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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K08
         (796 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ...   129   2e-30
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ...   129   2e-30
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ...   129   2e-30
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ...   129   2e-30
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-...    83   3e-16
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,...    45   5e-05
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E...    37   0.013
At4g27900.2 68417.m04005 expressed protein                             32   0.50 
At4g27900.1 68417.m04004 expressed protein                             32   0.50 

>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
           identical to SWISS-PROT:P13905 elongation factor 1-alpha
           (EF-1-alpha) [Arabidopsis thaliana]
          Length = 449

 Score =  129 bits (311), Expect = 2e-30
 Identities = 61/108 (56%), Positives = 77/108 (71%)
 Frame = -3

Query: 791 ITTEVKSVGMHXXSSPRSCTWRQCRFQRKERVRQGLRRGYVAGDSKNNPPKGAADFTAQV 612
           +TTEVKSV MH  S   +       F  K    + L+RGYVA +SK++P KGAA+FT+QV
Sbjct: 273 LTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQV 332

Query: 611 IVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSN*SQPK 468
           I++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+GK    +PK
Sbjct: 333 IIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPK 380



 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -1

Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 293
           PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK+V+ K+  G K
Sbjct: 379 PKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAK 438

Query: 292 V 290
           V
Sbjct: 439 V 439


>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  129 bits (311), Expect = 2e-30
 Identities = 61/108 (56%), Positives = 77/108 (71%)
 Frame = -3

Query: 791 ITTEVKSVGMHXXSSPRSCTWRQCRFQRKERVRQGLRRGYVAGDSKNNPPKGAADFTAQV 612
           +TTEVKSV MH  S   +       F  K    + L+RGYVA +SK++P KGAA+FT+QV
Sbjct: 273 LTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQV 332

Query: 611 IVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSN*SQPK 468
           I++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+GK    +PK
Sbjct: 333 IIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPK 380



 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -1

Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 293
           PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK+V+ K+  G K
Sbjct: 379 PKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAK 438

Query: 292 V 290
           V
Sbjct: 439 V 439


>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  129 bits (311), Expect = 2e-30
 Identities = 61/108 (56%), Positives = 77/108 (71%)
 Frame = -3

Query: 791 ITTEVKSVGMHXXSSPRSCTWRQCRFQRKERVRQGLRRGYVAGDSKNNPPKGAADFTAQV 612
           +TTEVKSV MH  S   +       F  K    + L+RGYVA +SK++P KGAA+FT+QV
Sbjct: 273 LTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQV 332

Query: 611 IVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSN*SQPK 468
           I++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+GK    +PK
Sbjct: 333 IIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPK 380



 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -1

Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 293
           PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK+V+ K+  G K
Sbjct: 379 PKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAK 438

Query: 292 V 290
           V
Sbjct: 439 V 439


>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  129 bits (311), Expect = 2e-30
 Identities = 61/108 (56%), Positives = 77/108 (71%)
 Frame = -3

Query: 791 ITTEVKSVGMHXXSSPRSCTWRQCRFQRKERVRQGLRRGYVAGDSKNNPPKGAADFTAQV 612
           +TTEVKSV MH  S   +       F  K    + L+RGYVA +SK++P KGAA+FT+QV
Sbjct: 273 LTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQV 332

Query: 611 IVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSN*SQPK 468
           I++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+GK    +PK
Sbjct: 333 IIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPK 380



 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -1

Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 293
           PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK+V+ K+  G K
Sbjct: 379 PKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAK 438

Query: 292 V 290
           V
Sbjct: 439 V 439


>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
           domain-containing protein similar to SP|P13905
           Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
           thaliana}; contains Pfam profile PF03143: Elongation
           factor Tu C-terminal domain
          Length = 104

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 35/60 (58%), Positives = 48/60 (80%)
 Frame = -1

Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 293
           PK +K+ +AAI+N+ P+KP+ VE++  +PPLGRFA+RDMRQTV VGVIK+V  K+  G K
Sbjct: 45  PKFLKNSEAAIINMTPTKPMVVEAYSAYPPLGRFAIRDMRQTVGVGVIKSVVKKDPSGAK 104



 Score = 69.3 bits (162), Expect = 3e-12
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = -3

Query: 605 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSN*SQPK 468
           +NH GQI NGYTPVLDCHT+HIA KF+EI  K+D RTG     +PK
Sbjct: 1   MNHLGQIKNGYTPVLDCHTSHIAVKFSEILTKIDWRTGHEIEKEPK 46


>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
           putative similar to EF-1-alpha-related GTP-binding
           protein gi|1009232|gb|AAA79032
          Length = 532

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 17/45 (37%), Positives = 29/45 (64%)
 Frame = -1

Query: 463 IKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 329
           +K+G A +  +  +  +C+E F +FP LGRF +R   +T+AVG +
Sbjct: 478 VKNGAAVVCRIQVTNSICIEKFSDFPQLGRFTLRTEGKTIAVGKV 522



 Score = 31.5 bits (68), Expect = 0.67
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = -3

Query: 650 NPPKGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGK 489
           NP     +F AQ+ +L        + GY  +L  H     C+  E+K ++D +T K
Sbjct: 414 NPVPAVTEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELKSQIDLKTRK 469


>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
           EF-1-alpha, putative contains similarity to
           SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
           [Aeropyrum pernix]
          Length = 667

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = -1

Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 320
           P+ + +  +A++ +    P+CVE+F E   LGR  +R   +TVA+G +  +
Sbjct: 613 PRCLTAKQSAMLEVSLQNPVCVETFSESRALGRVFLRSSGRTVAMGKVTRI 663


>At4g27900.2 68417.m04005 expressed protein
          Length = 261

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -1

Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 380
           PKS+ SG+ + +++V  K   ++ F +FPP+
Sbjct: 144 PKSVSSGNLSSMDMVEHKDAVIQGFPDFPPV 174


>At4g27900.1 68417.m04004 expressed protein
          Length = 261

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -1

Query: 472 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 380
           PKS+ SG+ + +++V  K   ++ F +FPP+
Sbjct: 144 PKSVSSGNLSSMDMVEHKDAVIQGFPDFPPV 174


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,215,175
Number of Sequences: 28952
Number of extensions: 326068
Number of successful extensions: 814
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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