Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K03
(800 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 34 0.12
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 33 0.20
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 33 0.36
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) 31 0.82
SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014) 31 0.82
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 31 1.1
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_40786| Best HMM Match : WSC (HMM E-Value=0.44) 30 1.9
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3) 29 4.4
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 29 4.4
SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32) 29 5.8
SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1) 28 7.7
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 34.3 bits (75), Expect = 0.12
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = -2
Query: 763 SKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPI--RSPLK 590
S S+ P + +PS L SP+ P TS P SPLTS + SP+ SPL
Sbjct: 171 SPLTSSSPLTSSSPLTSPSPLTSPS--PLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLT 228
Query: 589 CQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRST 482
+ S S +P + S LTSP+ T
Sbjct: 229 SPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLT 264
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = -2
Query: 682 PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLL 503
P TS P SPLTSP S SP SPL + S S +P + S L
Sbjct: 172 PLTSSSPLTSSSPLTSP--SPLTSP--SPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPL 227
Query: 502 TSPTRSTKEVQVPLVKEVP 446
TSP+ T PL P
Sbjct: 228 TSPSPLTS--SSPLTSSSP 244
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 33.5 bits (73), Expect = 0.20
Identities = 29/90 (32%), Positives = 39/90 (43%)
Frame = -2
Query: 748 TGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLT 569
T P SL S SP P TS + SP TSP S SP ++ K +
Sbjct: 104 TSPKTMRMKSLKTSPKTSPEIGPRTSPKTSSKTSPKTSPKSSPKTSP-KTSSKTSLKTSQ 162
Query: 568 KSSRKSLTPSKRKCLMKSKCLLTSPTRSTK 479
K+S + + R+ +K + L TSP S K
Sbjct: 163 KTSLNASRKTSRRTSLK-RSLKTSPKTSRK 191
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 32.7 bits (71), Expect = 0.36
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Frame = -2
Query: 709 SMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTK--SSRKSLTP-- 542
S +SP + +S C + + +S+ RS RSP + +Y++ ++ R+S +P
Sbjct: 301 SKSRSPRRYRDSSSCRRRRSRSRSRSPKSRLRSRSRSPYRIRYRSRSRPPRGRRSQSPRR 360
Query: 541 ------SKRKCLMKSKCLLTSPTRSTKE 476
S+R+C KS + +SP +S E
Sbjct: 361 RRTRSRSRRRCRSKSSSIASSPDKSKDE 388
>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 781 RKAXGKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIR 602
R +++ S P +YT S+TP + SP Q S P++ ++ TS R+ PIR
Sbjct: 601 RPKSARTRAWSVSPRLYTPKSITPKFILSPRQ--TLSAPPSRPKTAPTSAQRTP--EPIR 656
Query: 601 SPL 593
PL
Sbjct: 657 KPL 659
>SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013)
Length = 340
Score = 31.5 bits (68), Expect = 0.82
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -2
Query: 715 TPSMLKSPTQ*-PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPS 539
TP+ K P+ P+ S PTK P S +K P +S + TKS++ + +
Sbjct: 146 TPTSTKQPSSSRPFKSTKPTKSTKPTKSTKATKSTKPTKSTKPTKPTKPTKSTKPTKSTK 205
Query: 538 KRKCLMKSKCLLTSPT 491
K ++ T+PT
Sbjct: 206 PTKSTKPTESKPTAPT 221
>SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014)
Length = 351
Score = 31.5 bits (68), Expect = 0.82
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -2
Query: 661 TKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLM--KSKCLLTSPTR 488
TK + P T T++K RS R LKC L + K + KRK K K LL + +
Sbjct: 62 TKSKEPETDGTQNK-RSRKRKLLKCDQLLLPDTRLKPIGSKKRKVKQSSKKKTLLVNDSS 120
Query: 487 STKE--VQVPLVKE 452
S ++ PLVKE
Sbjct: 121 SDEDEPPPKPLVKE 134
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = -2
Query: 721 SLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTP 542
S++P + K Q S+ P + S SP R K RSP RSP K + + + S +P
Sbjct: 171 SVSPPIYKGREQ--LKSKSPKRTWS--NSPFRHKSRSPFRSPQKERIPHQSPERLPSWSP 226
Query: 541 SKRKCLMKSKCLLTSPTRS 485
++ K+ L+ P RS
Sbjct: 227 VRQSPFNKTHRRLSPPRRS 245
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 715 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQY 581
TP + PT P S+ P R L +PTR+ PI SP + Q+
Sbjct: 76 TPVLPSPPTNTPRPSRIPRLKRRRLQTPTRTTTLPPIHSPPQDQH 120
>SB_40786| Best HMM Match : WSC (HMM E-Value=0.44)
Length = 230
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = -2
Query: 739 TMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSS 560
T+ T L TP+ K P+ P + PT+ P SPTR + S L CQ ++ +
Sbjct: 128 TLPTTLPTTPTPTKRPSPSPTGTGTPTRKPEPTLSPTR------MLSGLLCQSFVVSLCT 181
Query: 559 RKSLTPSKRKC 527
R+ + ++ C
Sbjct: 182 RQDTSGMEQPC 192
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -2
Query: 658 KLRSPLT----SPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPT 491
+LR+PL SP + RS + YQ LT ++ PS+ + + + L SPT
Sbjct: 2025 ELRTPLVTADISPEQPSPRSELEKRAISDYQPLTINASYHRRPSEPRIVSPAGSSLASPT 2084
Query: 490 RSTKEVQVPLVKEVPYPVKYHVPI 419
V + P V +H P+
Sbjct: 2085 SIATSVITGVTGLHPVTVSHHQPL 2108
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = -2
Query: 787 SLRKAXGKSKYQSTGPTMYTCLSLTPSMLKSPTQ*--PYTSQCPTKLRSPLTSP--TRSK 620
+L A ++ Q+ PT + P+ +PTQ P + PT+ + P+ SP T+++
Sbjct: 709 TLSTAAQPTQAQNPAPTPAPTQAQNPAPTPAPTQAQNPAPTPAPTQAQPPVPSPAPTQAQ 768
Query: 619 *RSPIRSPLKCQYQNLTKSSRKSLTPSKRK 530
+P +P + Q + ++ + +++K
Sbjct: 769 PPAPSPAPTQALLQTMANQTQPATATAEQK 798
>SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 171
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 715 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQY 581
TP + PT P S+ P R L +PT+ PI SP + Q+
Sbjct: 117 TPLLPSPPTNTPRPSRIPRLKRRRLQTPTKRSTLPPIHSPPQDQH 161
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 715 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQY 581
TP + PT P S P R L +PT++ PI SP + Q+
Sbjct: 116 TPLLPSPPTSTPRPSHIPRLKRRRLQTPTKTTTLPPIHSPPQDQH 160
>SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32)
Length = 355
Score = 28.7 bits (61), Expect = 5.8
Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = -2
Query: 763 SKYQSTGPTMYTCL--SLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLK 590
S Y+ST T+YT S +++ S T P +S T + S + P+ K ++
Sbjct: 238 SSYRSTLATLYTIRPSSHRSTLVTSCTIRP-SSHRSTLVTSCIIRPSSHKSTLVTLCTIR 296
Query: 589 CQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYH 428
T + ++ PS + + + C++T + + V + ++ +P + YH
Sbjct: 297 PSSHRSTLVNLCTIRPSSHRSTLVTLCIITPSSHRSTLVTLCTIRRLPCHLMYH 350
>SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1)
Length = 2568
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 666 HWLVYGHWVGLFNMDGVRLRHVYIVGPVDWY 758
+WL+ G W +FN V++ I GP + Y
Sbjct: 1720 YWLLEGAWPAVFNRAAVQMHGELIEGPREGY 1750
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -2
Query: 244 FVVVFCVLIGCCEHYL 197
F++V+C+++GCC YL
Sbjct: 3 FMLVWCIVVGCCMAYL 18
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -2
Query: 682 PYTSQCPTKLR-SPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRK--SLTPSKRKCLMK 518
P S P + R SP SP R + RSP SP + L RK S PS R+ K
Sbjct: 913 PTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRARRK 970
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,788,909
Number of Sequences: 59808
Number of extensions: 355830
Number of successful extensions: 1033
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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