Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K03
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718     30   1.9  
10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82...    29   3.3  
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054...    29   4.3  
11_01_0752 - 6327269-6327764,6328571-6328839                           28   7.5  
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810...    28   7.5  
03_02_0296 + 7191455-7191615,7192031-7192071,7192156-7192741,719...    28   9.9  
01_01_0061 + 483116-483757,483891-484046,484171-484262,484410-48...    28   9.9  

>05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718
          Length = 756

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -2

Query: 655 LRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTP-SKRKCLMKSKCLLTSP 494
           L   +T P     R+P++SP+  +    T  ++ S TP SK+    K K L  SP
Sbjct: 693 LEKEITMPRNRYWRTPVKSPVPAKKLEQTAQNKPSSTPKSKKVWKEKPKTLAPSP 747


>10_01_0062 -
           818396-818538,819482-819693,819936-820420,820540-820696,
           820787-820924,821127-821703,821978-822018,822679-822809
          Length = 627

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 239 GCVLCINWLL*ALFKATFSLVYRSREFVTETRSCVVVICYYFVSFYMLVI 90
           GC+ C    L   F  T ++ Y S   +     CV+V+ +  V+F +LV+
Sbjct: 356 GCLFCGPLFLTFCFLNTVAIAYNSTAALPFGTICVIVLIWTLVTFPLLVL 405


>05_04_0028 +
           17302359-17302445,17303887-17303952,17305415-17305489,
           17305638-17305737,17305819-17305865,17305937-17305994,
           17306161-17306210,17306417-17306473,17306561-17306703,
           17306793-17306834,17307083-17307124,17308239-17308272,
           17308342-17308443,17310373-17310652,17311202-17311332,
           17311676-17311773,17312525-17312717
          Length = 534

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
 Frame = -2

Query: 799 THTKSLRKAXGKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRS- 623
           +H++S+ ++  +S+  S   +     S +P   +S ++    S  P K RS   S +RS 
Sbjct: 198 SHSRSISRSRSRSRSISRSRSRSYSRSRSPRS-RSASR----SHSPVKERSRSASQSRSP 252

Query: 622 -K*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKS 515
            K RSP RSP         KS+ KS  P K + L +S
Sbjct: 253 VKERSPSRSPPPATSPPREKSASKS--PVKSRSLSRS 287


>11_01_0752 - 6327269-6327764,6328571-6328839
          Length = 254

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 790 KSLRKAXGKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSP 644
           ++ +   G+S  +   PT     S  P+   SP+  P +  CP KLRSP
Sbjct: 45  RTSKPTEGESTTRRCRPTQSPSTSGAPAA-SSPSFSPASPSCPAKLRSP 92


>05_06_0276 +
           26878732-26879574,26879920-26880387,26880800-26881021,
           26881153-26881278,26881309-26881573,26881719-26881936
          Length = 713

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -2

Query: 649 SPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRK 530
           SP  SP RS  RSP R  +K Q ++  +S  +S +P++++
Sbjct: 67  SPRRSPVRSIGRSPQRDRVKEQVRSPKQSWSRSPSPARKR 106


>03_02_0296 +
           7191455-7191615,7192031-7192071,7192156-7192741,
           7193307-7193444,7193572-7193728,7193848-7194332,
           7194867-7195086
          Length = 595

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -1

Query: 239 GCVLCINWLL*ALFKATFSLVYRSREFVTETRSCVVVICYYFVSFYMLVI 90
           GC+ C    L   F  T ++ Y +   +     CV+V+ +  V+F +LV+
Sbjct: 369 GCLFCGPLFLTFCFLNTVAIAYSATAALPFGTICVIVLIWTLVTFPLLVL 418


>01_01_0061 +
           483116-483757,483891-484046,484171-484262,484410-485076
          Length = 518

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 751 STGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRS 623
           S GP  +  +  +P ++K PT   +  + P K R P  SP RS
Sbjct: 134 SWGPENHAGILASPRVIK-PTTLNFEDRTPVKERPPAPSPARS 175


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,659,963
Number of Sequences: 37544
Number of extensions: 290005
Number of successful extensions: 701
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)