Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K08
(796 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 125 4e-29
03_01_0547 + 4093196-4093657,4094267-4095148 125 4e-29
03_01_0544 + 4082528-4082989,4083585-4084466 125 4e-29
03_01_0543 + 4076981-4077442,4078145-4079026 125 4e-29
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 40 0.002
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 40 0.002
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 40 0.002
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 37 0.021
05_06_0009 - 24829482-24829711,24830164-24830435,24830734-248309... 33 0.26
11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903 29 5.6
05_01_0340 - 2677082-2678266 28 9.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 125 bits (302), Expect = 4e-29
Identities = 59/108 (54%), Positives = 75/108 (69%)
Frame = -3
Query: 791 ITTEVKSVGMHXXSSPRSCTWRQCRFQRKERVRQGLRRGYVAGDSKNNPPKGAADFTAQV 612
+TTEVKSV MH + + F K + L+RGYVA +SK++P K AA FT+QV
Sbjct: 273 LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQV 332
Query: 611 IVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSN*SQPK 468
I++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK +PK
Sbjct: 333 IIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPK 380
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = -1
Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 293
PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+ G K
Sbjct: 379 PKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAK 438
Query: 292 VN*SCRK 272
V + K
Sbjct: 439 VTKAAAK 445
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 125 bits (302), Expect = 4e-29
Identities = 59/108 (54%), Positives = 75/108 (69%)
Frame = -3
Query: 791 ITTEVKSVGMHXXSSPRSCTWRQCRFQRKERVRQGLRRGYVAGDSKNNPPKGAADFTAQV 612
+TTEVKSV MH + + F K + L+RGYVA +SK++P K AA FT+QV
Sbjct: 273 LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQV 332
Query: 611 IVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSN*SQPK 468
I++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK +PK
Sbjct: 333 IIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPK 380
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = -1
Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 293
PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+ G K
Sbjct: 379 PKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAK 438
Query: 292 VN*SCRK 272
V + K
Sbjct: 439 VTKAAAK 445
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 125 bits (302), Expect = 4e-29
Identities = 59/108 (54%), Positives = 75/108 (69%)
Frame = -3
Query: 791 ITTEVKSVGMHXXSSPRSCTWRQCRFQRKERVRQGLRRGYVAGDSKNNPPKGAADFTAQV 612
+TTEVKSV MH + + F K + L+RGYVA +SK++P K AA FT+QV
Sbjct: 273 LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQV 332
Query: 611 IVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSN*SQPK 468
I++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK +PK
Sbjct: 333 IIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPK 380
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = -1
Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 293
PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+ G K
Sbjct: 379 PKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAK 438
Query: 292 VN*SCRK 272
V + K
Sbjct: 439 VTKAAAK 445
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 125 bits (302), Expect = 4e-29
Identities = 59/108 (54%), Positives = 75/108 (69%)
Frame = -3
Query: 791 ITTEVKSVGMHXXSSPRSCTWRQCRFQRKERVRQGLRRGYVAGDSKNNPPKGAADFTAQV 612
+TTEVKSV MH + + F K + L+RGYVA +SK++P K AA FT+QV
Sbjct: 273 LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQV 332
Query: 611 IVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSN*SQPK 468
I++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK +PK
Sbjct: 333 IIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPK 380
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = -1
Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 293
PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+ G K
Sbjct: 379 PKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAK 438
Query: 292 VN*SCRK 272
V + K
Sbjct: 439 VTKAAAK 445
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 320
P+ + S A++ + K +CVE F LGR +R T+AVG++ V
Sbjct: 600 PRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLRSQGNTIAVGIVSRV 650
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 329
P+ +KS A+V + P+CV+ F + LGR +R T+AVGV+
Sbjct: 624 PRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 329
P+ +KS A+V + P+CV+ F + LGR +R T+AVGV+
Sbjct: 624 PRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 36.7 bits (81), Expect = 0.021
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -1
Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 362
P +K+G + + + +C+E+F +FP LGRF +R
Sbjct: 379 PLFVKNGAVVVCRIQVNNLICIENFSDFPQLGRFTLR 415
>05_06_0009 -
24829482-24829711,24830164-24830435,24830734-24830956,
24832284-24832524
Length = 321
Score = 33.1 bits (72), Expect = 0.26
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 563 LDCHTAHIACKFAEIKEKVDRRTGKSN*SQPKIHQVWRC--SHCQLGTFQASMCRVLP 396
++ H + +FA I++KV R TG S S K +W C +H Q G Q RV P
Sbjct: 129 VEVHPSLSVMRFAPIQQKVPRSTGTSRVSSTKARFMWSCRGTH-QQGVHQHFTQRVSP 185
>11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903
Length = 1135
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 109 NYKIMLHYKPCKKYRKGMSL*P-FFPSK 189
N M PCKK +KGM++ P FF SK
Sbjct: 657 NVNKMSKLNPCKKQKKGMNILPKFFTSK 684
>05_01_0340 - 2677082-2678266
Length = 394
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 723 LSPGTASWRASXVHSHRLDFSS 788
LSPG SW VH HRL+ ++
Sbjct: 196 LSPGELSWADVAVHPHRLNLAA 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,167,068
Number of Sequences: 37544
Number of extensions: 412529
Number of successful extensions: 1027
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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