BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_K07 (805 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g15640.1 68415.m01791 F-box family protein contains Pfam PF00... 31 0.90 At5g47850.1 68418.m05912 protein kinase, putative contains simil... 30 1.6 At2g32040.1 68415.m03914 integral membrane transporter family pr... 30 1.6 At5g51300.2 68418.m06360 splicing factor-related contains simila... 28 6.3 At5g51300.1 68418.m06359 splicing factor-related contains simila... 28 6.3 At4g19230.2 68417.m02837 cytochrome P450 family protein cytochro... 28 8.3 At4g19230.1 68417.m02836 cytochrome P450 family protein cytochro... 28 8.3 >At2g15640.1 68415.m01791 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain Length = 426 Score = 31.1 bits (67), Expect = 0.90 Identities = 11/49 (22%), Positives = 28/49 (57%) Frame = -1 Query: 403 WENNNVIFKILNTEHEMYLKLDVNVDSYGDRKTWGSNDSSEKRHTWYLY 257 WE++ I+K+ ++ + Y++ ++N D + + W D +++ + Y Y Sbjct: 278 WEDDVDIYKLYYSDVDEYVEYNINDDDINELRVWVLEDVKKQQWSKYAY 326 >At5g47850.1 68418.m05912 protein kinase, putative contains similarity to cytokinin-regulated kinase 1 [Nicotiana tabacum] gi|10998537|gb|AAG25966; contains protein kinase domain, Pfam:PF00069 Length = 751 Score = 30.3 bits (65), Expect = 1.6 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +3 Query: 159 GPRYQSTFASSFRPCRYSRFSMRNSCWSPTF 251 GP + A +FR C R S R CW P + Sbjct: 122 GPELEELEAGNFRICGVERVSRRLRCWQPYY 152 >At2g32040.1 68415.m03914 integral membrane transporter family protein contains 9 transmembrane domains; contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter; similar to high affinity folic acid/methotrexate transporter 5 (GI:21898554) [Leishmania tarentolae] Length = 560 Score = 30.3 bits (65), Expect = 1.6 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 95 WIMKP*YSGLSATVPLFPHTRRS 163 W++KP Y +S +VPLF + RRS Sbjct: 173 WLVKPLYGFISDSVPLFGYRRRS 195 >At5g51300.2 68418.m06360 splicing factor-related contains similarity to SF1 protein [Drosophila melanogaster] GI:6687400 Length = 804 Score = 28.3 bits (60), Expect = 6.3 Identities = 11/30 (36%), Positives = 14/30 (46%) Frame = -2 Query: 150 WGNNGTVADNPEYYGFIIQPWQ*NPPTSQT 61 W NN +V+ G + PW NPP T Sbjct: 734 WANNPSVSTPDHSQGLVNAPWAPNPPMPPT 763 >At5g51300.1 68418.m06359 splicing factor-related contains similarity to SF1 protein [Drosophila melanogaster] GI:6687400 Length = 804 Score = 28.3 bits (60), Expect = 6.3 Identities = 11/30 (36%), Positives = 14/30 (46%) Frame = -2 Query: 150 WGNNGTVADNPEYYGFIIQPWQ*NPPTSQT 61 W NN +V+ G + PW NPP T Sbjct: 734 WANNPSVSTPDHSQGLVNAPWAPNPPMPPT 763 >At4g19230.2 68417.m02837 cytochrome P450 family protein cytochrome P450, Arabidopsis thaliana; supported by cDNA: gi_15293092_gb_AY050980.1_ Length = 484 Score = 27.9 bits (59), Expect = 8.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 448 KDYTSYRVSWRLISLWENNNVIFKILNTEHEMYLKLDVNVDSYGDRKTWG 299 +D T+ +SW L L EN NV+ + TE +M ++ D G+ TWG Sbjct: 277 RDTTASVMSWILKYLAENPNVLEAV--TEEQMAIRKD---KEEGESLTWG 321 >At4g19230.1 68417.m02836 cytochrome P450 family protein cytochrome P450, Arabidopsis thaliana; supported by cDNA: gi_15293092_gb_AY050980.1_ Length = 467 Score = 27.9 bits (59), Expect = 8.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 448 KDYTSYRVSWRLISLWENNNVIFKILNTEHEMYLKLDVNVDSYGDRKTWG 299 +D T+ +SW L L EN NV+ + TE +M ++ D G+ TWG Sbjct: 277 RDTTASVMSWILKYLAENPNVLEAV--TEEQMAIRKD---KEEGESLTWG 321 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,860,595 Number of Sequences: 28952 Number of extensions: 303985 Number of successful extensions: 896 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 875 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 896 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1824072800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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