Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K01
         (807 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.0  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   6.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/59 (25%), Positives = 22/59 (37%)
 Frame = +3

Query: 369 PTXNGHAPPPTESRKSC*SVNPSGVRAW*DFPC*VKLSRRLHSWWCPSVNSFKFQLCNH 545
           P  N H    T   K C  V  + +  W      ++  +RL    CP +  +K  L  H
Sbjct: 191 PKVNSHGKIKTFKCKQCDFVAITKLEQWNHSKVHIREDKRLTCPKCPFITEYKHHLEYH 249


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +2

Query: 407 KKELLICQSFRCPGLVRFPVLSQIKPQAPLLVVPF-RQFL*VSAL-QPYSPRXSKIFGF 577
           K  L +   ++  G+++FP+ +     +  L +PF   F  +S +   YS + S IF +
Sbjct: 50  KTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKY 108


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +2

Query: 407 KKELLICQSFRCPGLVRFPVLSQIKPQAPLLVVPF-RQFL*VSAL-QPYSPRXSKIFGF 577
           K  L +   ++  G+++FP+ +     +  L +PF   F  +S +   YS + S IF +
Sbjct: 6   KTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKY 64


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 352 PDKSLHQLXTAMHHHPPNQERAVNLSIL 435
           P +S H+L T +  +PPN   AV  S L
Sbjct: 44  PLESNHKLVTFILKNPPNLNPAVQGSSL 71


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 540 NHTPPGSPKSLVSRKL 587
           N+ PPG P S VS  L
Sbjct: 533 NNQPPGGPSSHVSAVL 548


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,833
Number of Sequences: 336
Number of extensions: 2998
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)