Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K07
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.93 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.2  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   2.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -1

Query: 109 RLHNPAVAVKPSYI-PDDCRYI*PCYN 32
           +++    A  P Y  PDDC+Y   C N
Sbjct: 174 KVNETVAATHPRYADPDDCQYFYVCIN 200


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
 Frame = -1

Query: 427 VSWRLISLWENNNVIFKILN------TEHEMYLKLDVNVDSY 320
           ++WR+   W   NV+ KI+       T    Y+ + +++D Y
Sbjct: 104 IAWRITVAWYAGNVLCKIIRFLQAVVTYSSTYVLVALSIDRY 145


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 151 VGEQRDSRRQPRVLRLHNPAVAVKPSYIPDDCRYI*PCYNKFYH 20
           V ++ DS   P +   HNPA +  PSY         P YN +Y+
Sbjct: 8   VKQEADST-SPLLTPPHNPAYSPPPSYCD-------PWYNPYYY 43


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -3

Query: 434 LPSQLATHLSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQEDLGIERF 288
           L S LA+   L   +++++    R +D+LE  R+RG L    ++GI+ +
Sbjct: 424 LTSALASWSPLTNPKQYMEIFA-RWKDILEKPRQRGTL-EGNNMGIQPY 470


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -1

Query: 388 VIFKILNTEHEMYL-KLDVNVDSYGDRKTWGSNDSSEKRHTWYLYPVKVGDQQLFLIENR 212
           V+   + T H  ++ +L   VD YG    W ++  +   +T+ + PV V  +++ L E R
Sbjct: 122 VVTYSVKTGHPYFVNQLFSAVDPYGLVAQWATDALNPSVYTYEVSPVFVLMEEVVLREMR 181


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -3

Query: 461 LGRRKRLHQLPSQ--LATHLSLGKQQRHLQDTEHRTRDVLETGRERG 327
           L R ++L   P    L    SLG  +R   + + +T D+ E  +E+G
Sbjct: 489 LARTEKLFVTPMYEGLLIDQSLGMNRRRDDEADVKTEDLDEIQKEKG 535


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -3

Query: 461 LGRRKRLHQLPSQ--LATHLSLGKQQRHLQDTEHRTRDVLETGRERG 327
           L R ++L   P    L    SLG  +R   + + +T D+ E  +E+G
Sbjct: 489 LARTEKLFVTPMYEGLLIDQSLGMNRRRDDEADVKTEDLDEIQKEKG 535


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -3

Query: 461 LGRRKRLHQLPSQ--LATHLSLGKQQRHLQDTEHRTRDVLETGRERG 327
           L R ++L   P    L    SLG  +R   + + +T D+ E  +E+G
Sbjct: 489 LARTEKLFVTPMYEGLLIDQSLGMNRRRDDEADVKTEDLDEIQKEKG 535


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -3

Query: 461 LGRRKRLHQLPSQ--LATHLSLGKQQRHLQDTEHRTRDVLETGRERG 327
           L R ++L   P    L    SLG  +R   + + +T D+ E  +E+G
Sbjct: 489 LARTEKLFVTPMYEGLLIDQSLGMNRRRDDEADVKTEDLDEIQKEKG 535


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,633
Number of Sequences: 336
Number of extensions: 3345
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)