Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K02
         (791 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.5  
SB_57953| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_54350| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   10.0 
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)                 28   10.0 

>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1137

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -2

Query: 277  QGNEAIKSEIIQKDFDSKIEELNPKQGSDSEPVETLEAGLKTDDSETLEVPEESQ 113
            +  E  K    +++   K E+   ++  D E  E  +   KTDDSET E   ES+
Sbjct: 1051 KAEEEEKKRKEEEESKKKDEKEKEEEDEDEEEEEEKKEDAKTDDSETKEAEPESK 1105


>SB_57953| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 712

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = -2

Query: 493 HRRVKEQIDLVVQRDRHHEVVLEI 422
           H+++++Q DL V RD  H+V+LE+
Sbjct: 568 HKKIRQQHDLNVTRDLVHDVMLEL 591


>SB_54350| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 924

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -2

Query: 262 IKSEIIQKDFDSKIEELNPKQGSDSEPVETLEAGLKTDDSETLEVPEESQ 113
           I  EII  D+D ++ EL       SE V   E  L++ D+  L VPE S+
Sbjct: 101 ILPEIIYSDYDEEMRELLAAMTESSESV--TENELESIDNTGLMVPEVSK 148


>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
          Length = 1997

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
 Frame = -2

Query: 262  IKSEIIQKDFDSKIEELNPKQGSDSE-PVETLEAGLKTDDSE---TLEVPEESQLXXXXX 95
            + +E IQKD + K+EEL    G   +  ++ LE  +K  + E     +   ESQ      
Sbjct: 1820 MSAERIQKDLEMKLEELEAAGGKALKVQIKKLEQRVKELERELDNEAKRSAESQKLAKKN 1879

Query: 94   XXXXXXXKHVADEIQKALKELEESNRKKKKK 2
                   +  ADE QK L   +E++ +   K
Sbjct: 1880 ERRMKEIQFQADEDQKNLARAQENSDRMNNK 1910


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,975,190
Number of Sequences: 59808
Number of extensions: 292096
Number of successful extensions: 754
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)