Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K10
         (827 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0578 + 4295386-4296489,4297394-4297507                           77   2e-14
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272...    74   2e-13
09_06_0015 - 20234231-20234344,20234846-20234902,20234968-202351...    30   2.6  
02_04_0073 - 19471254-19472681                                         29   6.0  

>07_01_0578 + 4295386-4296489,4297394-4297507
          Length = 405

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 37/94 (39%), Positives = 59/94 (62%)
 Frame = -3

Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRA 403
           T+SAF +L+ ++G+++ PS +KK F LP+PKMAN DL R++ SDE++ V++  NK V R 
Sbjct: 258 TESAFKKLEEVYGTFEAPSLKKKGFILPRPKMANADLGRIINSDEVQSVVKPLNKEVKRR 317

Query: 402 TRKLNPLTNNQGDAETQSLRGRAEEESYLRAAQK 301
            ++ NPL N     +     G A + + L  A +
Sbjct: 318 EKRKNPLKNVAAVLKLNPYFGTARKMATLAEAAR 351



 Score = 37.9 bits (84), Expect = 0.010
 Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
 Frame = -1

Query: 632 DLLKLAPGGHFGRFVI*LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSL 453
           +LL LAPGGH GRFVI        L    G       K++    P    P + +     +
Sbjct: 241 NLLDLAPGGHLGRFVIWTESAFKKLEEVYGTFEAPSLKKKGFILPR---PKMANADLGRI 297

Query: 452 MRSG--RSSVLPTNA*SVLHAN*TRSL-TTKAMLKLNPYAAVLKRKAIL-ELRRRKNLKA 285
           + S   +S V P N            L    A+LKLNPY    ++ A L E  R K  K 
Sbjct: 298 INSDEVQSVVKPLNKEVKRREKRKNPLKNVAAVLKLNPYFGTARKMATLAEAARIKARKE 357

Query: 284 LADAEKSGL 258
             D++++ L
Sbjct: 358 KLDSKRTKL 366


>03_06_0298 -
           32925441-32925998,32926371-32926730,32927161-32927230,
           32927642-32927797,32929181-32929242,32929339-32929352,
           32930421-32930520,32931474-32932574
          Length = 806

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 37/94 (39%), Positives = 56/94 (59%)
 Frame = -3

Query: 582 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRA 403
           T+ AF +LD ++G + TP+ +KK F LP+PKMAN DL+RL+ SDE++ V++  NK V   
Sbjct: 257 TECAFKKLDEVYGGFDTPALKKKGFVLPRPKMANADLSRLINSDEVQSVVKPINKEVKLR 316

Query: 402 TRKLNPLTNNQGDAETQSLRGRAEEESYLRAAQK 301
             + NPL N     +     G A + + L  A +
Sbjct: 317 EARRNPLKNVAAVLKLNPYFGTARKMAALAEAAR 350



 Score = 38.3 bits (85), Expect = 0.007
 Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 4/142 (2%)
 Frame = -1

Query: 632 DLLKLAPGGHFGRFVI*LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSL 453
           +LL LAPGGH GRFVI        L    G       K++    P    P + +   S L
Sbjct: 240 NLLDLAPGGHLGRFVIWTECAFKKLDEVYGGFDTPALKKKGFVLPR---PKMANADLSRL 296

Query: 452 MRSG--RSSVLPTNA*SVLHAN*TRSL-TTKAMLKLNPYAAVLKRKAIL-ELRRRKNLKA 285
           + S   +S V P N    L       L    A+LKLNPY    ++ A L E  R K    
Sbjct: 297 INSDEVQSVVKPINKEVKLREARRNPLKNVAAVLKLNPYFGTARKMAALAEAARVKARTE 356

Query: 284 LADAEKSGLKLSKRNPAMKAEK 219
             D++++ L   + +    A K
Sbjct: 357 KLDSKRTKLSPEESSKIKAAGK 378


>09_06_0015 -
           20234231-20234344,20234846-20234902,20234968-20235111,
           20235581-20235745,20235817-20236005,20236086-20236326,
           20236412-20236512,20236704-20237241,20238101-20238132,
           20238677-20238760
          Length = 554

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
 Frame = -3

Query: 543 SWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNQGD 364
           S ++PS      + P P +    L R  + DE    L+A  ++ ++A ++       +  
Sbjct: 367 SHRSPSLYPHVEHAPSPALTEQRLLREQQDDEYLASLQADQEKELKALQEAELRRLEETA 426

Query: 363 AETQSLRGRAEEESYLRAAQ--KEELEGS 283
           A   +L  + +EE   R  Q  +EELE S
Sbjct: 427 AREAALEKQKQEEEERRKKQLEEEELESS 455


>02_04_0073 - 19471254-19472681
          Length = 475

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -1

Query: 611 GGHFGRFVI*LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMR 447
           GG  G  +   +P   G +P S HG HH++++   T  N +   L   V   ++R
Sbjct: 9   GGGGGGGLPMTAPRPRGASPLSSHGHHHRSRKIHRTFNNVKITVLCGLVTILVLR 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,271,702
Number of Sequences: 37544
Number of extensions: 318258
Number of successful extensions: 772
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)