Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K07
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40424-5|AAA81461.2|  638|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL022716-5|CAB97232.1|  291|Caenorhabditis elegans Hypothetical ...    29   5.1  
Z81514-8|CAB82214.1|  319|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z49907-2|CAA90084.1|  324|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p...    28   6.8  
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p...    28   6.8  
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p...    28   6.8  
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p...    28   6.8  
U28942-1|AAA68355.2|  441|Caenorhabditis elegans Hypothetical pr...    28   6.8  
J03146-1|AAA65468.1|  324|Caenorhabditis elegans collagen protein.     28   6.8  
AY241928-1|AAO85277.1|  806|Caenorhabditis elegans xylosyltransf...    28   6.8  
AL031630-24|CAB82205.1|  319|Caenorhabditis elegans Hypothetical...    28   6.8  
AJ496235-1|CAD42732.1|  806|Caenorhabditis elegans peptide O-xyl...    28   6.8  
AC025722-4|AAK68509.3|  806|Caenorhabditis elegans Squashed vulv...    28   6.8  

>U40424-5|AAA81461.2|  638|Caenorhabditis elegans Hypothetical
           protein C24A3.1 protein.
          Length = 638

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 476 QRPPNLGRRKRLHQLPSQLATHLSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQED 306
           +RPP  G    L +L SQLA    + +Q R L   E   R  LE  ++  Q R Q +
Sbjct: 81  ERPPRTGDDAALSRLQSQLA---QMQQQNRDLATAEKAARKRLEQNQDALQRRLQNN 134


>AL022716-5|CAB97232.1|  291|Caenorhabditis elegans Hypothetical
           protein C24F3.6 protein.
          Length = 291

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 190 ASGPAGTPGSR*GTAVGRPPSPGIN 264
           A GP GTPGS      G+P +PG+N
Sbjct: 96  AQGPPGTPGS--AGRPGKPGAPGLN 118


>Z81514-8|CAB82214.1|  319|Caenorhabditis elegans Hypothetical
           protein F26F2.1 protein.
          Length = 319

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -2

Query: 648 HQERHVVRVQAVARGPXRTSSKITSRANSNSYSTKRELNSS 526
           H+E H  RV     GP R +S  TSRA+   +  +R+ N+S
Sbjct: 172 HREDHQTRVGNRGNGPYRGNSHNTSRAD-ELHLQRRQTNNS 211


>Z49907-2|CAA90084.1|  324|Caenorhabditis elegans Hypothetical
           protein B0491.2 protein.
          Length = 324

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = -3

Query: 380 QDTEHRTRDVLETGRERGQLRRQEDLGIERFQ*EETHLVFIPGEGGRPTAVPHREPGVP 204
           Q T    +D++  GR   ++RRQ          EET+    P   G P+A P + P VP
Sbjct: 48  QSTNGLWKDIVVIGRSSKRVRRQY---------EETNATPTPHADGSPSAPPGQPPAVP 97


>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
            protein F35D11.11a protein.
          Length = 1840

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -3

Query: 410  LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 312
            L++GKQ+R L + E+  R + +  +ER QL R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516


>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
            protein F35D11.11c protein.
          Length = 1898

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -3

Query: 410  LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 312
            L++GKQ+R L + E+  R + +  +ER QL R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516


>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
            protein F35D11.11d protein.
          Length = 1671

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -3

Query: 410  LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 312
            L++GKQ+R L + E+  R + +  +ER QL R+
Sbjct: 1244 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1276


>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
            protein F35D11.11b protein.
          Length = 1911

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -3

Query: 410  LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 312
            L++GKQ+R L + E+  R + +  +ER QL R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516


>U28942-1|AAA68355.2|  441|Caenorhabditis elegans Hypothetical
           protein F56D3.1 protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 589 RCPXWPSCHSLYANDMAFLMPCXTSCETTSRQTSXP 696
           +CP WPS H  Y N++    P    C T  R    P
Sbjct: 340 QCPEWPSLH--YRNNVVANEPVRIFCVTCQRPRRRP 373


>J03146-1|AAA65468.1|  324|Caenorhabditis elegans collagen protein.
          Length = 324

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = -3

Query: 380 QDTEHRTRDVLETGRERGQLRRQEDLGIERFQ*EETHLVFIPGEGGRPTAVPHREPGVP 204
           Q T    +D++  GR   ++RRQ          EET+    P   G P+A P + P VP
Sbjct: 48  QSTNGLWKDIVVIGRSSKRVRRQY---------EETNATPTPHADGSPSAPPGQPPAVP 97


>AY241928-1|AAO85277.1|  806|Caenorhabditis elegans
           xylosyltransferase protein.
          Length = 806

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 241 DQQLFLIENREYRQGLKLDANVDW 170
           D ++F I  RE+ Q L++D   DW
Sbjct: 376 DNRMFRIGKREFPQNLRIDGGSDW 399


>AL031630-24|CAB82205.1|  319|Caenorhabditis elegans Hypothetical
           protein F26F2.1 protein.
          Length = 319

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -2

Query: 648 HQERHVVRVQAVARGPXRTSSKITSRANSNSYSTKRELNSS 526
           H+E H  RV     GP R +S  TSRA+   +  +R+ N+S
Sbjct: 172 HREDHQTRVGNRGNGPYRGNSHNTSRAD-ELHLQRRQTNNS 211


>AJ496235-1|CAD42732.1|  806|Caenorhabditis elegans peptide
           O-xylosyltransferase protein.
          Length = 806

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 241 DQQLFLIENREYRQGLKLDANVDW 170
           D ++F I  RE+ Q L++D   DW
Sbjct: 376 DNRMFRIGKREFPQNLRIDGGSDW 399


>AC025722-4|AAK68509.3|  806|Caenorhabditis elegans Squashed vulva
           protein 6 protein.
          Length = 806

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 241 DQQLFLIENREYRQGLKLDANVDW 170
           D ++F I  RE+ Q L++D   DW
Sbjct: 376 DNRMFRIGKREFPQNLRIDGGSDW 399


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,604,570
Number of Sequences: 27780
Number of extensions: 332184
Number of successful extensions: 1114
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)