Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K02
         (791 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    34   0.15 
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587...    31   1.4  
07_01_0036 + 298626-299573,299973-300239                               29   3.2  
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771...    28   9.8  
03_01_0218 - 1717246-1717892,1717995-1718163,1718262-1720022,172...    28   9.8  

>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
            26699321-26699416
          Length = 1515

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
 Frame = -2

Query: 301  NLLPMTWXQGNEAIKSEIIQKDFDSKIEELNPKQGSDSEPVETLEAGLKTDDSETLEV-P 125
            N L M   Q NEA+ S +   +  +K+EE N +  +  E VE LEA  KTD    L V  
Sbjct: 775  NELAMVQEQKNEAVASTV---ELGNKLEEQNQQISNLQEAVENLEAA-KTDMYNELTVCQ 830

Query: 124  EESQLXXXXXXXXXXXXKHVADEI---QKALKELEESNRKKKKK 2
            EE               K++  E+   Q  +  LE++N + ++K
Sbjct: 831  EEKNAALLQVQQLEANLKNLESELEQKQSQVSALEQANEELREK 874


>08_02_1091 +
           24256025-24256190,24256806-24257978,24258066-24258733,
           24258994-24260065,24260241-24260563,24260647-24260835,
           24261400-24261506,24262103-24262163,24262617-24262634
          Length = 1258

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 551 WLNVMKNLSLMCQLNKKLSASTRQRTDRLSS 459
           W+N+  NLS  C++N K+++  R + + L++
Sbjct: 805 WVNLSSNLSSKCKINSKITSPLRSKYESLTA 835


>07_01_0036 + 298626-299573,299973-300239
          Length = 404

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 490 RRVKEQIDLVVQRDRHHEVVLEICLGKGVHLKNGLLRCMT 371
           RRV   +D +  R+ H    L++ +G  +H    L RC T
Sbjct: 97  RRVTAWLDRLASREHHRLERLDVNIGAALHTPASLFRCET 136


>06_01_0993 +
           7710016-7710977,7711081-7711316,7711422-7711501,
           7711977-7712072,7712995-7713892,7713983-7714093,
           7714657-7714751
          Length = 825

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 8/38 (21%), Positives = 23/38 (60%)
 Frame = -3

Query: 660 HMRKFWL*DYPRQIKTQSVVNMPKPQVAQIELIKEIVV 547
           H++  WL   P++++       P+ ++ + E++K+I++
Sbjct: 404 HLKGLWLCPPPKEVEVDLSTLQPENKITREEMVKKIII 441


>03_01_0218 -
           1717246-1717892,1717995-1718163,1718262-1720022,
           1720531-1720610,1720854-1720981,1721004-1721012,
           1723701-1723742,1725891-1726002,1726358-1726514,
           1726678-1726762,1727628-1727713,1727998-1728042
          Length = 1106

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 633 SPK-AKISAYDNSVRCFGELSSIFS 704
           SPK A++ AYD+S+  FG+LS   S
Sbjct: 354 SPKQAEVCAYDDSMELFGQLSKAIS 378


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,229,959
Number of Sequences: 37544
Number of extensions: 237401
Number of successful extensions: 569
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)