Sbjct: 348 ---ANTKGTKKIKKNKALK 363
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 56.4 bits (130), Expect = 8e-07
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIR 406
TQSAF LD LFG+++ S K + L +P + N DL R++ S++++ KV A V+
Sbjct: 101 TQSAFANLDKLFGTYRYSSILKDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTVLH 160
Query: 405 ATRKLNPLTNNQ 370
+K NPL N++
Sbjct: 161 EVQKKNPLKNSK 172
Score = 35.5 bits (78), Expect = 1.6
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Frame = -1
Query: 632 DLLKLAPGGHFGRFVI*LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSL 453
+LL+LAPGG GRFVI A L G R+ + P LT+ + +
Sbjct: 84 NLLQLAPGGQLGRFVIWTQSAFANLDKLFGTYRYSSILKDGYQLLR---PLLTNPDLARI 140
Query: 452 MRSG--RSSVLPTNA*SVLHAN*TRS--LTTKAMLKLNPYAAVLKRKAILELRRRKNLKA 285
+ S + V +VLH ++ +KA+ +LNPYA ++R A
Sbjct: 141 INSNQVQEKVQAAKQTTVLHEVQKKNPLKNSKALDRLNPYAK----------KQRAAATA 190
Query: 284 LADAEKSGLKLSKRNPAMKAE 222
A +G K K+N A+K +
Sbjct: 191 AVKAHTTGTKKIKKNKALKKQ 211
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = -3
Query: 612 GRSFWTFRHLTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVL 433
G +F T+ A RL ++GS+ S K + LP+P M N D+TR++ S E++ VL
Sbjct: 246 GGTFGRLTIFTKGAIKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRIINSTEVQSVL 305
Query: 432 R 430
R
Sbjct: 306 R 306
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI-- 409
+ SAF LD ++G+ PS KK+F LP ++ D+ RL+ S E++ V+RA +
Sbjct: 258 SSSAFKALDNIYGTTTAPSALKKDFLLPSNVVSQADIGRLINSSELQSVIRAAKGSALTK 317
Query: 408 RA-TRKLNPLTNNQ 370
RA +K NPL N Q
Sbjct: 318 RAGVQKKNPLLNKQ 331
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 46.4 bits (105), Expect = 9e-04
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA---PNKRV 412
T+ A+ +LD L+G+ + K + P P + NTDL+R++ S ++ VL+A +K++
Sbjct: 253 TEGAYKKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRIIHSPTVQSVLKARGKQSKKI 312
Query: 411 IRATRKL---NPLT-NNQGDAETQSLRGRAEEESYLRAAQKEEL 292
I R L + L+ NN Q LR + E+ A + ++
Sbjct: 313 INVRRNLLIASKLSQNNARIKRLQKLRKESGEDKKKEAKKSRKV 356
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 45.6 bits (103), Expect = 0.002
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRA 403
++ AF +LD ++G KKN+ LP+P + N D+ R++ SD+++ L +
Sbjct: 253 SEDAFKKLDVIYGKTFQKYVTKKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKR 312
Query: 402 TRKLNPLTN 376
T+ N LTN
Sbjct: 313 TQNKNSLTN 321
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = -3
Query: 492 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTN 376
KM N+DL+R+LK EI++ L+AP K + K NPLTN
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTN 41
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI-R 406
T+SAF +L+ +FG+ K ++ K F + +MA D+ R++ + E K+LRA K V+ +
Sbjct: 255 TESAFKKLNTIFGTQKKMAQGKSGFRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVLPK 312
Query: 405 ATRKLNPLTN 376
++ NPL N
Sbjct: 313 VPKRANPLKN 322
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 40.3 bits (90), Expect = 0.058
Identities = 21/71 (29%), Positives = 41/71 (57%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRA 403
T+SAF LD ++ + K+N+ LP+ + TD+ R+L+SD ++K P + +
Sbjct: 240 TKSAFASLDDVYAA-------KQNYTLPRSCITQTDIERILQSDAVQKTF-VPKRDPLVI 291
Query: 402 TRKLNPLTNNQ 370
RK++P ++ +
Sbjct: 292 ERKVDPFSSKE 302
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 39.1 bits (87), Expect = 0.13
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -1
Query: 632 DLLKLAPGGHFGRFVI*LSPHSAGL-TPYSGHGRHHQNKRRTSTCPNRRW 486
+LLKLAPGGH GRFVI L + Y + + +R + CP ++W
Sbjct: 100 NLLKLAPGGHLGRFVIWTKSSFEKLDSIYRSFEKKLRRRRMGTCCPVKKW 149
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 38.3 bits (85), Expect = 0.23
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 424
T+SAF +LD +FG + ++ F LP + + DL L SD ++ +L P
Sbjct: 249 TESAFEKLDKIFGGVEREAELTPGFKLPNRIVTHDDLEELFYSDAVQAILDEP 301
>UniRef50_Q6M9P8 Cluster: Putative cytochrome-c oxidase fixO chain;
n=1; Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative cytochrome-c oxidase fixO chain -
Protochlamydia amoebophila (strain UWE25)
Length = 415
Score = 37.9 bits (84), Expect = 0.31
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = -3
Query: 519 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNQGDAETQSLRG 340
K+N++L K +N RL+ S + K + N ++ T +L L QG+A+ Q+ +
Sbjct: 75 KQNYSLLAFKESNN--LRLVTSQGLEKYITKVNDSTLKLTSRLLLLREPQGEAKKQAEQL 132
Query: 339 RAEEESYLRAAQKEE 295
A ++S + AQKEE
Sbjct: 133 LASQQSTTKIAQKEE 147
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 36.7 bits (81), Expect = 0.71
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Frame = -3
Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IR 406
T+SAF LD ++ S KK F+LP+ M N D+ ++ SD ++ VL + V +
Sbjct: 250 TESAFKALDGIYES-------KKRFSLPRSIMTNADIEAVITSDAVQSVLNEKKEVVPLP 302
Query: 405 ATRKLNPLTNNQGDAETQSLRGRAEEESYLRAAQKEELEGSC*CREEWIEAV*AKP 238
R L+ + ++L+ AE LRAAQ+ + + + EAV A+P
Sbjct: 303 KCRCCKKLSVGACEDWQKALKEVAE----LRAAQEAKRTSPEVVKAVFAEAVAAQP 354
>UniRef50_Q6D5E6 Cluster: Type III secretion protein; n=4;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 145
Score = 35.5 bits (78), Expect = 1.6
Identities = 33/96 (34%), Positives = 46/96 (47%)
Frame = -3
Query: 657 WGS*MLTS*PPEAGSGRSFWTFRHLTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANT 478
W S L+S P AGSG S W L + + G L+ +F S + Q N P+ +
Sbjct: 57 WFSAALSSAPMTAGSGNSQW-LGALAEKSQG-LNGVFKSAERDVSQAMRSNNPKDVL--- 111
Query: 477 DLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNQ 370
D TR L S + +L A K V ++ + L LTN Q
Sbjct: 112 DATRTLSSFYLESLLSA--KLVAKSVQSLEKLTNLQ 145
>UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 987
Score = 34.7 bits (76), Expect = 2.9
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -1
Query: 335 LKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERR 204
+K K+ ++ ++K KALA E+ +KL KAEKL ERR
Sbjct: 410 IKSKSFRKVEKKKKEKALAKREEELMKLDPEFAKHKAEKLEERR 453
>UniRef50_Q5CF53 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 1055
Score = 34.3 bits (75), Expect = 3.8
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = -3
Query: 543 SWKTPSKQKKNFNLPQPKMANTDLTRLL--KSDEIRKVLRAPNK-RVIRATRKLNPLTNN 373
S K PSK KK + + L + KS++IR V+++ K V TRK+N
Sbjct: 574 SIKAPSKVKKKSEKKEEALNKLRLKAEISEKSEKIRGVIKSERKSNVSERTRKMNERKEK 633
Query: 372 QGDAETQSLRGRAEEESYLRAA 307
Q + + R R EEE R A
Sbjct: 634 QKACKERERREREEEERRRRDA 655
>UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 131;
n=26; Amniota|Rep: Coiled-coil domain-containing protein
131 - Homo sapiens (Human)
Length = 1989
Score = 33.9 bits (74), Expect = 5.0
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Frame = -3
Query: 558 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 385
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 762 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 821
Query: 384 LTNNQGDAETQSLRGR---AEEESYLRAAQKEE 295
+T DAE++ + R ++ES L+ ++E
Sbjct: 822 VTKQVTDAESKLKKHRILLMKDESVLKNLVQQE 854
>UniRef50_Q07U65 Cluster: SNF2-related protein; n=2;
Proteobacteria|Rep: SNF2-related protein -
Rhodopseudomonas palustris (strain BisA53)
Length = 963
Score = 33.5 bits (73), Expect = 6.6
Identities = 26/65 (40%), Positives = 34/65 (52%)
Frame = -1
Query: 395 N*TRSLTTKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKL 216
N +R+ + +KL YA L+ RR K LKA ADA K L+ S+ P AEK+
Sbjct: 849 NQSRNWLDEETVKLEAYAEDLESA---NNRRAKELKAEADAAKRALRGSQSIPL--AEKI 903
Query: 215 RERRR 201
E RR
Sbjct: 904 EEERR 908
>UniRef50_Q62FX5 Cluster: Oxidoreductase, FAD-binding, putative;
n=25; Proteobacteria|Rep: Oxidoreductase, FAD-binding,
putative - Burkholderia mallei (Pseudomonas mallei)
Length = 553
Score = 33.1 bits (72), Expect = 8.7
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 600 WTFRHLTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLK 457
+ + H TQ++FGR + W S+ N+N P +AN L LLK
Sbjct: 240 YDWSHFTQASFGRFLQTYWDWF--SRNDANWNAADPALANGGLFTLLK 285
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,180,537
Number of Sequences: 1657284
Number of extensions: 10867553
Number of successful extensions: 28132
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28103
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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