Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K03
(800 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 37 0.018
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 31 0.67
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 1.6
At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative stro... 30 2.1
At1g66340.1 68414.m07534 ethylene receptor 1 (ETR1) identical to... 30 2.1
At5g24500.1 68418.m02887 expressed protein 29 3.6
At1g30320.1 68414.m03708 remorin family protein contains Pfam do... 29 3.6
At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR... 29 4.7
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 29 4.7
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 29 4.7
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 29 4.7
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 29 4.7
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 29 4.7
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 29 4.7
At2g40040.1 68415.m04920 defective chloroplasts and leaves prote... 28 6.3
At1g09060.2 68414.m01011 transcription factor jumonji (jmjC) dom... 28 6.3
At1g09060.1 68414.m01010 transcription factor jumonji (jmjC) dom... 28 6.3
At2g04080.1 68415.m00391 MATE efflux family protein similar to h... 28 8.3
At2g04066.1 68415.m00389 MATE efflux protein-related similar to ... 28 8.3
At1g78700.1 68414.m09173 brassinosteroid signalling positive reg... 28 8.3
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 36.7 bits (81), Expect = 0.018
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = -2
Query: 784 LRKAXGKSKYQSTGPTMYTCLSLTPSML--KSPTQ*PYTSQCPTKLRSPLTSPTRSK*RS 611
LR++ +S +S + LS +P L +S ++ P + RSP+ SP +S RS
Sbjct: 515 LRRSSRRSPSRSPVRSSRRSLSRSPIQLSRRSLSRSPTRLSRRSLSRSPIRSPRKSVSRS 574
Query: 610 PIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTK 479
P+RS K ++ +SSR+ ++ S + KS + SP R ++
Sbjct: 575 PVRSSRKSVSRSPVRSSRRRISRSPVRSSRKS--VSRSPIRLSR 616
Score = 36.3 bits (80), Expect = 0.024
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = -2
Query: 751 STGPTMYTCLSLTPSMLKSP----TQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQ 584
S PT + SL+ S ++SP ++ P S + RSP+ S R RSP+RS K
Sbjct: 548 SRSPTRLSRRSLSRSPIRSPRKSVSRSPVRSSRKSVSRSPVRSSRRRISRSPVRSSRKSV 607
Query: 583 YQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKEV 473
++ + SR+S+ S+ + + + SP R + +
Sbjct: 608 SRSPIRLSRRSI--SRSPIRLSRRSISRSPVRGRRRI 642
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 31.5 bits (68), Expect = 0.67
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = -2
Query: 715 TPSMLKSPTQ*PYT------SQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRK 554
TPSM+ SP+ P S P+ L SP TSP SP +P + + S+
Sbjct: 632 TPSMVVSPSTSPPAGHLGSPSDTPSSLVSPSTSPPAGHLGSPSDTPSSVVTPSASPSTSP 691
Query: 553 SLTPSKRKCLMKSKCLLTSPTRS 485
S +PS S SP+ S
Sbjct: 692 SASPSVSPSAFPSASPSASPSAS 714
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = -2
Query: 712 PSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKR 533
P +PTQ P S T++ +P + +S+ SP+++P Q + + TPS
Sbjct: 649 PMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSS 708
Query: 532 KCLMKSKCLLTSPTRSTKEVQVP 464
+ SP ++ VQ P
Sbjct: 709 ESYQAPN---LSPVQAPTPVQAP 728
>At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative strong
similarity to SP|O22315 Pre-mRNA splicing factor SF2
(SR1 protein) {Arabidopsis thaliana}
Length = 300
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -2
Query: 799 THTKSLRKAXGKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK 620
+H++S + KS + + LS + S +SP+ P + P + S S +RS+
Sbjct: 227 SHSRSRSLSRSKSPRKDLSKSPRRSLSRSISKSRSPS--PDKKKSPPRAMSRSKSRSRSR 284
Query: 619 *RSPIRSPLK 590
RSP +SP K
Sbjct: 285 SRSPSKSPPK 294
>At1g66340.1 68414.m07534 ethylene receptor 1 (ETR1) identical to
GB:P49333 from [Arabidopsis thaliana] (Science 262
(5133), 539-544 (1993))
Length = 738
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 532 KCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 419
+ L +C L PTR+ E+Q+ +PV+Y VPI
Sbjct: 172 RTLALEECALWMPTRTGLELQLSYTLRHQHPVEYTVPI 209
>At5g24500.1 68418.m02887 expressed protein
Length = 334
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/94 (26%), Positives = 39/94 (41%)
Frame = -2
Query: 733 YTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRK 554
+T ++ T S SP P S P SP P + + S + + N + SS+
Sbjct: 48 HTEIAATSSASDSPPSAPIPSD-PELAESPSEEPVPGEWYG-VMSDVLFELFNFSGSSKS 105
Query: 553 SLTPSKRKCLMKSKCLLTSPTRSTKEVQVPLVKE 452
S P K+K K + ++V VPLV +
Sbjct: 106 STIPGKKKLPRKQSNPRHCSLETPEDVVVPLVNQ 139
>At1g30320.1 68414.m03708 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 509
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = -2
Query: 793 TKSLRKAXGKSKYQSTGPTMYT-CL-SLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK 620
T+S A + + GP + + C+ + M P+Q P S P +PL SPT S
Sbjct: 263 TQSNDLADSSHDHTTGGPAIRSVCMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPTSSL 322
Query: 619 *RSPIRSPLKCQYQNLTKSSRKSLTPSKRK 530
+P + + +++K++R+ L+ + K
Sbjct: 323 PSTPRGG--QPEESSMSKNTRRELSEEEEK 350
>At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR1
protein, putative strong similarity to SP|O22315
Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis
thaliana}; cDNA NCBI_gi:15810292 supports a truncated
version while protein evidence supports a longer model.
Length = 278
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/69 (34%), Positives = 38/69 (55%)
Frame = -2
Query: 700 KSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLM 521
+SP++ S+ ++ RSP S +RS+ RS RSP + ++L +S KS + S R
Sbjct: 200 RSPSRGRSYSKSRSRGRSPSRSRSRSRSRSKSRSP---KAKSLRRSPAKSTSRSPRS-RS 255
Query: 520 KSKCLLTSP 494
+SK SP
Sbjct: 256 RSKSRSLSP 264
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -2
Query: 682 PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSR 557
P S+ P + RSP S +RS+ S RSP++ + +++ + SR
Sbjct: 112 PVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVEERSR 153
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -2
Query: 682 PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSR 557
P S+ P + RSP S +RS+ S RSP++ + +++ + SR
Sbjct: 123 PVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVEERSR 164
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -2
Query: 682 PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSR 557
P S+ P + RSP S +RS+ S RSP++ + +++ + SR
Sbjct: 153 PVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVEERSR 194
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 631 TRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTK 479
+RS+ RS SP++ + + + SS +S SKRK K K SP +S +
Sbjct: 833 SRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGKSRR 883
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 631 TRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTK 479
+RS+ RS SP++ + + + SS +S SKRK K K SP +S +
Sbjct: 803 SRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGKSRR 853
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = -2
Query: 700 KSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLT--PSKRKC 527
K P + P + ++ P+ PT++ + P + P+K TK+ K T P K
Sbjct: 105 KPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPV 164
Query: 526 LMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPIY 416
+K + PT+ V+ P+ PVK P+Y
Sbjct: 165 YPPTKAPVKPPTK--PPVKPPVSPPAKPPVK--PPVY 197
>At2g40040.1 68415.m04920 defective chloroplasts and leaves
protein-related / DCL protein-related similar to DCL
protein, chloroplast precursor (Defective chloroplasts
and leaves protein) (Swiss-Prot:Q42463) [Lycopersicon
esculentum]
Length = 839
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/84 (23%), Positives = 47/84 (55%)
Frame = -2
Query: 715 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSK 536
T + +SP+Q +Q P++ ++ SP++++ +S +S + Q Q+ ++S +S + S+
Sbjct: 750 TQTQSQSPSQ--TRAQSPSQAQA--QSPSQTQSQSQSQSQSQSQSQSQSQSQSQSQSQSQ 805
Query: 535 RKCLMKSKCLLTSPTRSTKEVQVP 464
+ S+ SP+++ + Q P
Sbjct: 806 SQSQSPSQTQTQSPSQTQAQAQSP 829
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/61 (26%), Positives = 36/61 (59%)
Frame = -2
Query: 715 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSK 536
+PS +S +Q SQ ++ +S S ++S+ +S +SP + Q Q+ +++ ++ +PS
Sbjct: 772 SPSQTQSQSQSQSQSQSQSQSQSQSQSQSQSQSQSQSQSPSQTQTQSPSQTQAQAQSPSS 831
Query: 535 R 533
+
Sbjct: 832 Q 832
>At1g09060.2 68414.m01011 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 930
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/105 (20%), Positives = 44/105 (41%)
Frame = -2
Query: 757 YQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQ 578
+QST P Y+ S S + + QC K R + S + R+ + L +Y
Sbjct: 182 HQSTSPMEYSAASTDVS---AESLGEICHQCQRKDRERIISCLKCNQRAFCHNCLSARYS 238
Query: 577 NLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPY 443
++ + + P+ R CL + T + ++P++ ++ Y
Sbjct: 239 EISLEEVEKVCPACRGLCDCKSCLRSDNTIKVRIREIPVLDKLQY 283
>At1g09060.1 68414.m01010 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 930
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/105 (20%), Positives = 44/105 (41%)
Frame = -2
Query: 757 YQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQ 578
+QST P Y+ S S + + QC K R + S + R+ + L +Y
Sbjct: 182 HQSTSPMEYSAASTDVS---AESLGEICHQCQRKDRERIISCLKCNQRAFCHNCLSARYS 238
Query: 577 NLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPY 443
++ + + P+ R CL + T + ++P++ ++ Y
Sbjct: 239 EISLEEVEKVCPACRGLCDCKSCLRSDNTIKVRIREIPVLDKLQY 283
>At2g04080.1 68415.m00391 MATE efflux family protein similar to
hypothetical protein GB:AAC27412; contains Pfam profile
PF01554: Uncharacterized membrane protein family
Length = 476
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +3
Query: 531 FLFDGVRDFLDDFVRFWYWHFNGDRIGLLYFDLVGL-VNGDLNFVGHWLVYGHWVGLFNM 707
F+ DG+ L+ R W G I ++ + LVG V L F W G W G+
Sbjct: 381 FILDGLTAVLNGVARGCGWQHIGALINVVAYYLVGAPVGVYLAFSREWNGKGLWCGVMVG 440
Query: 708 DGVRLRHVYIV-GPVDW 755
V+ + IV ++W
Sbjct: 441 SAVQATLLAIVTASMNW 457
>At2g04066.1 68415.m00389 MATE efflux protein-related similar to
multidrug secondary transporter-like TRANSPARENT TESTA
12 protein (Swiss-Prot:Q9LYT3) [Arabidopsis thaliana];
supported by tandem duplication of (GI:4734008)
(TIGR_Ath1:At2g04070) [Arabidopsis thaliana]
Length = 171
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +3
Query: 531 FLFDGVRDFLDDFVRFWYWHFNGDRIGLLYFDLVGL-VNGDLNFVGHWLVYGHWVGLFNM 707
F+ DG+ L+ R W G I ++ + LVG V L F W G W G+
Sbjct: 76 FILDGLTAVLNGVARGCGWQHIGALINVVAYYLVGAPVGVYLAFSREWNGKGLWCGVMVG 135
Query: 708 DGVRLRHVYIV-GPVDW 755
V+ + IV ++W
Sbjct: 136 SAVQATLLAIVTASMNW 152
>At1g78700.1 68414.m09173 brassinosteroid signalling positive
regulator-related contains similarity to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 325
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -2
Query: 673 SQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSP 494
S C + SP S S S SP + NLT +SL P + S +S
Sbjct: 91 SPCSSYQPSPCASYNPSPGSSNFMSPASSSFANLTSGDGQSLIPWLKHLSTTSSSSASSS 150
Query: 493 TRSTKEVQVP 464
+R + +P
Sbjct: 151 SRLPNYLYIP 160
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,832,815
Number of Sequences: 28952
Number of extensions: 242297
Number of successful extensions: 644
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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