Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K07
         (805 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_9125| Best HMM Match : Sulfotransfer_2 (HMM E-Value=1.4013e-45)     32   0.63 
SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)                      30   2.5  
SB_15570| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.8  
SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  
SB_8527| Best HMM Match : zf-C2H2 (HMM E-Value=4.3e-21)                28   7.7  

>SB_9125| Best HMM Match : Sulfotransfer_2 (HMM E-Value=1.4013e-45)
          Length = 480

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = -1

Query: 640 TPCRSRTSCGTRAXKDIVEDYFPSEFQLILDQK---RIKLIGKHYNQALKLDANVDRYND 470
           TP R  T   T + K +  D  P       +++   R+K   K       LD  +  Y D
Sbjct: 275 TPTRKGTPSQTVSGKPL--DVLPIRLTKFSNEQVEYRLKYYKKFMFVRNPLDRIISAYKD 332

Query: 469 RLTWGDGKDYTSYRVSW 419
           +LT GD   Y +YRV+W
Sbjct: 333 KLT-GDNDYYQAYRVNW 348


>SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1044

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = -1

Query: 532  LIGKHYN-QALKLDANVDRYNDRLTWGDGKD-YTSYRVSWRLISLWENNNVIFKILNTEH 359
            ++GK YN Q  K     D++ND L  GD KD Y +  +   +  LW ++     IL  + 
Sbjct: 829  VLGKTYNEQDRKNLQEADKHNDMLI-GDFKDIYLNLIIKTMMSHLWASSLDCCYILKADD 887

Query: 358  EMYLKL 341
            ++Y+++
Sbjct: 888  DVYIRV 893


>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
          Length = 695

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 154 KAVPXTSPRSHPASGPAGTPGSR*GTAVGRP-PSPGINTR 270
           K  P TSPRS P + P G+P S   + VG P  SP +  R
Sbjct: 345 KNSPRTSPRSSPFASPTGSPTS---SPVGSPAQSPSVFRR 381


>SB_15570| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 484

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 156 GGPRYQSTFASSFRPCRYSRFSMRNSCWSPTFTGYKYQVCLF 281
           G PR  S F  +    R+SRF        PTF+G K+   +F
Sbjct: 118 GSPRETSAFCEAM--LRFSRFRFERCKQRPTFSGLKFSNDMF 157


>SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1323

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 151  VGEQRDSRRQPRVLRLHNPAVAVKPSYIPDD 59
            +G +R   RQP   RL  PAV  K S +P++
Sbjct: 1198 LGNRRFQHRQPSYSRLRAPAVGQKKSDLPEN 1228


>SB_8527| Best HMM Match : zf-C2H2 (HMM E-Value=4.3e-21)
          Length = 1049

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 120 GCRRLSRCSPTQGGPRYQSTFASSFRPCRYSRFSMRNSCWSPTFTGYKY 266
           GCR+  + S      R+Q T  S  RP R +  S+ + C  P F G  +
Sbjct: 253 GCRQ--KYSRLDASTRHQWTARSVLRPSRIASISLLSLCPLPQFLGVDF 299


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,510,749
Number of Sequences: 59808
Number of extensions: 456087
Number of successful extensions: 1397
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)